BLASTX nr result

ID: Scutellaria23_contig00013552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00013552
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330586.1| amino acid permease [Populus trichocarpa] gi...    57   2e-06
ref|XP_002533727.1| amino acid transporter, putative [Ricinus co...    55   5e-06

>ref|XP_002330586.1| amino acid permease [Populus trichocarpa]
           gi|222872144|gb|EEF09275.1| amino acid permease [Populus
           trichocarpa]
          Length = 159

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/39 (64%), Positives = 30/39 (76%)
 Frame = +3

Query: 3   ISSNLLCDCYRYPHPEVGHIRNRSYAEAVSSYLGKSCEV 119
           +S+ LLCDCYR+P PE G IRNRSY EAV  YLG+  +V
Sbjct: 76  VSTYLLCDCYRFPDPEHGPIRNRSYMEAVKFYLGEKSQV 114


>ref|XP_002533727.1| amino acid transporter, putative [Ricinus communis]
           gi|223526365|gb|EEF28658.1| amino acid transporter,
           putative [Ricinus communis]
          Length = 461

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
 Frame = +3

Query: 3   ISSNLLCDCYRYPHPEVGHIRNRSYAEAVSSYLGKSCE-VCELDWYIEPMIY 155
           +S+ LLCDCYR+PHPE+G  RNRSY +AV   LGK    +C +  ++E  +Y
Sbjct: 72  LSTYLLCDCYRFPHPELGPSRNRSYLQAVDVSLGKKASWICGI--FVELSLY 121


Top