BLASTX nr result

ID: Scutellaria23_contig00013823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00013823
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602361.1| Polyadenylate-binding protein [Medicago trun...    92   9e-17
gb|AFK34352.1| unknown [Medicago truncatula]                           79   1e-12
ref|XP_003602357.1| Splicing factor, arginine/serine-rich [Medic...    79   1e-12
ref|XP_003526755.1| PREDICTED: uncharacterized protein LOC100800...    78   2e-12
ref|XP_003526754.1| PREDICTED: uncharacterized protein LOC100799...    77   5e-12

>ref|XP_003602361.1| Polyadenylate-binding protein [Medicago truncatula]
           gi|355491409|gb|AES72612.1| Polyadenylate-binding
           protein [Medicago truncatula]
          Length = 384

 Score = 92.4 bits (228), Expect = 9e-17
 Identities = 66/168 (39%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
 Frame = +3

Query: 261 MAVVENARVNAMTSSNRDGLQNDVVA-DHRHNQQSTKPATNSQKSTTPTDQSY-----HL 422
           MAV EN  V     S+ + L N VV+ D     + +KP T+   +T   + +      H 
Sbjct: 1   MAVAEN--VGTKIDSSSENLDNSVVSSDSTEVVEKSKPKTDQNLNTNSVNTNVVGVINHQ 58

Query: 423 IQQKISNGHHQLQQHAVN---GNGVSQEKEVNG-DDDGGEGFKREMRDLEEMLSKLNPMA 590
            Q  + NG+H    H ++   GNGV  +  V+G   +GGE FKREMRDLEE+LSKLNPMA
Sbjct: 59  QQDSVPNGNHGFIAHQMSQMHGNGVQNQHLVDGYGGNGGESFKREMRDLEELLSKLNPMA 118

Query: 591 KEFVPPSHASN-----VAGVNHGLVVXXXXXXXXXXXFGYNANGFLFQ 719
           +EFVPPS  +N      AG N G              FGY  N F+ Q
Sbjct: 119 EEFVPPSLVTNYHGYLAAGPNAG--------------FGYPNNNFMLQ 152


>gb|AFK34352.1| unknown [Medicago truncatula]
          Length = 376

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 60/168 (35%), Positives = 74/168 (44%), Gaps = 10/168 (5%)
 Frame = +3

Query: 261 MAVVENARVNAMTSS-NRDGLQNDVVADHRHNQQSTKPATNSQKSTTPTDQSYHLIQQKI 437
           MAV EN      +SS N D   N  V+      + +KP T+   +        H      
Sbjct: 1   MAVAENVGAKIGSSSQNLDNNNNHAVSSDSTEVEKSKPRTDQDVNNNSVFNHQHQNGNYS 60

Query: 438 SNGHHQLQQHA---------VNGNGVSQEKEVNGDDDGGEGFKREMRDLEEMLSKLNPMA 590
              H   Q HA         VN +G       NG++ GGE FKREMRDLEE+LSKLNPMA
Sbjct: 61  FKTHQMGQMHANGVQNHQFVVNNDGYVMNGLRNGEN-GGESFKREMRDLEELLSKLNPMA 119

Query: 591 KEFVPPSHASNVAGVNHGLVVXXXXXXXXXXXFGYNANGFLFQQLMNS 734
           +EFVPPS  +     NHG +            FGY  N  L     N+
Sbjct: 120 EEFVPPSLTN-----NHGYLA-----AGPAAGFGYPNNFILLNNYANA 157


>ref|XP_003602357.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
           gi|355491405|gb|AES72608.1| Splicing factor,
           arginine/serine-rich [Medicago truncatula]
          Length = 384

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 60/168 (35%), Positives = 74/168 (44%), Gaps = 10/168 (5%)
 Frame = +3

Query: 261 MAVVENARVNAMTSS-NRDGLQNDVVADHRHNQQSTKPATNSQKSTTPTDQSYHLIQQKI 437
           MAV EN      +SS N D   N  V+      + +KP T+   +        H      
Sbjct: 1   MAVAENVGAKIGSSSQNLDNNNNHAVSSDSTEVEKSKPRTDQDVNNNSVFNHQHQNGNYS 60

Query: 438 SNGHHQLQQHA---------VNGNGVSQEKEVNGDDDGGEGFKREMRDLEEMLSKLNPMA 590
              H   Q HA         VN +G       NG++ GGE FKREMRDLEE+LSKLNPMA
Sbjct: 61  FKTHQMGQMHANGVQNHQFVVNNDGYVMNGLRNGEN-GGESFKREMRDLEELLSKLNPMA 119

Query: 591 KEFVPPSHASNVAGVNHGLVVXXXXXXXXXXXFGYNANGFLFQQLMNS 734
           +EFVPPS  +     NHG +            FGY  N  L     N+
Sbjct: 120 EEFVPPSLTN-----NHGYLA-----AGPAAGFGYPNNFILLNNYANA 157


>ref|XP_003526755.1| PREDICTED: uncharacterized protein LOC100800126 [Glycine max]
          Length = 369

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 68/188 (36%), Positives = 86/188 (45%), Gaps = 20/188 (10%)
 Frame = +3

Query: 261 MAVVENARVNAMTSSNRDGLQNDVVADHRHNQQSTKPATNSQKSTTPTDQSYHLIQQKIS 440
           MAVVEN  V A   S+   L+N VV+           +   +KS T  DQ        ++
Sbjct: 1   MAVVEN--VGAKIGSSSQSLENGVVS---------ADSGEVEKSKTRGDQD-------MN 42

Query: 441 NG--HHQLQQHAVNG-----NGVSQEKEVNG-------------DDDGGEGFKREMRDLE 560
           NG  +HQ  Q  V G     NG    K  NG             +++GGE FKR+MRDLE
Sbjct: 43  NGVFNHQQHQETVPGTMPVPNGNFSYKHANGVNNDGYGMNGVMSEENGGESFKRDMRDLE 102

Query: 561 EMLSKLNPMAKEFVPPSHASNVAGVNHGLVVXXXXXXXXXXXFGYNANGFLFQQLMNSGA 740
           E+LSKLNPMA+EFVPPS A+      HGL+            FGY  N  L     N+  
Sbjct: 103 ELLSKLNPMAEEFVPPSLAN-----THGLLA------GPNAGFGYTNNFILPNNYGNTNG 151

Query: 741 PPENSFRR 764
              N  R+
Sbjct: 152 QTNNRRRK 159


>ref|XP_003526754.1| PREDICTED: uncharacterized protein LOC100799585 [Glycine max]
          Length = 378

 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 57/164 (34%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
 Frame = +3

Query: 261 MAVVENARVNAMTSSNRDGLQNDVVADHRHNQQSTKPATNSQKSTTPTDQSYHLIQQKI- 437
           MAV EN  V A   S+   L+N VV+      + +KP + S       +      Q ++ 
Sbjct: 1   MAVAEN--VGAKIGSSSQNLENSVVSSDSGEVEKSKPRSGSINDDQKLNNGVFNHQDRVP 58

Query: 438 -------SNGHHQLQQHAVNGNGVSQE----KEVNGDDDGGEGFKREMRDLEEMLSKLNP 584
                  SN ++  Q   ++ NGV+ +      V   ++ GE FKR+MRDLEE+LSKLNP
Sbjct: 59  GTMPVPNSNYNYNAQMGQMHANGVNNDGYGMNGVMSGENEGESFKRDMRDLEELLSKLNP 118

Query: 585 MAKEFVPPSHASN---VAGVNHGLVVXXXXXXXXXXXFGYNANG 707
           MA+EFVPPS ++    +AG   G              FG NANG
Sbjct: 119 MAEEFVPPSLSNTHGYLAGPGAGAGFGYPNNFILLNNFG-NANG 161


Top