BLASTX nr result

ID: Scutellaria23_contig00013218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00013218
         (1059 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT40482.1| hypothetical protein [Solanum demissum]                338   1e-90
gb|AFX67041.1| RNA recognition motif containing protein [Solanum...   333   3e-89
ref|XP_002276614.1| PREDICTED: protein vip1 isoform 1 [Vitis vin...   313   6e-83
ref|XP_002520109.1| nucleic acid binding protein, putative [Rici...   303   4e-80
gb|AFK43947.1| unknown [Lotus japonicus]                              287   3e-75

>gb|AAT40482.1| hypothetical protein [Solanum demissum]
          Length = 244

 Score =  338 bits (868), Expect = 1e-90
 Identities = 170/239 (71%), Positives = 202/239 (84%)
 Frame = -2

Query: 848 TAEVTSLSPNASEKDLYDFFSFCGAIEHVEIVRAGEYASTAYVTFKNPHALETAVLLSGA 669
           TAEVT LSP A+EKD+ +FF FCGAIEHVEIVRAGE+ASTAYVTF+NPHALETAVLLSGA
Sbjct: 7   TAEVTGLSPAATEKDVQEFFGFCGAIEHVEIVRAGEHASTAYVTFRNPHALETAVLLSGA 66

Query: 668 TIVDQPVCITRWGHYEDDNDFWSRSTWRIEDESNTSDSQGPWAVPSAGEAVSLAQDVVKT 489
            I+DQ VCIT WGHY+D+ D+W+ S+W+ +++ ++SDSQG + V SAGEAV+L QDVVKT
Sbjct: 67  AILDQRVCITSWGHYQDEFDYWNHSSWKPQEDCHSSDSQGHYFVSSAGEAVTLTQDVVKT 126

Query: 488 MVGKGYVLGKDALGKAKAFDESHQVSATAVAKVAELSEKMGLTDKIFAGVEAARSVDQRY 309
           M+ +GYVLGK ALGKAKAFDESH +SATAV+KVA+LSE++GLTDK  AGVE ARSVDQRY
Sbjct: 127 MLSQGYVLGKGALGKAKAFDESHGLSATAVSKVADLSERIGLTDKFCAGVEVARSVDQRY 186

Query: 308 HISNTAKSAVSGTGRTXXXXXXXXXXXSYFSKGALWLSGALSRASQAAADLGGGHGVNK 132
           HIS+T +SAVS TGRT           SYFSKGALW+SGALS+A+QAAADL G  G+NK
Sbjct: 187 HISDTTRSAVSATGRTAISAATAVVNSSYFSKGALWMSGALSKAAQAAADL-GSRGINK 244


>gb|AFX67041.1| RNA recognition motif containing protein [Solanum tuberosum]
          Length = 245

 Score =  333 bits (855), Expect = 3e-89
 Identities = 170/240 (70%), Positives = 201/240 (83%), Gaps = 1/240 (0%)
 Frame = -2

Query: 848 TAEVTSLSPNASEKDLYDFFSFCGAIEHVEIVRAGEYASTAYVTFKNPHALETAVLLSGA 669
           TAEVT LSP A+EKD+ +FF FCGAIEHVEIVRAGE+ASTAYVTF+NPHALETAVLLSGA
Sbjct: 7   TAEVTGLSPTATEKDVQEFFGFCGAIEHVEIVRAGEHASTAYVTFRNPHALETAVLLSGA 66

Query: 668 TIVDQPVCITRWGHYEDDNDFWSRSTWRIEDESNTS-DSQGPWAVPSAGEAVSLAQDVVK 492
            I+DQ VCIT WGHY+D+ D+W+ S+W+ +++  +S DSQG + V SAGEAV+L QDVVK
Sbjct: 67  AILDQRVCITSWGHYQDEFDYWNHSSWKPQEDCYSSQDSQGHYFVSSAGEAVTLTQDVVK 126

Query: 491 TMVGKGYVLGKDALGKAKAFDESHQVSATAVAKVAELSEKMGLTDKIFAGVEAARSVDQR 312
           TM+ +GYVLGK ALGKAKAFDESH +SATAV+KVA+LSE++GLTDK  AGVE ARSVDQR
Sbjct: 127 TMLSQGYVLGKGALGKAKAFDESHGLSATAVSKVADLSERIGLTDKFCAGVEVARSVDQR 186

Query: 311 YHISNTAKSAVSGTGRTXXXXXXXXXXXSYFSKGALWLSGALSRASQAAADLGGGHGVNK 132
           YHIS+T +SAVS TGRT           SYFSKGALW+SGALS+A+QAAADL G  G+NK
Sbjct: 187 YHISDTTRSAVSATGRTAISAATAVVNSSYFSKGALWMSGALSKAAQAAADL-GSRGINK 245


>ref|XP_002276614.1| PREDICTED: protein vip1 isoform 1 [Vitis vinifera]
           gi|225425750|ref|XP_002276661.1| PREDICTED: protein vip1
           isoform 2 [Vitis vinifera]
           gi|359473262|ref|XP_003631279.1| PREDICTED: protein vip1
           [Vitis vinifera]
          Length = 246

 Score =  313 bits (801), Expect = 6e-83
 Identities = 166/241 (68%), Positives = 192/241 (79%), Gaps = 2/241 (0%)
 Frame = -2

Query: 848 TAEVTSLSPNASEKDLYDFFSFCGAIEHVEIVR-AGEYASTAYVTFKNPHALETAVLLSG 672
           T EVTSLSP  +EKD+YDFF+F GAIE VE+VR A E A TAYVTFK+ +A+ETAVLLSG
Sbjct: 7   TIEVTSLSPKVTEKDVYDFFAFSGAIERVEMVRSADECACTAYVTFKDAYAVETAVLLSG 66

Query: 671 ATIVDQPVCITRWGHYEDDNDFWSRSTWRIEDE-SNTSDSQGPWAVPSAGEAVSLAQDVV 495
           ATIVDQ VCITRWGHYED+ D W+R TW++EDE S+T   +   + P AGEAV++AQ+VV
Sbjct: 67  ATIVDQRVCITRWGHYEDEFDLWNRPTWKLEDETSSTHAPETNRSYPDAGEAVTMAQEVV 126

Query: 494 KTMVGKGYVLGKDALGKAKAFDESHQVSATAVAKVAELSEKMGLTDKIFAGVEAARSVDQ 315
           KTM+ KGY+LGKDAL KAK FDESHQ SATAVA VAELS+++GLTDK  AGVEAA+SVDQ
Sbjct: 127 KTMLAKGYILGKDALSKAKTFDESHQFSATAVATVAELSQRIGLTDKFCAGVEAAKSVDQ 186

Query: 314 RYHISNTAKSAVSGTGRTXXXXXXXXXXXSYFSKGALWLSGALSRASQAAADLGGGHGVN 135
           RYHIS   KSAVS TGRT           SYFSKGALW+S ALSRA++AA DL G HGVN
Sbjct: 187 RYHISEITKSAVSATGRTAAAAATTVVNSSYFSKGALWVSDALSRAAKAAGDL-GSHGVN 245

Query: 134 K 132
           K
Sbjct: 246 K 246


>ref|XP_002520109.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223540601|gb|EEF42164.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 245

 Score =  303 bits (777), Expect = 4e-80
 Identities = 154/231 (66%), Positives = 185/231 (80%), Gaps = 1/231 (0%)
 Frame = -2

Query: 842 EVTSLSPNASEKDLYDFFSFCGAIEHVEIVRAGEYASTAYVTFKNPHALETAVLLSGATI 663
           EVT LSP+ +EKDLYDFFSF G+IEHVEIVR G+YA TAYVTFKN ++ ETAVLLSGATI
Sbjct: 9   EVTGLSPSTTEKDLYDFFSFSGSIEHVEIVRCGDYACTAYVTFKNAYSQETAVLLSGATI 68

Query: 662 VDQPVCITRWGHYEDDNDFWSRSTWRIEDE-SNTSDSQGPWAVPSAGEAVSLAQDVVKTM 486
           +++ VCITRWGHY D+ D W+  + R+EDE  +T   +    VPSAGEAV +AQ+VVK M
Sbjct: 69  LEERVCITRWGHYIDEFDLWNTPSLRVEDERESTHPPERSQYVPSAGEAVIMAQEVVKNM 128

Query: 485 VGKGYVLGKDALGKAKAFDESHQVSATAVAKVAELSEKMGLTDKIFAGVEAARSVDQRYH 306
           V KGYVLGKD L KAKAFDESHQV+ATA AKVAE +E++GL DKIFAG+EA +SVDQ+YH
Sbjct: 129 VAKGYVLGKDTLSKAKAFDESHQVTATAAAKVAEFTERIGLADKIFAGMEAMKSVDQKYH 188

Query: 305 ISNTAKSAVSGTGRTXXXXXXXXXXXSYFSKGALWLSGALSRASQAAADLG 153
           +S+  KSAVS TGRT           SYFSKGALW+SGAL+RA++AAAD+G
Sbjct: 189 VSDMTKSAVSATGRTAVAAASTVVNSSYFSKGALWVSGALNRAAKAAADIG 239


>gb|AFK43947.1| unknown [Lotus japonicus]
          Length = 245

 Score =  287 bits (734), Expect = 3e-75
 Identities = 144/232 (62%), Positives = 182/232 (78%)
 Frame = -2

Query: 848 TAEVTSLSPNASEKDLYDFFSFCGAIEHVEIVRAGEYASTAYVTFKNPHALETAVLLSGA 669
           T EVT LSPNA+EKD++DFFSF GAI+HVEI+R+G+YA TAYVTFK+ ++ ETA LLSGA
Sbjct: 8   TVEVTGLSPNATEKDVHDFFSFSGAIQHVEIIRSGDYACTAYVTFKDAYSQETACLLSGA 67

Query: 668 TIVDQPVCITRWGHYEDDNDFWSRSTWRIEDESNTSDSQGPWAVPSAGEAVSLAQDVVKT 489
           TI+DQ VCITRWG+YED  DFW+R ++  E+E  ++       V SAGEAV++AQ+VVKT
Sbjct: 68  TILDQRVCITRWGNYEDAYDFWNRPSYSHEEERTSTTPHSNQFVSSAGEAVTVAQEVVKT 127

Query: 488 MVGKGYVLGKDALGKAKAFDESHQVSATAVAKVAELSEKMGLTDKIFAGVEAARSVDQRY 309
           M+ KGYVL KDAL KAK FDESHQVSATA AKV+ELS ++GL++K+ AGV+A + VDQ Y
Sbjct: 128 MLAKGYVLSKDALTKAKDFDESHQVSATATAKVSELSRRIGLSEKVSAGVKAVKYVDQMY 187

Query: 308 HISNTAKSAVSGTGRTXXXXXXXXXXXSYFSKGALWLSGALSRASQAAADLG 153
           ++S T K+A S TGR+           SYFSKGALW+SGAL+RA+Q  +DLG
Sbjct: 188 NVSGTTKAAASATGRSVASATSTVVNNSYFSKGALWVSGALTRAAQVTSDLG 239


Top