BLASTX nr result

ID: Scutellaria23_contig00013265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00013265
         (1160 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272014.2| PREDICTED: transcription elongation regulato...   333   6e-89
ref|XP_002515795.1| Pre-mRNA-processing protein PRP40, putative ...   257   4e-66
ref|XP_003538971.1| PREDICTED: transcription elongation regulato...   254   3e-65
ref|XP_003538973.1| PREDICTED: transcription elongation regulato...   250   4e-64
ref|XP_003540642.1| PREDICTED: transcription elongation regulato...   248   2e-63

>ref|XP_002272014.2| PREDICTED: transcription elongation regulator 1-like [Vitis vinifera]
            gi|297738259|emb|CBI27460.3| unnamed protein product
            [Vitis vinifera]
          Length = 1046

 Score =  333 bits (853), Expect = 6e-89
 Identities = 182/392 (46%), Positives = 238/392 (60%), Gaps = 8/392 (2%)
 Frame = +2

Query: 8    GPEGNL-HAGNYSF-GNVQPKQMDQSKATNVRADGGQEVGATTSAPVAMHSAFQPRPTSS 181
            GP G   +A ++SF GN Q  Q DQ+  ++      QE G+ +SA     S   P P SS
Sbjct: 158  GPRGPTPNAASFSFNGNPQLVQKDQTLKSDNSGAVAQEAGSMSSASHVSQSV--PFPCSS 215

Query: 182  PSATHFTSNNFNNTATWLLAPATFQMXXXXXXXXXXXXXXXIASSVPSPSSLTIQGSSLD 361
             + +  +S     T  W+ +  +F +               IA S P  S+L +  +S+D
Sbjct: 216  STMSVSSSPKMGPTTLWMPSNPSFPVPSGMPVTPGTPGPPGIAPSTPLSSNLAVPSASMD 275

Query: 362  ---STAHRTFMPSAPGLSNPSIQHNAVAMHPSTSA-QAAPPGPWMHPQQIGGFGRPSFSP 529
               S   R   P+AP  SNP+IQ      + S  A  A+  GPW+ P Q+GG  RP F P
Sbjct: 276  FSSSVVSRAIFPAAPVSSNPAIQQQIYPSYSSLPATNASSQGPWLQPPQMGGLPRPPFVP 335

Query: 530  YAAVIPGPYPMPIRSTPPQSVSYRDIQPPGVSPAVSAIGAPTASFTAGGQSSVGSGQ-TE 706
            Y AV P P+P+P    P  SV   D QPPGV+P  +A G P ++  +G   +  SG  +E
Sbjct: 336  YPAVYPTPFPLPAHGMPLPSVPLPDSQPPGVTPVGTAGGTPISAAVSGHHLANTSGMLSE 395

Query: 707  LPP-GIDNKEHVVNSVYKDEAPNKEQLDAWTAHRTETGIVYYYNALTGESTYEKPSGFKG 883
            LPP GID+ +HV  +  KD A   EQ+DAWTAH+T+TG+VYYYNALTGESTYEKPS FKG
Sbjct: 396  LPPPGIDDNKHVNGAGTKDGAAVNEQVDAWTAHKTDTGVVYYYNALTGESTYEKPSDFKG 455

Query: 884  ESDKATVQPTPISWEKLSGTDWTLVTTNDGKKYYYNATTQVSSWQVPSELIELRKKHDAD 1063
            E+DK TVQPTP+SWEKL+GTDW LVTTNDGKKYYYN  T++SSWQ+P+EL E+RKK D+ 
Sbjct: 456  EADKVTVQPTPVSWEKLTGTDWALVTTNDGKKYYYNTKTKLSSWQIPTELTEMRKKQDSV 515

Query: 1064 SLRAQSMSVTNTNIEAEKGTDPVSLSTPAANT 1159
            +L+  +M   NTN+  EKG  P++LS PA  T
Sbjct: 516  ALKEHAMLAPNTNVSTEKGPSPIALSAPAVTT 547


>ref|XP_002515795.1| Pre-mRNA-processing protein PRP40, putative [Ricinus communis]
            gi|223545064|gb|EEF46576.1| Pre-mRNA-processing protein
            PRP40, putative [Ricinus communis]
          Length = 886

 Score =  257 bits (656), Expect = 4e-66
 Identities = 145/341 (42%), Positives = 198/341 (58%), Gaps = 5/341 (1%)
 Frame = +2

Query: 152  SAFQPRPTSSPSATHFTSNNFNNTATWLLAPATFQMXXXXXXXXXXXXXXXIASSVPSPS 331
            SA  P+ T+  SA   + ++  +T T  L+  +F +                   +  P 
Sbjct: 51   SASVPQATALSSAPIVSHSSSTSTKTTSLSSPSFLVPPGLAGTPGPAGSVSCGPMILPPV 110

Query: 332  SLTIQGSSLDSTAHRTFMPSAPGLSNPSIQHNAVAMHPSTSAQAAPP-GPWMHPQQIGGF 508
            ++     S  S+  R  MP+    SNP +Q  +   +PS  A AA   G W HP Q+GG 
Sbjct: 111  TV----DSATSSVQRPVMPTVTHASNPVVQQQSYHTYPSLPAMAASAQGLWFHPPQMGGM 166

Query: 509  GRPSFSPYA-AVIPGPYPMPIRSTPPQSVSYRDIQPPGVSPAVSAIGAPTASFTAGGQSS 685
             R  F PY  AV PG YP+P       S+S  D QP G +P V   GA   S  A G   
Sbjct: 167  PRTPFLPYPPAVFPGSYPLPAHGISRPSISSPDFQPSG-APPVGIPGANPPSSAASGHQL 225

Query: 686  VGSG--QTELPP-GIDNKEHVVNSVYKDEAPNKEQLDAWTAHRTETGIVYYYNALTGEST 856
            +G+   Q E+PP GIDN+  + +   K+ A   + LDAWTAH+T+ G+VYYYNA+TG ST
Sbjct: 226  MGTPGMQKEIPPPGIDNRSQIHDFGTKNNAATSDSLDAWTAHKTDAGVVYYYNAVTGVST 285

Query: 857  YEKPSGFKGESDKATVQPTPISWEKLSGTDWTLVTTNDGKKYYYNATTQVSSWQVPSELI 1036
            YEKP GFK E +K  +QPTP+S E L+GTDW L+TTNDGK YYYN  T++SSWQ+PSE+ 
Sbjct: 286  YEKPPGFKSEPEKVPMQPTPVSMENLAGTDWALITTNDGKNYYYNNKTKLSSWQIPSEVT 345

Query: 1037 ELRKKHDADSLRAQSMSVTNTNIEAEKGTDPVSLSTPAANT 1159
            EL+KK +A+ L+ Q MSV+++++  EKG+  +SLS PA NT
Sbjct: 346  ELKKKQEAE-LKEQEMSVSSSSVLNEKGSVQISLSAPAINT 385


>ref|XP_003538971.1| PREDICTED: transcription elongation regulator 1-like [Glycine max]
          Length = 1007

 Score =  254 bits (649), Expect = 3e-65
 Identities = 153/401 (38%), Positives = 225/401 (56%), Gaps = 15/401 (3%)
 Frame = +2

Query: 2    LVGPEG-NLHAG-NYSFGNVQP------KQMDQSKATNVRADGGQEVGATTSAPVAMHSA 157
            +V P G +LHA  ++S+   Q        Q     +TN+     Q+VG  +SA    HS 
Sbjct: 113  VVQPPGVSLHAAPSFSYNIPQSGAIFSSNQQHAQSSTNMPDSVAQDVGKLSSASSIPHSV 172

Query: 158  FQPRPTSSPSATHFTSNNFNNTATWLLAPATFQMXXXXXXXXXXXXXXXIASSVPS--PS 331
              P  TS+      +  N+    +W+    +F +                +S++ S  P+
Sbjct: 173  --PAHTSTSIMPPPSDPNYRPATSWMPTAMSFPVLPVMPTQGNPGPPGLASSAIISSNPA 230

Query: 332  SLTIQGSSLDSTAHRTFMPSAPGLSNPSIQHNAVAMHPSTSAQAAPP-GPWMHPQQIGGF 508
            + +    S  +   R  MP++   S+P+     +  +PS  A AAPP G W+ P Q+ G 
Sbjct: 231  APSTGTDSSPAALLRPNMPTSAIASDPTAPQKGLP-YPSVPAMAAPPQGLWLQPPQMSGV 289

Query: 509  GRPSFSPYAAVIPGPYPMPIRSTPPQSVSYRDIQPPGVSPAVSAIGA--PTASFTAGGQS 682
             RP +  Y A  PGP+P P R     +V   D QPPGV+P  +A G   P++S    G +
Sbjct: 290  LRPPYLQYPAPFPGPFPFPARGVALPAVPIPDSQPPGVTPVGAAGGTSTPSSSHQLRGTT 349

Query: 683  SVGSGQTELPPGIDNKEHVVNSV--YKDEAPNKEQLDAWTAHRTETGIVYYYNALTGEST 856
            ++   QTE+  G  + +  +NSV    ++A N +QLDAWTAH+TE GI+YYYNA+TGEST
Sbjct: 350  AL---QTEVISGPADDKKKLNSVDTVNEDAANNDQLDAWTAHKTEAGIIYYYNAVTGEST 406

Query: 857  YEKPSGFKGESDKATVQPTPISWEKLSGTDWTLVTTNDGKKYYYNATTQVSSWQVPSELI 1036
            Y+KP+GFKGES + + QP P+S   L GTDW LV+T+DGKKYYYN  T+ S WQ+P+E+ 
Sbjct: 407  YDKPAGFKGESHQVSAQPIPVSMMDLPGTDWRLVSTSDGKKYYYNNRTKTSCWQIPNEVA 466

Query: 1037 ELRKKHDADSLRAQSMSVTNTNIEAEKGTDPVSLSTPAANT 1159
            EL+KK D D  +   MSV+NTN+ +++G+  V+L+ PA NT
Sbjct: 467  ELKKKQDGDVTKDHLMSVSNTNVLSDRGSGMVTLNAPAINT 507


>ref|XP_003538973.1| PREDICTED: transcription elongation regulator 1-like [Glycine max]
          Length = 857

 Score =  250 bits (639), Expect = 4e-64
 Identities = 142/357 (39%), Positives = 207/357 (57%), Gaps = 7/357 (1%)
 Frame = +2

Query: 110  QEVGATTSAPVAMHSAFQPRPTSSPSATHFTSNNFNNTATWLLAPATFQMXXXXXXXXXX 289
            Q+VG  +SA    HS   P  TS+      +  N+    +W+    +F +          
Sbjct: 7    QDVGKLSSASSIPHSV--PAHTSTSIMPPPSDPNYRPATSWMPTAMSFPVLPVMPTQGNP 64

Query: 290  XXXXXIASSVPS--PSSLTIQGSSLDSTAHRTFMPSAPGLSNPSIQHNAVAMHPSTSAQA 463
                  +S++ S  P++ +    S  +   R  MP++   S+P+     +  +PS  A A
Sbjct: 65   GPPGLASSAIISSNPAAPSTGTDSSPAALLRPNMPTSAIASDPTAPQKGLP-YPSVPAMA 123

Query: 464  APP-GPWMHPQQIGGFGRPSFSPYAAVIPGPYPMPIRSTPPQSVSYRDIQPPGVSPAVSA 640
            APP G W+ P Q+ G  RP +  Y A  PGP+P P R     +V   D QPPGV+P  +A
Sbjct: 124  APPQGLWLQPPQMSGVLRPPYLQYPAPFPGPFPFPARGVALPAVPIPDSQPPGVTPVGAA 183

Query: 641  IGA--PTASFTAGGQSSVGSGQTELPPGIDNKEHVVNSV--YKDEAPNKEQLDAWTAHRT 808
             G   P++S    G +++   QTE+  G  + +  +NSV    ++A N +QLDAWTAH+T
Sbjct: 184  GGTSTPSSSHQLRGTTAL---QTEVISGPADDKKKLNSVDTVNEDAANNDQLDAWTAHKT 240

Query: 809  ETGIVYYYNALTGESTYEKPSGFKGESDKATVQPTPISWEKLSGTDWTLVTTNDGKKYYY 988
            E GI+YYYNA+TGESTY+KP+GFKGES + + QP P+S   L GTDW LV+T+DGKKYYY
Sbjct: 241  EAGIIYYYNAVTGESTYDKPAGFKGESHQVSAQPIPVSMMDLPGTDWRLVSTSDGKKYYY 300

Query: 989  NATTQVSSWQVPSELIELRKKHDADSLRAQSMSVTNTNIEAEKGTDPVSLSTPAANT 1159
            N  T+ S WQ+P+E+ EL+KK D D  +   MSV+NTN+ +++G+  V+L+ PA NT
Sbjct: 301  NNRTKTSCWQIPNEVAELKKKQDGDVTKDHLMSVSNTNVLSDRGSGMVTLNAPAINT 357


>ref|XP_003540642.1| PREDICTED: transcription elongation regulator 1-like [Glycine max]
          Length = 930

 Score =  248 bits (634), Expect = 2e-63
 Identities = 128/261 (49%), Positives = 170/261 (65%), Gaps = 3/261 (1%)
 Frame = +2

Query: 386  PSAPGLSNPSIQHNAVAMHPSTSAQAAPP-GPWMHPQQIGGFGRPSFSPYAAVIPGPYPM 562
            P  PGL++ +I  +  A  PS  A AAPP G W+ P Q+ G  RP +  Y A  PGP+P 
Sbjct: 171  PGPPGLASSAIISSNPAA-PSIPALAAPPQGLWLQPPQMSGVLRPPYLQYPAPFPGPFPF 229

Query: 563  PIRSTPPQSVSYRDIQPPGVSPAVSAIGAPTASFTAGGQSSVGSGQTELPPGIDNKEHVV 742
            P R     +V   D QPPGV+P  +A G PT S ++       + QTE+  G  + +  +
Sbjct: 230  PARGVALPAVPIPDSQPPGVTPVGAAGGTPTPSASSYQLRGTTALQTEVISGSADDKKKL 289

Query: 743  NSV--YKDEAPNKEQLDAWTAHRTETGIVYYYNALTGESTYEKPSGFKGESDKATVQPTP 916
            NSV    ++A N +QLDAWTAH+TE GI+YYYNA+TGESTY KPSGFKGES + + QPTP
Sbjct: 290  NSVDTLNEDAANNDQLDAWTAHKTEAGIIYYYNAVTGESTYHKPSGFKGESHQVSAQPTP 349

Query: 917  ISWEKLSGTDWTLVTTNDGKKYYYNATTQVSSWQVPSELIELRKKHDADSLRAQSMSVTN 1096
            +S   L GTDW LV+T+DGKKYYYN  T+ S WQ+P+E+ EL+KK D D  +   MSV N
Sbjct: 350  VSMIDLPGTDWRLVSTSDGKKYYYNNLTKTSCWQIPNEVAELKKKQDGDVTKDHLMSVPN 409

Query: 1097 TNIEAEKGTDPVSLSTPAANT 1159
            TN+ +++G+  V+L+ PA NT
Sbjct: 410  TNVLSDRGSGMVTLNAPAINT 430


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