BLASTX nr result

ID: Scutellaria23_contig00013636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00013636
         (819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268778.1| PREDICTED: mediator of RNA polymerase II tra...   207   2e-51
ref|XP_002312218.1| predicted protein [Populus trichocarpa] gi|2...   201   2e-49
ref|XP_004145443.1| PREDICTED: mediator of RNA polymerase II tra...   196   5e-48
ref|XP_003595880.1| Mediator of RNA polymerase II transcription ...   194   3e-47
ref|XP_002519896.1| Surfeit locus protein, putative [Ricinus com...   192   7e-47

>ref|XP_002268778.1| PREDICTED: mediator of RNA polymerase II transcription subunit 22
           [Vitis vinifera] gi|297736089|emb|CBI24127.3| unnamed
           protein product [Vitis vinifera]
          Length = 150

 Score =  207 bits (528), Expect = 2e-51
 Identities = 104/130 (80%), Positives = 117/130 (90%)
 Frame = +2

Query: 236 QKQKNLLQRVDTDIGNLVDNFGFLVNVARVNDPPVRNSQESFMMEMRAARMVQAADSLLK 415
           QKQK LLQRV+TDI N+VD+F FLVNVARVNDPPVRNSQE+FMMEMRAARMVQAADSLLK
Sbjct: 21  QKQKTLLQRVETDIANVVDHFTFLVNVARVNDPPVRNSQEAFMMEMRAARMVQAADSLLK 80

Query: 416 LVSELKQTAVFSGFASLNDHVDQRTKEFNKLTENTNSILSRVGEETAASLKELETHYYSS 595
           LVSELKQTA+FSGFASLNDHVDQR  EFN+  E T+ +L+R+GEE AASLKELE+HYYSS
Sbjct: 81  LVSELKQTAIFSGFASLNDHVDQREAEFNQQAEKTDHLLARIGEEAAASLKELESHYYSS 140

Query: 596 ALRTNNPHEP 625
           A RT+ P +P
Sbjct: 141 AQRTSEPPQP 150


>ref|XP_002312218.1| predicted protein [Populus trichocarpa] gi|222852038|gb|EEE89585.1|
           predicted protein [Populus trichocarpa]
          Length = 158

 Score =  201 bits (510), Expect = 2e-49
 Identities = 102/130 (78%), Positives = 115/130 (88%)
 Frame = +2

Query: 236 QKQKNLLQRVDTDIGNLVDNFGFLVNVARVNDPPVRNSQESFMMEMRAARMVQAADSLLK 415
           QKQK L+QRV+TDI ++VDNF  LVNVAR+ND PVRNSQE+FMMEMRAARMVQAADSLLK
Sbjct: 29  QKQKALMQRVETDIAHIVDNFTHLVNVARINDTPVRNSQEAFMMEMRAARMVQAADSLLK 88

Query: 416 LVSELKQTAVFSGFASLNDHVDQRTKEFNKLTENTNSILSRVGEETAASLKELETHYYSS 595
           LVSELKQTA+FSGFASLNDHVDQR  EF +L E T+S+L+R+GEE AASLKELETHYYSS
Sbjct: 89  LVSELKQTAIFSGFASLNDHVDQRIGEFTQLAEKTDSMLARIGEEAAASLKELETHYYSS 148

Query: 596 ALRTNNPHEP 625
           A RT+   EP
Sbjct: 149 AQRTSQTLEP 158


>ref|XP_004145443.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           22b-like [Cucumis sativus]
           gi|449527521|ref|XP_004170759.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 22b-like
           [Cucumis sativus]
          Length = 150

 Score =  196 bits (498), Expect = 5e-48
 Identities = 99/125 (79%), Positives = 112/125 (89%)
 Frame = +2

Query: 236 QKQKNLLQRVDTDIGNLVDNFGFLVNVARVNDPPVRNSQESFMMEMRAARMVQAADSLLK 415
           QKQK LLQRV+TDI N+VDNF  LVNV+RVNDPPVRNSQESFMMEMRAARMVQAADSLLK
Sbjct: 21  QKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLK 80

Query: 416 LVSELKQTAVFSGFASLNDHVDQRTKEFNKLTENTNSILSRVGEETAASLKELETHYYSS 595
           LVSELKQTA+FSGFASLNDHV+QR  EFN+  + T+ +LSR+GEE AA+LKELE+HYYSS
Sbjct: 81  LVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTDRLLSRIGEEAAANLKELESHYYSS 140

Query: 596 ALRTN 610
             RT+
Sbjct: 141 TQRTD 145


>ref|XP_003595880.1| Mediator of RNA polymerase II transcription subunit [Medicago
           truncatula] gi|355484928|gb|AES66131.1| Mediator of RNA
           polymerase II transcription subunit [Medicago
           truncatula]
          Length = 150

 Score =  194 bits (492), Expect = 3e-47
 Identities = 100/130 (76%), Positives = 111/130 (85%)
 Frame = +2

Query: 236 QKQKNLLQRVDTDIGNLVDNFGFLVNVARVNDPPVRNSQESFMMEMRAARMVQAADSLLK 415
           QKQK LLQRV+ DI N+VDNF  LVNVARVNDPPVRNSQE+FMMEMRAARMVQAADSLLK
Sbjct: 21  QKQKTLLQRVEGDIANIVDNFSHLVNVARVNDPPVRNSQEAFMMEMRAARMVQAADSLLK 80

Query: 416 LVSELKQTAVFSGFASLNDHVDQRTKEFNKLTENTNSILSRVGEETAASLKELETHYYSS 595
           LVSELKQTA+FSGFASLNDHV+QR  EFN+L E T+  LS +GEE AASLKELE+HY SS
Sbjct: 81  LVSELKQTAIFSGFASLNDHVEQRRLEFNQLAEKTDHTLSTIGEEAAASLKELESHYSSS 140

Query: 596 ALRTNNPHEP 625
           A +T    +P
Sbjct: 141 AQKTIQDVQP 150


>ref|XP_002519896.1| Surfeit locus protein, putative [Ricinus communis]
           gi|223540942|gb|EEF42500.1| Surfeit locus protein,
           putative [Ricinus communis]
          Length = 150

 Score =  192 bits (488), Expect = 7e-47
 Identities = 100/131 (76%), Positives = 115/131 (87%), Gaps = 1/131 (0%)
 Frame = +2

Query: 236 QKQKNLLQRVDTDIGNLVDNFGFLVNVARVNDPPVRNSQESFMMEMRAARM-VQAADSLL 412
           QKQK+L+QRV+TDI N+VDNF  LVNVARVN+ PVRNSQE+FMMEMRAARM VQAADSLL
Sbjct: 20  QKQKSLMQRVETDIANIVDNFTHLVNVARVNELPVRNSQEAFMMEMRAARMQVQAADSLL 79

Query: 413 KLVSELKQTAVFSGFASLNDHVDQRTKEFNKLTENTNSILSRVGEETAASLKELETHYYS 592
           KLVSELKQTA+FSGFASLNDHVDQR  EFN+  E T+ IL++VGEE AASLK+LE+HYYS
Sbjct: 80  KLVSELKQTAIFSGFASLNDHVDQRIVEFNQQEEETDGILAKVGEEAAASLKDLESHYYS 139

Query: 593 SALRTNNPHEP 625
           SA RT+   +P
Sbjct: 140 SAHRTSQTFQP 150


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