BLASTX nr result

ID: Scutellaria23_contig00013508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00013508
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147682.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    90   2e-16
ref|XP_004161919.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    89   5e-16
ref|XP_003537459.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    88   8e-16
ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    87   1e-15
emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]    87   1e-15

>ref|XP_004147682.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 383

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 52/111 (46%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
 Frame = +3

Query: 141 ASFMSMSTYWCYRCSRFVRVWTQDSVNCPDCDGGFVEEIETPA-XXXXXXXXXXXFPAAA 317
           +S  + S+YWC+RCS FVRV  QDSV CPDC+ GFVE+IE P+            FPAAA
Sbjct: 2   SSMAAASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAAA 61

Query: 318 MYMMRN-PDSSPGTGSGSVAAXXXXXXXXXXXXXXXXXFNPVIVLRGPNDG 467
           MYM+ N  +S    GSG                     FNPVIVLRGP+DG
Sbjct: 62  MYMIGNRSNSGQNLGSG--------LRRSRRNGGDRSPFNPVIVLRGPSDG 104


>ref|XP_004161919.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 380

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 51/105 (48%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
 Frame = +3

Query: 159 STYWCYRCSRFVRVWTQDSVNCPDCDGGFVEEIETPA-XXXXXXXXXXXFPAAAMYMMRN 335
           S+YWC+RCS FVRV  QDSV CPDC+ GFVE+IE P+            FPAAAMYM+ N
Sbjct: 5   SSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAAAMYMIGN 64

Query: 336 -PDSSPGTGSGSVAAXXXXXXXXXXXXXXXXXFNPVIVLRGPNDG 467
             +S    GSG                     FNPVIVLRGP+DG
Sbjct: 65  RSNSGQNLGSG--------LRRSRRNGGDRSPFNPVIVLRGPSDG 101


>ref|XP_003537459.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 393

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 49/102 (48%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
 Frame = +3

Query: 159 STYWCYRCSRFVRVWTQDSVNCPDCDGGFVEEIETP--AXXXXXXXXXXXFPAAAMYMM- 329
           S+YWCYRCSRFVRVW   +V CPDCDGGF+EEIE P  +           FPAAAMYM+ 
Sbjct: 8   SSYWCYRCSRFVRVWPHHTVVCPDCDGGFIEEIEHPPRSVHLDPRRHRHRFPAAAMYMIG 67

Query: 330 RNPDSSPGTGSGSVAAXXXXXXXXXXXXXXXXXFNPVIVLRG 455
           + P S P   S                      FNPVIVLRG
Sbjct: 68  QRPSSDPRPASS--------LRRTRRNGGDRSPFNPVIVLRG 101


>ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 388

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 50/108 (46%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
 Frame = +3

Query: 153 SMSTYWCYRCSRFVRVWTQDSVNCPDCDGGFVEEIE-TPAXXXXXXXXXXXFPAAAMYMM 329
           S ++YWC+RC+RFVRVW QDS+ CP C+ GF+EEIE TP            FPA AMYM+
Sbjct: 5   STTSYWCHRCTRFVRVWAQDSIVCPYCESGFLEEIEATP----RSENHHRRFPATAMYML 60

Query: 330 RN--PDSSPGTGSGSVAAXXXXXXXXXXXXXXXXXFNPVIVLRGPNDG 467
            N  PDS      G                     FNPVIVLRGP DG
Sbjct: 61  GNNRPDSEQSANLG--------LRRSRRNAGDRSPFNPVIVLRGPADG 100


>emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]
          Length = 1218

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 50/108 (46%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
 Frame = +3

Query: 153 SMSTYWCYRCSRFVRVWTQDSVNCPDCDGGFVEEIE-TPAXXXXXXXXXXXFPAAAMYMM 329
           S ++YWC+RC+RFVRVW QDS+ CP C+ GF+EEIE TP            FPA AMYM+
Sbjct: 115 STTSYWCHRCTRFVRVWAQDSIVCPYCESGFLEEIEATP----RSENHHRRFPATAMYML 170

Query: 330 RN--PDSSPGTGSGSVAAXXXXXXXXXXXXXXXXXFNPVIVLRGPNDG 467
            N  PDS      G                     FNPVIVLRGP DG
Sbjct: 171 GNNRPDSEQSANLG--------LRRSRRNAGDRSPFNPVIVLRGPADG 210


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