BLASTX nr result

ID: Scutellaria23_contig00013962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00013962
         (1537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative...   607   e-171
emb|CBI28088.3| unnamed protein product [Vitis vinifera]              603   e-170
ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-...   603   e-170
emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]   601   e-169
ref|XP_002331157.1| predicted protein [Populus trichocarpa] gi|2...   597   e-168

>ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative [Ricinus communis]
            gi|223546788|gb|EEF48286.1| DNA mismatch repair protein
            MSH6-2, putative [Ricinus communis]
          Length = 1089

 Score =  607 bits (1564), Expect = e-171
 Identities = 300/423 (70%), Positives = 359/423 (84%), Gaps = 2/423 (0%)
 Frame = -2

Query: 1536 RIGMHMLMFLEKDEVVTASLSKVVFLPVLSGSEGLDKSLSQFEAAVDTEFPNYQDHNVTD 1357
            RIG+ +L+ L+K++ + +  SK   LP L+GS GLDK LSQFEAAVD+EFPNYQ+H+VTD
Sbjct: 666  RIGIDLLLLLQKEDRIISLFSKNFKLPELNGSAGLDKFLSQFEAAVDSEFPNYQNHDVTD 725

Query: 1356 SEAETLTILMELFVEKATQWSQMIHAINCIDVLRSFAITAISSSGVMCRPTVLPQPKFTN 1177
            SEAETL +L+ELF+EKA+ WS++I AINCIDVLRSFAITA  SSG M RP +LP+ K + 
Sbjct: 726  SEAETLFVLIELFIEKASCWSEVIQAINCIDVLRSFAITASMSSGSMSRPVILPESKSSM 785

Query: 1176 SFMEPTCPILHMKGLWHPYALGENGGLPVPNDINLGEDGSSCSPGTLLLTGPNMGGKSTL 997
               +   P+L ++GLWHP+ALGENGG+PVPND++LGED     P TLLLTGPNMGGKSTL
Sbjct: 786  FGQDKGGPVLKIRGLWHPFALGENGGMPVPNDLHLGEDLDGYLPRTLLLTGPNMGGKSTL 845

Query: 996  LRATCLAIILAQLGCYVPCETCTLSVVDIIFTRLGATDRIMTGESTFLIECTETASVLQN 817
            LRATCLA+ILAQLGC+VP E C LS+VDIIFTRLGATDRIMTGESTF IECTETASVL+N
Sbjct: 846  LRATCLAVILAQLGCFVPSEKCVLSLVDIIFTRLGATDRIMTGESTFFIECTETASVLKN 905

Query: 816  ATQNSLVILDELGRGTSTFDGYAIAYAVFRHLVESVNCRLLFATHYHPLTKEFASHPRVN 637
            ATQ+SLV+LDELGRGTSTFDGYAIAYAVFRHLVE VNCRLLFATHYHPLTKEF S+PRV 
Sbjct: 906  ATQDSLVLLDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYHPLTKEFGSNPRVI 965

Query: 636  LQHMACCFDSDSKMSSQNTRKLVFLYRLASGACPESYGMQIALMAGIPSSVVQAASEAGQ 457
            LQHMAC F S S+  S++ + LVFLYRLASGACPESYG+Q+A+MAGIP +VV+AAS+AGQ
Sbjct: 966  LQHMACAFKSKSESYSESDQDLVFLYRLASGACPESYGLQVAVMAGIPENVVEAASQAGQ 1025

Query: 456  VMKEIVGESFKSSEQRQNFSTLHEEWLKSLLSISETKETDFD--DDAFDSLFCLWHELKR 283
            VMK+ +GESF+SSE+R  FSTLHE+ LK+LLS ++    +FD  DD +D+LFCLWHELK 
Sbjct: 1026 VMKKSIGESFRSSEKRSEFSTLHEDGLKTLLSATQIGGCNFDNTDDVYDTLFCLWHELKN 1085

Query: 282  SFK 274
            S++
Sbjct: 1086 SYQ 1088


>emb|CBI28088.3| unnamed protein product [Vitis vinifera]
          Length = 1126

 Score =  603 bits (1555), Expect = e-170
 Identities = 291/419 (69%), Positives = 353/419 (84%)
 Frame = -2

Query: 1536 RIGMHMLMFLEKDEVVTASLSKVVFLPVLSGSEGLDKSLSQFEAAVDTEFPNYQDHNVTD 1357
            R+ + +L+ L+K+  +  SLS+V+ LP+LSGS G+DK L+QFEAA+D++FPNY++H+VTD
Sbjct: 692  RVAIDLLVQLQKEGHIMPSLSEVLKLPMLSGSSGVDKLLTQFEAAIDSDFPNYENHDVTD 751

Query: 1356 SEAETLTILMELFVEKATQWSQMIHAINCIDVLRSFAITAISSSGVMCRPTVLPQPKFTN 1177
            S+AE L+IL+ELF+EK TQW Q+IHAIN IDVLRSFA+ A  S G M RP +LP  +   
Sbjct: 752  SDAEILSILIELFIEKTTQWLQVIHAINHIDVLRSFAVIANFSCGAMSRPVILPHSEPAT 811

Query: 1176 SFMEPTCPILHMKGLWHPYALGENGGLPVPNDINLGEDGSSCSPGTLLLTGPNMGGKSTL 997
               E   P+L ++GLWHP+A+GENGGLPVPNDI+LGED     P TLLLTGPNMGGKSTL
Sbjct: 812  LSGETRGPLLKIRGLWHPFAIGENGGLPVPNDIHLGEDTDGNHPRTLLLTGPNMGGKSTL 871

Query: 996  LRATCLAIILAQLGCYVPCETCTLSVVDIIFTRLGATDRIMTGESTFLIECTETASVLQN 817
            LRATCLA+ILAQLG YVPC+ C LS+VD++FTRLGATDRIMTGESTF IECTETASVL+N
Sbjct: 872  LRATCLAVILAQLGSYVPCKMCILSLVDVVFTRLGATDRIMTGESTFFIECTETASVLRN 931

Query: 816  ATQNSLVILDELGRGTSTFDGYAIAYAVFRHLVESVNCRLLFATHYHPLTKEFASHPRVN 637
            ATQ+SLV+LDELGRGTSTFDGYAIAYAVFRHLVE VNCRLLFATHYHPLTKEFASHP V 
Sbjct: 932  ATQDSLVLLDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYHPLTKEFASHPHVT 991

Query: 636  LQHMACCFDSDSKMSSQNTRKLVFLYRLASGACPESYGMQIALMAGIPSSVVQAASEAGQ 457
            LQHMAC F+   + SS   ++LVFLY+L SGACPESYG+Q+ALMAG+P  VV+AAS AG+
Sbjct: 992  LQHMACTFNLKGEKSSGGEQELVFLYQLTSGACPESYGLQVALMAGVPKEVVEAASTAGR 1051

Query: 456  VMKEIVGESFKSSEQRQNFSTLHEEWLKSLLSISETKETDFDDDAFDSLFCLWHELKRS 280
            +MK+ +GESF++SEQR  FSTLHEEWLK+LL++S   E +FDDDA+D+LFCLWHE+K S
Sbjct: 1052 MMKQSIGESFRTSEQRSEFSTLHEEWLKALLTVSRLGEHNFDDDAWDTLFCLWHEMKSS 1110


>ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-2 [Vitis vinifera]
          Length = 1122

 Score =  603 bits (1555), Expect = e-170
 Identities = 291/419 (69%), Positives = 353/419 (84%)
 Frame = -2

Query: 1536 RIGMHMLMFLEKDEVVTASLSKVVFLPVLSGSEGLDKSLSQFEAAVDTEFPNYQDHNVTD 1357
            R+ + +L+ L+K+  +  SLS+V+ LP+LSGS G+DK L+QFEAA+D++FPNY++H+VTD
Sbjct: 688  RVAIDLLVQLQKEGHIMPSLSEVLKLPMLSGSSGVDKLLTQFEAAIDSDFPNYENHDVTD 747

Query: 1356 SEAETLTILMELFVEKATQWSQMIHAINCIDVLRSFAITAISSSGVMCRPTVLPQPKFTN 1177
            S+AE L+IL+ELF+EK TQW Q+IHAIN IDVLRSFA+ A  S G M RP +LP  +   
Sbjct: 748  SDAEILSILIELFIEKTTQWLQVIHAINHIDVLRSFAVIANFSCGAMSRPVILPHSEPAT 807

Query: 1176 SFMEPTCPILHMKGLWHPYALGENGGLPVPNDINLGEDGSSCSPGTLLLTGPNMGGKSTL 997
               E   P+L ++GLWHP+A+GENGGLPVPNDI+LGED     P TLLLTGPNMGGKSTL
Sbjct: 808  LSGETRGPLLKIRGLWHPFAIGENGGLPVPNDIHLGEDTDGNHPRTLLLTGPNMGGKSTL 867

Query: 996  LRATCLAIILAQLGCYVPCETCTLSVVDIIFTRLGATDRIMTGESTFLIECTETASVLQN 817
            LRATCLA+ILAQLG YVPC+ C LS+VD++FTRLGATDRIMTGESTF IECTETASVL+N
Sbjct: 868  LRATCLAVILAQLGSYVPCKMCILSLVDVVFTRLGATDRIMTGESTFFIECTETASVLRN 927

Query: 816  ATQNSLVILDELGRGTSTFDGYAIAYAVFRHLVESVNCRLLFATHYHPLTKEFASHPRVN 637
            ATQ+SLV+LDELGRGTSTFDGYAIAYAVFRHLVE VNCRLLFATHYHPLTKEFASHP V 
Sbjct: 928  ATQDSLVLLDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYHPLTKEFASHPHVT 987

Query: 636  LQHMACCFDSDSKMSSQNTRKLVFLYRLASGACPESYGMQIALMAGIPSSVVQAASEAGQ 457
            LQHMAC F+   + SS   ++LVFLY+L SGACPESYG+Q+ALMAG+P  VV+AAS AG+
Sbjct: 988  LQHMACTFNLKGEKSSGGEQELVFLYQLTSGACPESYGLQVALMAGVPKEVVEAASTAGR 1047

Query: 456  VMKEIVGESFKSSEQRQNFSTLHEEWLKSLLSISETKETDFDDDAFDSLFCLWHELKRS 280
            +MK+ +GESF++SEQR  FSTLHEEWLK+LL++S   E +FDDDA+D+LFCLWHE+K S
Sbjct: 1048 MMKQSIGESFRTSEQRSEFSTLHEEWLKALLTVSRLGEHNFDDDAWDTLFCLWHEMKSS 1106


>emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]
          Length = 1090

 Score =  601 bits (1550), Expect = e-169
 Identities = 291/419 (69%), Positives = 351/419 (83%)
 Frame = -2

Query: 1536 RIGMHMLMFLEKDEVVTASLSKVVFLPVLSGSEGLDKSLSQFEAAVDTEFPNYQDHNVTD 1357
            R+ + +L+ L+K+  +  SLS+V+ LP+LSGS G+DK L+QFEAA+D++FPNY++H+VTD
Sbjct: 656  RVAIXLLVXLQKEGHIMPSLSEVLKLPMLSGSSGVDKLLTQFEAAIDSDFPNYENHDVTD 715

Query: 1356 SEAETLTILMELFVEKATQWSQMIHAINCIDVLRSFAITAISSSGVMCRPTVLPQPKFTN 1177
            S+AE L+IL+ELF+EK TQW Q+IHAIN IDVLRSFA+ A  S G M RP +LP  +   
Sbjct: 716  SDAEILSILIELFIEKTTQWLQVIHAINHIDVLRSFAVIANFSCGAMSRPVILPHSEPAT 775

Query: 1176 SFMEPTCPILHMKGLWHPYALGENGGLPVPNDINLGEDGSSCSPGTLLLTGPNMGGKSTL 997
               E   P+L + GLWHP+A+GENGGLPVPNDI+LGED     P TLLLTGPNMGGKSTL
Sbjct: 776  LSGETRGPLLKIXGLWHPFAIGENGGLPVPNDIHLGEDTDGNHPRTLLLTGPNMGGKSTL 835

Query: 996  LRATCLAIILAQLGCYVPCETCTLSVVDIIFTRLGATDRIMTGESTFLIECTETASVLQN 817
            LRATCLA+ILAQLG YVPC+ C LS+VD++FTRLGATDRIMTGESTF IECTETASVL+N
Sbjct: 836  LRATCLAVILAQLGSYVPCKMCILSLVDVVFTRLGATDRIMTGESTFFIECTETASVLRN 895

Query: 816  ATQNSLVILDELGRGTSTFDGYAIAYAVFRHLVESVNCRLLFATHYHPLTKEFASHPRVN 637
            ATQ+SLV+LDELGRGTSTFDGYAIAYAVFRHLVE VNCRLLFATHYHPLTKEFASHP V 
Sbjct: 896  ATQDSLVLLDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYHPLTKEFASHPHVT 955

Query: 636  LQHMACCFDSDSKMSSQNTRKLVFLYRLASGACPESYGMQIALMAGIPSSVVQAASEAGQ 457
            LQHMAC F+   + SS   ++LVFLY+L SGACPESYG+Q+ALMAG P  VV+AAS AG+
Sbjct: 956  LQHMACTFNLKGEKSSGGEQELVFLYQLTSGACPESYGLQVALMAGXPKEVVEAASTAGR 1015

Query: 456  VMKEIVGESFKSSEQRQNFSTLHEEWLKSLLSISETKETDFDDDAFDSLFCLWHELKRS 280
            +MK+ +GESF++SEQR  FSTLHEEWLK+LL++S   E +FDDDA+D+LFCLWHE+K S
Sbjct: 1016 MMKQSIGESFRTSEQRSEFSTLHEEWLKALLTVSRLGEHNFDDDAWDTLFCLWHEMKSS 1074


>ref|XP_002331157.1| predicted protein [Populus trichocarpa] gi|222873240|gb|EEF10371.1|
            predicted protein [Populus trichocarpa]
          Length = 1107

 Score =  597 bits (1540), Expect = e-168
 Identities = 297/422 (70%), Positives = 348/422 (82%), Gaps = 1/422 (0%)
 Frame = -2

Query: 1536 RIGMHMLMFLEKDEVVTASLSKVVFLPVLSGSEGLDKSLSQFEAAVDTEFPNYQDHNVTD 1357
            R GM +L+ L K+E + +SLSK   LP L GS GL+K L QFEAAVD+EFPNYQ+ +VTD
Sbjct: 680  RNGMDLLLLLLKEEQLISSLSKNFKLPELLGSNGLEKFLVQFEAAVDSEFPNYQNRDVTD 739

Query: 1356 SEAETLTILMELFVEKATQWSQMIHAINCIDVLRSFAITAISSSGVMCRPTVLPQPKFTN 1177
            SEA  L++L+ELF+EKA QW ++IHAINCIDVLRSFA+TA  S G MCRP +LP  K  +
Sbjct: 740  SEAGMLSVLIELFIEKAAQWGEVIHAINCIDVLRSFAVTASMSCGAMCRPVILPDSKSIS 799

Query: 1176 SFMEPTCPILHMKGLWHPYALGENGGLPVPNDINLGEDGSSCSPGTLLLTGPNMGGKSTL 997
                   P+L +KGLWHP+ALGENG LPVPND+ LGED  S  P T+LLTGPNMGGKSTL
Sbjct: 800  FCEGEGGPVLKIKGLWHPFALGENG-LPVPNDVFLGEDSDSQHPRTVLLTGPNMGGKSTL 858

Query: 996  LRATCLAIILAQLGCYVPCETCTLSVVDIIFTRLGATDRIMTGESTFLIECTETASVLQN 817
            LRATCLA+ILAQLGC+VP E C LS+ DIIFTRLGATDRIMTGESTF IECTETASVLQN
Sbjct: 859  LRATCLAVILAQLGCFVPGEKCVLSLADIIFTRLGATDRIMTGESTFFIECTETASVLQN 918

Query: 816  ATQNSLVILDELGRGTSTFDGYAIAYAVFRHLVESVNCRLLFATHYHPLTKEFASHPRVN 637
            ATQ+SLV+LDELGRGTST+DGYAIAYAVFRHLVE +NCRLLFATHYHPLTKEFASHP V+
Sbjct: 919  ATQDSLVLLDELGRGTSTYDGYAIAYAVFRHLVEKINCRLLFATHYHPLTKEFASHPHVS 978

Query: 636  LQHMACCFDSDSKMSSQNTRKLVFLYRLASGACPESYGMQIALMAGIPSSVVQAASEAGQ 457
            LQ+MAC F S  +  S++ R LVFLYRLASGACP SYG+Q+A MAGIP  VV+AAS AGQ
Sbjct: 979  LQYMACAFKSKPESYSKSDRDLVFLYRLASGACPGSYGLQVATMAGIPEHVVEAASHAGQ 1038

Query: 456  VMKEIVGESFKSSEQRQNFSTLHEEWLKSLLSISETKETDF-DDDAFDSLFCLWHELKRS 280
            +MK   GESFKSSE+R  FSTLHEEWLK+L+++S  ++ +F DDD +D+LFCLWHELK S
Sbjct: 1039 LMKNSTGESFKSSERRSEFSTLHEEWLKTLVNVSRIRDCNFDDDDVYDTLFCLWHELKSS 1098

Query: 279  FK 274
            ++
Sbjct: 1099 YE 1100


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