BLASTX nr result

ID: Scutellaria23_contig00013550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00013550
         (970 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269315.1| PREDICTED: pentatricopeptide repeat-containi...   175   1e-41
ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containi...   174   3e-41
ref|XP_004172927.1| PREDICTED: proteinaceous RNase P 1, chloropl...   167   3e-39
ref|XP_004142562.1| PREDICTED: proteinaceous RNase P 1, chloropl...   167   3e-39
emb|CAN79167.1| hypothetical protein VITISV_031236 [Vitis vinifera]   167   5e-39

>ref|XP_002269315.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 895

 Score =  175 bits (444), Expect = 1e-41
 Identities = 102/219 (46%), Positives = 138/219 (63%), Gaps = 25/219 (11%)
 Frame = -3

Query: 584 RSSNAILFHSKCINYFRCSYSSMTLIFSAKIRP-------------------KSPIYMAR 462
           +SS  +L  ++C+++F      +  +   ++RP                   K  I+M  
Sbjct: 313 QSSVVMLTRARCLSFFFAKTPILCHVGHTRLRPLLHGCSHHHFKPTTYSPYIKDRIFM-N 371

Query: 461 KATHFSTASAEALLQNSTDLSTRA------SRKKARRESPEMVLRVKLDQCSKNGDLAEA 300
           K+ HFS  +  A  +   + S  A      +RKKARRESPE VLR KLD CSK GD+ EA
Sbjct: 372 KSAHFSNLALSATNKYIPESSAAAKTMSNKARKKARRESPEGVLRFKLDMCSKRGDVVEA 431

Query: 299 LRLYNEARANIVPLNVHHYNVLLYLCSSSGNDSEQDRGDLVRLDKGFEIFKQMGIDKVAP 120
           LRLY+EAR+  VPL+ H+YNVLLYLCS SG++ +++  +L  L +GFEIFKQMG+D + P
Sbjct: 432 LRLYDEARSLGVPLSQHNYNVLLYLCSCSGSNGDENVVNLA-LKRGFEIFKQMGVDGIEP 490

Query: 119 NEATFTNVSRLAAAKKDPALAFNLIKQMKDHGIIPKLRS 3
           NEATFT+ +RLA A +DP +AFNL+KQMK  GI PKLRS
Sbjct: 491 NEATFTSAARLACAMEDPEMAFNLVKQMKSCGIPPKLRS 529


>ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 526

 Score =  174 bits (441), Expect = 3e-41
 Identities = 93/159 (58%), Positives = 116/159 (72%), Gaps = 6/159 (3%)
 Frame = -3

Query: 461 KATHFSTASAEALLQNSTDLSTRA------SRKKARRESPEMVLRVKLDQCSKNGDLAEA 300
           K+ HFS  +  A  +   + S  A      +RKKARRESPE VLR KLD CSK GD+ EA
Sbjct: 3   KSAHFSNLALSATNKYIPESSAVAETMSNKARKKARRESPEGVLRFKLDMCSKRGDVVEA 62

Query: 299 LRLYNEARANIVPLNVHHYNVLLYLCSSSGNDSEQDRGDLVRLDKGFEIFKQMGIDKVAP 120
           LRLY+EAR+  VPL+ HHYNVLLYLCS SG++ +++  +L  L +GFEIFKQMG+D + P
Sbjct: 63  LRLYDEARSRGVPLSQHHYNVLLYLCSCSGSNGDENVVNLA-LKRGFEIFKQMGVDGIEP 121

Query: 119 NEATFTNVSRLAAAKKDPALAFNLIKQMKDHGIIPKLRS 3
           NEATFT+ +RLA A +DP +AFNL+KQMK  GI PKLRS
Sbjct: 122 NEATFTSAARLACAMEDPEMAFNLVKQMKSCGIPPKLRS 160


>ref|XP_004172927.1| PREDICTED: proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 461

 Score =  167 bits (423), Expect = 3e-39
 Identities = 100/220 (45%), Positives = 139/220 (63%), Gaps = 18/220 (8%)
 Frame = -3

Query: 608 SLLLSQFCRSSNAILFHSK-----CINYFRCS---YSSMTLIFSAKIRPKS-----PIYM 468
           S L+S F ++S   L+ +K     C N  R S   YS  +++FS  I   S      I+ 
Sbjct: 6   SSLMSSFAKTSPFFLYFTKIPVFPCQNPLRASLRTYSCRSIVFSKNILKYSCNSYFSIHT 65

Query: 467 ARKATHFSTASAEALLQNSTDLSTRAS---RKKARRESPEMVLRVKLDQCSKNGDLAEAL 297
            R   + ++A+  ++  +ST  S + S   RKKA +E+PE VL+  LD CSK G + +AL
Sbjct: 66  VRYLCNVASAATSSVNASSTSSSNKVSHKLRKKALKEAPESVLKYNLDMCSKYGQVVKAL 125

Query: 296 RLYNEARANIVPLNVHHYNVLLYLCSSSG--NDSEQDRGDLVRLDKGFEIFKQMGIDKVA 123
            LY+EAR+N + LN HHYNVLLYLCSS      S  +    V L +GFEIF+QM  DKV+
Sbjct: 126 ELYDEARSNGIQLNQHHYNVLLYLCSSPSLLETSGANNLSSVVLSRGFEIFQQMMTDKVS 185

Query: 122 PNEATFTNVSRLAAAKKDPALAFNLIKQMKDHGIIPKLRS 3
           PNEATFT+++R+AAA+ DP +AF+L+KQMKD+ I P+LRS
Sbjct: 186 PNEATFTSLARIAAARDDPEMAFSLVKQMKDYHIAPRLRS 225


>ref|XP_004142562.1| PREDICTED: proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 588

 Score =  167 bits (423), Expect = 3e-39
 Identities = 100/220 (45%), Positives = 139/220 (63%), Gaps = 18/220 (8%)
 Frame = -3

Query: 608 SLLLSQFCRSSNAILFHSK-----CINYFRCS---YSSMTLIFSAKIRPKS-----PIYM 468
           S L+S F ++S   L+ +K     C N  R S   YS  +++FS  I   S      I+ 
Sbjct: 6   SSLMSSFAKTSPFFLYFTKIPVFPCQNPLRASLRTYSCRSIVFSKNILKYSCNSYFSIHT 65

Query: 467 ARKATHFSTASAEALLQNSTDLSTRAS---RKKARRESPEMVLRVKLDQCSKNGDLAEAL 297
            R   + ++A+  ++  +ST  S + S   RKKA +E+PE VL+  LD CSK G + +AL
Sbjct: 66  VRYLCNVASAATSSVNASSTSSSNKVSHKLRKKALKEAPESVLKYNLDMCSKYGQVVKAL 125

Query: 296 RLYNEARANIVPLNVHHYNVLLYLCSSSG--NDSEQDRGDLVRLDKGFEIFKQMGIDKVA 123
            LY+EAR+N + LN HHYNVLLYLCSS      S  +    V L +GFEIF+QM  DKV+
Sbjct: 126 ELYDEARSNGIQLNQHHYNVLLYLCSSPSLLETSGANNLSSVVLSRGFEIFQQMMTDKVS 185

Query: 122 PNEATFTNVSRLAAAKKDPALAFNLIKQMKDHGIIPKLRS 3
           PNEATFT+++R+AAA+ DP +AF+L+KQMKD+ I P+LRS
Sbjct: 186 PNEATFTSLARIAAARDDPEMAFSLVKQMKDYHIAPRLRS 225


>emb|CAN79167.1| hypothetical protein VITISV_031236 [Vitis vinifera]
          Length = 696

 Score =  167 bits (422), Expect = 5e-39
 Identities = 89/159 (55%), Positives = 114/159 (71%), Gaps = 6/159 (3%)
 Frame = -3

Query: 461 KATHFSTASAEALLQNSTDLSTRA------SRKKARRESPEMVLRVKLDQCSKNGDLAEA 300
           K+ HF   +  A  +   + S  A      +RKKARRESPE VLR K D CSK+GD+ EA
Sbjct: 372 KSAHFLNVALSATNKYIPESSAAAKTMSNKTRKKARRESPEGVLRFKTDMCSKHGDVVEA 431

Query: 299 LRLYNEARANIVPLNVHHYNVLLYLCSSSGNDSEQDRGDLVRLDKGFEIFKQMGIDKVAP 120
           L LY+EAR+  VPL+ H+YNVLLYLCS SG++ +++  +L  L +GFEIFKQMG+D + P
Sbjct: 432 LHLYDEARSRGVPLSQHNYNVLLYLCSCSGSNGDENVVNLA-LKRGFEIFKQMGVDGIEP 490

Query: 119 NEATFTNVSRLAAAKKDPALAFNLIKQMKDHGIIPKLRS 3
           NEATFT+ +RLA A +DP +AFNL+KQMK  GI PKLRS
Sbjct: 491 NEATFTSATRLACAMEDPEMAFNLVKQMKSCGIPPKLRS 529


Top