BLASTX nr result

ID: Scutellaria23_contig00013724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00013724
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002871691.1| structural maintenance of chromosomes family...   256   4e-66
ref|XP_002517770.1| structural maintenance of chromosomes 5 smc5...   254   1e-65
ref|NP_001056521.1| Os05g0596600 [Oryza sativa Japonica Group] g...   252   4e-65
gb|EEE64923.1| hypothetical protein OsJ_19783 [Oryza sativa Japo...   252   4e-65
emb|CAD59412.1| SMC5 protein [Oryza sativa]                           252   4e-65

>ref|XP_002871691.1| structural maintenance of chromosomes family protein [Arabidopsis
            lyrata subsp. lyrata] gi|297317528|gb|EFH47950.1|
            structural maintenance of chromosomes family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1052

 Score =  256 bits (653), Expect = 4e-66
 Identities = 121/143 (84%), Positives = 132/143 (92%)
 Frame = +2

Query: 2    DERGTDFDQYGILVKVKFRQTGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVD 181
            DER TDFDQYGI +KVKFR++GQLQVLS+HHQSGGERSVSTILYLVSLQDLTNCPFRVVD
Sbjct: 909  DERDTDFDQYGIHIKVKFRESGQLQVLSSHHQSGGERSVSTILYLVSLQDLTNCPFRVVD 968

Query: 182  EINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPNLEYSDACSILTVMNGPWIEQ 361
            EINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLP LEYS+ACSIL +MNGPWIEQ
Sbjct: 969  EINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPELEYSEACSILNIMNGPWIEQ 1028

Query: 362  PSKVWSGGESWASIRTQMEENCC 430
            PSKVWS G+SW ++  + E + C
Sbjct: 1029 PSKVWSLGDSWGNLMRRTEASQC 1051


>ref|XP_002517770.1| structural maintenance of chromosomes 5 smc5, putative [Ricinus
            communis] gi|223543042|gb|EEF44577.1| structural
            maintenance of chromosomes 5 smc5, putative [Ricinus
            communis]
          Length = 1057

 Score =  254 bits (649), Expect = 1e-65
 Identities = 119/134 (88%), Positives = 127/134 (94%)
 Frame = +2

Query: 2    DERGTDFDQYGILVKVKFRQTGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVD 181
            DE   DFDQYGIL+KVKFRQ GQLQVLSAHHQSGGERSVST+LYLVSLQDLTNCPFRVVD
Sbjct: 917  DEHDKDFDQYGILIKVKFRQAGQLQVLSAHHQSGGERSVSTVLYLVSLQDLTNCPFRVVD 976

Query: 182  EINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPNLEYSDACSILTVMNGPWIEQ 361
            EINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLP+LEYS+ACSIL +MNGPWIEQ
Sbjct: 977  EINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGPWIEQ 1036

Query: 362  PSKVWSGGESWASI 403
            P+KVWS GESW ++
Sbjct: 1037 PAKVWSSGESWRAV 1050


>ref|NP_001056521.1| Os05g0596600 [Oryza sativa Japonica Group] gi|57900674|gb|AAW57799.1|
            putative SMC5 protein [Oryza sativa Japonica Group]
            gi|113580072|dbj|BAF18435.1| Os05g0596600 [Oryza sativa
            Japonica Group] gi|215768112|dbj|BAH00341.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 1065

 Score =  252 bits (644), Expect = 4e-65
 Identities = 118/134 (88%), Positives = 127/134 (94%)
 Frame = +2

Query: 2    DERGTDFDQYGILVKVKFRQTGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVD 181
            DE G DF+QYGIL+KVKFRQTGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVD
Sbjct: 926  DEHGLDFEQYGILIKVKFRQTGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVD 985

Query: 182  EINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPNLEYSDACSILTVMNGPWIEQ 361
            EINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLP+LEYSDACSIL +MNGPWIE+
Sbjct: 986  EINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSDACSILNIMNGPWIEK 1045

Query: 362  PSKVWSGGESWASI 403
            P+K WS G+ W ++
Sbjct: 1046 PAKAWSTGDCWRTV 1059


>gb|EEE64923.1| hypothetical protein OsJ_19783 [Oryza sativa Japonica Group]
          Length = 1103

 Score =  252 bits (644), Expect = 4e-65
 Identities = 118/134 (88%), Positives = 127/134 (94%)
 Frame = +2

Query: 2    DERGTDFDQYGILVKVKFRQTGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVD 181
            DE G DF+QYGIL+KVKFRQTGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVD
Sbjct: 926  DEHGLDFEQYGILIKVKFRQTGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVD 985

Query: 182  EINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPNLEYSDACSILTVMNGPWIEQ 361
            EINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLP+LEYSDACSIL +MNGPWIE+
Sbjct: 986  EINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSDACSILNIMNGPWIEK 1045

Query: 362  PSKVWSGGESWASI 403
            P+K WS G+ W ++
Sbjct: 1046 PAKAWSTGDCWRTV 1059


>emb|CAD59412.1| SMC5 protein [Oryza sativa]
          Length = 1056

 Score =  252 bits (644), Expect = 4e-65
 Identities = 118/134 (88%), Positives = 127/134 (94%)
 Frame = +2

Query: 2    DERGTDFDQYGILVKVKFRQTGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVD 181
            DE G DF+QYGIL+KVKFRQTGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVD
Sbjct: 917  DEHGLDFEQYGILIKVKFRQTGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVD 976

Query: 182  EINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPNLEYSDACSILTVMNGPWIEQ 361
            EINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLP+LEYSDACSIL +MNGPWIE+
Sbjct: 977  EINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSDACSILNIMNGPWIEK 1036

Query: 362  PSKVWSGGESWASI 403
            P+K WS G+ W ++
Sbjct: 1037 PAKAWSTGDCWRTV 1050


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