BLASTX nr result

ID: Scutellaria23_contig00013898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00013898
         (1116 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002887286.1| hypothetical protein ARALYDRAFT_476144 [Arab...    80   7e-13
ref|NP_564986.1| ribosomal protein L7/L12 domain-containing prot...    80   1e-12
ref|XP_004145130.1| PREDICTED: 54S ribosomal protein L12, mitoch...    79   3e-12
ref|XP_003546827.1| PREDICTED: 50S ribosomal protein L7/L12-like...    79   3e-12
ref|NP_001241576.1| uncharacterized protein LOC100794355 [Glycin...    79   3e-12

>ref|XP_002887286.1| hypothetical protein ARALYDRAFT_476144 [Arabidopsis lyrata subsp.
           lyrata] gi|297333127|gb|EFH63545.1| hypothetical protein
           ARALYDRAFT_476144 [Arabidopsis lyrata subsp. lyrata]
          Length = 204

 Score = 80.5 bits (197), Expect = 7e-13
 Identities = 49/103 (47%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
 Frame = +3

Query: 309 MSLIGKIRCHLSHGSFASVVVSCSLKYIGATRHYAEPAT----SEEVERDQERLVADYDP 476
           MSL+ + R HLS  S    ++S     IG  R Y +PA      EE E DQ +L  DYDP
Sbjct: 1   MSLVLRFRQHLSQTSSRLSLIS----RIGGYRSYTQPAKIEDEEEEEEFDQRKLPTDYDP 56

Query: 477 ANSDSKELHSHPSERVLRLIDEISELTVAESAELGIILMGKKG 605
           A  D  E  S P++RV RL+DEIS LT++E +ELG I+M KKG
Sbjct: 57  ATFDPTEHRSPPTDRVFRLVDEISSLTLSEISELGKIIMKKKG 99


>ref|NP_564986.1| ribosomal protein L7/L12 domain-containing protein [Arabidopsis
           thaliana] gi|334183805|ref|NP_001185360.1| ribosomal
           protein L7/L12 domain-containing protein [Arabidopsis
           thaliana] gi|13430422|gb|AAK25833.1|AF360123_1 unknown
           protein [Arabidopsis thaliana] gi|2194123|gb|AAB61098.1|
           Similar to Secale chloroplast ribosomal protein L12
           (gb|SCL121A). EST gb|H36579 comes from this gene
           [Arabidopsis thaliana] gi|15293181|gb|AAK93701.1|
           unknown protein [Arabidopsis thaliana]
           gi|332196909|gb|AEE35030.1| ribosomal protein L7/L12
           domain-containing protein [Arabidopsis thaliana]
           gi|332196910|gb|AEE35031.1| ribosomal protein L7/L12
           domain-containing protein [Arabidopsis thaliana]
          Length = 208

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 49/102 (48%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
 Frame = +3

Query: 309 MSLIGKIRCHLSHGSFASVVVSCSLKYIGATRHYAEPAT---SEEVERDQERLVADYDPA 479
           MSL+ + R HLS  S    ++S     IG  R Y +PA     EE E DQ +L  DYDPA
Sbjct: 1   MSLVLRFRQHLSQTSSRLSLLS----RIGGYRSYTQPAKIEDEEEEEFDQRKLPTDYDPA 56

Query: 480 NSDSKELHSHPSERVLRLIDEISELTVAESAELGIILMGKKG 605
             D  E  S P++RV RL+DEIS LT+ E +ELG I+M KKG
Sbjct: 57  TFDPTEHRSPPTDRVFRLVDEISSLTLLEISELGSIIMKKKG 98


>ref|XP_004145130.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449454778|ref|XP_004145131.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
           gi|449472279|ref|XP_004153545.1| PREDICTED: 54S
           ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449472282|ref|XP_004153546.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
           gi|449503353|ref|XP_004161960.1| PREDICTED: 54S
           ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449503355|ref|XP_004161961.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
          Length = 214

 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 51/108 (47%), Positives = 64/108 (59%), Gaps = 9/108 (8%)
 Frame = +3

Query: 309 MSLIGKIRCHLSHGSFASVVVSCS-----LKYIGATRHYAEPAT----SEEVERDQERLV 461
           M L+ +I  HL    FA+ + S +     L   G  R+YA+P+      EEVE DQ RL 
Sbjct: 1   MRLVSRIS-HLLPNVFANTIRSSTVALNPLNRNGLHRNYAQPSRIEEEEEEVEIDQRRLP 59

Query: 462 ADYDPANSDSKELHSHPSERVLRLIDEISELTVAESAELGIILMGKKG 605
           ADYDPAN D  E  S P++RV RL+DEIS LT+ E AE+  ILM K G
Sbjct: 60  ADYDPANFDPTEHRSPPTDRVFRLVDEISGLTLVEVAEMSSILMKKLG 107


>ref|XP_003546827.1| PREDICTED: 50S ribosomal protein L7/L12-like [Glycine max]
          Length = 217

 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 48/113 (42%), Positives = 64/113 (56%), Gaps = 12/113 (10%)
 Frame = +3

Query: 309 MSLIGKIRCHLSHG----SFASVVVSCSLKYIGA-TRHYAEPATSEEVERD-------QE 452
           MSL+ +IR +L +G         VV  +   +   +RH+ +PA  EE E D       Q 
Sbjct: 1   MSLLSRIRHYLPNGLCRQPLHPTVVRLNASNLNVFSRHFGQPARKEEEEEDVEEVEINQR 60

Query: 453 RLVADYDPANSDSKELHSHPSERVLRLIDEISELTVAESAELGIILMGKKGFK 611
            L AD+DPA  D  +    PSERV RL+DE++ LTVAE+AELG+ LM K G K
Sbjct: 61  SLPADFDPATFDPNDHRGPPSERVFRLVDEVASLTVAEAAELGLTLMKKMGVK 113


>ref|NP_001241576.1| uncharacterized protein LOC100794355 [Glycine max]
           gi|255646953|gb|ACU23946.1| unknown [Glycine max]
          Length = 216

 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 51/112 (45%), Positives = 65/112 (58%), Gaps = 11/112 (9%)
 Frame = +3

Query: 309 MSLIGKIRCHLSHG----SFASVVVSCSLKYIGA-TRHYAEPATSEE------VERDQER 455
           MSL+ +IR +L  G         VV  +   +   +RH+ +PA  EE      VE DQ+ 
Sbjct: 1   MSLLLRIRHYLPKGLCRQPLHPTVVRLNASNLNVFSRHFGQPARKEEEDDVEEVEIDQKC 60

Query: 456 LVADYDPANSDSKELHSHPSERVLRLIDEISELTVAESAELGIILMGKKGFK 611
           L AD+DPA  D  +    PSERV RLIDEI+ LTVAE+ ELG+ILM K G K
Sbjct: 61  LPADFDPATFDPNDHRGPPSERVFRLIDEIASLTVAEAGELGLILMKKMGVK 112


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