BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00013517
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containi...   119   2e-25
ref|XP_002308636.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_002516618.1| pentatricopeptide repeat-containing protein,...   109   2e-22
ref|XP_003549241.1| PREDICTED: pentatricopeptide repeat-containi...   105   6e-21
ref|XP_003588687.1| Pentatricopeptide repeat-containing protein ...   101   6e-20

>ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial [Vitis vinifera]
           gi|296081989|emb|CBI20994.3| unnamed protein product
           [Vitis vinifera]
          Length = 597

 Score =  119 bits (299), Expect = 2e-25
 Identities = 63/145 (43%), Positives = 88/145 (60%), Gaps = 1/145 (0%)
 Frame = +1

Query: 109 YTIPIPPLPKQNPEQISTSPPQNPNAADPDFTRISELLLNPALQPGXXXXXXXXXXXIYP 288
           + +PIP L +      S +P  NPN +  DF+ I  LL +PAL  G           I P
Sbjct: 48  WDLPIPTLKQ------SLNPNPNPNFSQSDFSTICALLTDPALSSGAPLEDALNRTGIKP 101

Query: 289 SPNLLLGIFKQFDSTPKPLFTLFSWAQKRPDYQFSVAVFNAMVNSLGKAREFDSAWCLVL 468
              LL  IF  FD++PKPLFTLF WA K+P ++ S+ +FN+M++ L K+R FDSAW LVL
Sbjct: 102 CSGLLQAIFSHFDASPKPLFTLFRWAMKQPGFESSMTLFNSMIDVLAKSRAFDSAWLLVL 161

Query: 469 DHIK-GDPSERPNFDTFVIMIRRYS 540
           D I+ G+  E  + +TF ++IRRY+
Sbjct: 162 DRIEGGEEPELVSSNTFAVLIRRYA 186


>ref|XP_002308636.1| predicted protein [Populus trichocarpa] gi|222854612|gb|EEE92159.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score =  114 bits (285), Expect = 1e-23
 Identities = 59/141 (41%), Positives = 83/141 (58%), Gaps = 1/141 (0%)
 Frame = +1

Query: 121 IPPLPKQNPEQISTSPPQNPNAADPDFTRISELLLNPALQPGXXXXXXXXXXXIYPSPNL 300
           + P P  + +  S +   NPN    DF  +  +L +P +Q G           I P   L
Sbjct: 56  LAPSPSADQQNSSPTSNSNPNYHQNDFFTLCNILKDPKIQLGPSLRTALDRTGIEPELGL 115

Query: 301 LLGIFKQFDSTPKPLFTLFSWAQKRPDYQFSVAVFNAMVNSLGKAREFDSAWCLVLDHIK 480
           +  +F  FDS+PK L ++F WA+K+P +Q S A+FN+MVN LGKAREF SAWCL+LD I 
Sbjct: 116 IQSVFDHFDSSPKLLHSVFLWAEKKPGFQSSAALFNSMVNFLGKAREFGSAWCLLLDRIG 175

Query: 481 G-DPSERPNFDTFVIMIRRYS 540
           G +  +  + DTF I+IRRY+
Sbjct: 176 GNEGGDLVSSDTFAILIRRYT 196


>ref|XP_002516618.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544438|gb|EEF45959.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 577

 Score =  109 bits (273), Expect = 2e-22
 Identities = 59/139 (42%), Positives = 85/139 (61%)
 Frame = +1

Query: 124 PPLPKQNPEQISTSPPQNPNAADPDFTRISELLLNPALQPGXXXXXXXXXXXIYPSPNLL 303
           PPLP++ P     SP  NPN +  DF+ +  LL +P L+P            I P  +LL
Sbjct: 41  PPLPEKLP-----SPTANPNYSHSDFSTLCNLLSDPNLKP---LETALDQTGIKPETSLL 92

Query: 304 LGIFKQFDSTPKPLFTLFSWAQKRPDYQFSVAVFNAMVNSLGKAREFDSAWCLVLDHIKG 483
             +F  F+S+PK L +LF WA K+P+++ S  +FN+++N+LGK +EFDSAWCLVLD    
Sbjct: 93  NAVFDHFNSSPKLLHSLFVWADKQPEFESSTTLFNSVINALGKMKEFDSAWCLVLDR--- 149

Query: 484 DPSERPNFDTFVIMIRRYS 540
             +   + DTF I+IRRY+
Sbjct: 150 --TGLVSSDTFAILIRRYT 166


>ref|XP_003549241.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Glycine max]
          Length = 622

 Score =  105 bits (261), Expect = 6e-21
 Identities = 60/147 (40%), Positives = 78/147 (53%), Gaps = 6/147 (4%)
 Frame = +1

Query: 118 PIPPLPKQNPEQISTSPPQNPNAADPDFTRISELLLNPALQPGXXXXXXXXXXXIYPSPN 297
           P  P P  NP       P  P+      + IS L  +P+L PG           I P P 
Sbjct: 66  PPKPTPNPNPNPNLNPTPDPPSPNPNALSVISNLFADPSLSPGPALHAELDRAGIEPDPA 125

Query: 298 LLLGIFKQFDSTPKPLFTLFSWAQKRPDYQFSVAVFNAMVNSLGKAREFDSAWCLVLDHI 477
           LLL +F +F S+PK L +LF WAQ RP ++    +F+A+VN+L KAREFD+AW LVL H 
Sbjct: 126 LLLAVFDRFGSSPKLLHSLFLWAQTRPAFRPGPKLFDAVVNALAKAREFDAAWKLVLHHA 185

Query: 478 KGDPSER------PNFDTFVIMIRRYS 540
           + D  E        +  TF IMIRRY+
Sbjct: 186 EKDGEEEGEKERLVSVGTFAIMIRRYA 212


>ref|XP_003588687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355477735|gb|AES58938.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 587

 Score =  101 bits (252), Expect = 6e-20
 Identities = 53/141 (37%), Positives = 78/141 (55%), Gaps = 3/141 (2%)
 Frame = +1

Query: 127 PLPKQNPEQISTSPPQNPNAADPDFTRISELLLNPALQPGXXXXXXXXXXXIYPSPNLLL 306
           P+P  NP   S      P  +  DFT IS L  NP++ PG           I P+P LL 
Sbjct: 49  PIPTLNPNPNSKPESSQPTFSPNDFTLISTLFTNPSISPGSSLLTNLTQTGIKPTPPLLH 108

Query: 307 GIFKQFDSTPKPLFTLFSWAQKRPDYQFSVAVFNAMVNSLGKAREFDSAWCLVLDHIKGD 486
            +F  F S+PK L +L+ WA  +P ++   ++F++++N+L K +EFD AW LVLD I+ D
Sbjct: 109 AVFDHFASSPKLLHSLYLWALNQPGFKPDSSLFDSVINALAKMKEFDDAWSLVLDRIRRD 168

Query: 487 PSERP---NFDTFVIMIRRYS 540
             +     +  TF I+IRRY+
Sbjct: 169 DDDDEKLVSVGTFAIIIRRYA 189