BLASTX nr result

ID: Scutellaria23_contig00013200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00013200
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_974273.1| charged multivesicular body protein 5 [Arabidop...    79   4e-13
ref|NP_187675.2| charged multivesicular body protein 5 [Arabidop...    79   4e-13
ref|NP_001190228.1| charged multivesicular body protein 5 [Arabi...    78   6e-13
gb|AAM66939.1| unknown [Arabidopsis thaliana]                          78   6e-13
ref|NP_568143.1| charged multivesicular body protein 5 [Arabidop...    78   6e-13

>ref|NP_974273.1| charged multivesicular body protein 5 [Arabidopsis thaliana]
           gi|332641417|gb|AEE74938.1| charged multivesicular body
           protein 5 [Arabidopsis thaliana]
          Length = 170

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 36/49 (73%), Positives = 41/49 (83%)
 Frame = -3

Query: 457 YLQPDKETDLDADLNLPSAPSGHAPIPGGRVQAEDELGLPAVPRATLRG 311
           YLQPD ETD D++LNLP+AP+GH   P GR QAEDE GLPAVPRA+LRG
Sbjct: 122 YLQPDTETDYDSELNLPAAPTGHNGAPHGRAQAEDEFGLPAVPRASLRG 170


>ref|NP_187675.2| charged multivesicular body protein 5 [Arabidopsis thaliana]
           gi|8567798|gb|AAF76370.1| unknown protein [Arabidopsis
           thaliana] gi|29028830|gb|AAO64794.1| At3g10640
           [Arabidopsis thaliana] gi|110736412|dbj|BAF00173.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332641416|gb|AEE74937.1| charged multivesicular body
           protein 5 [Arabidopsis thaliana]
          Length = 235

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 36/49 (73%), Positives = 41/49 (83%)
 Frame = -3

Query: 457 YLQPDKETDLDADLNLPSAPSGHAPIPGGRVQAEDELGLPAVPRATLRG 311
           YLQPD ETD D++LNLP+AP+GH   P GR QAEDE GLPAVPRA+LRG
Sbjct: 187 YLQPDTETDYDSELNLPAAPTGHNGAPHGRAQAEDEFGLPAVPRASLRG 235


>ref|NP_001190228.1| charged multivesicular body protein 5 [Arabidopsis thaliana]
           gi|332003412|gb|AED90795.1| charged multivesicular body
           protein 5 [Arabidopsis thaliana]
          Length = 272

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 37/49 (75%), Positives = 40/49 (81%)
 Frame = -3

Query: 457 YLQPDKETDLDADLNLPSAPSGHAPIPGGRVQAEDELGLPAVPRATLRG 311
           YLQPDKE DL+ +LNLPSAP GH   P GR QAEDE GLPAVPRA+LRG
Sbjct: 224 YLQPDKEPDLNDELNLPSAPMGHTGAPPGRAQAEDEWGLPAVPRASLRG 272


>gb|AAM66939.1| unknown [Arabidopsis thaliana]
          Length = 235

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 37/49 (75%), Positives = 40/49 (81%)
 Frame = -3

Query: 457 YLQPDKETDLDADLNLPSAPSGHAPIPGGRVQAEDELGLPAVPRATLRG 311
           YLQPDKE DL+ +LNLPSAP GH   P GR QAEDE GLPAVPRA+LRG
Sbjct: 187 YLQPDKEPDLNDELNLPSAPMGHTGAPPGRAQAEDEWGLPAVPRASLRG 235


>ref|NP_568143.1| charged multivesicular body protein 5 [Arabidopsis thaliana]
           gi|13877957|gb|AAK44056.1|AF370241_1 unknown protein
           [Arabidopsis thaliana] gi|9758460|dbj|BAB08989.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|23296841|gb|AAN13183.1| unknown protein [Arabidopsis
           thaliana] gi|332003411|gb|AED90794.1| charged
           multivesicular body protein 5 [Arabidopsis thaliana]
          Length = 235

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 37/49 (75%), Positives = 40/49 (81%)
 Frame = -3

Query: 457 YLQPDKETDLDADLNLPSAPSGHAPIPGGRVQAEDELGLPAVPRATLRG 311
           YLQPDKE DL+ +LNLPSAP GH   P GR QAEDE GLPAVPRA+LRG
Sbjct: 187 YLQPDKEPDLNDELNLPSAPMGHTGAPPGRAQAEDEWGLPAVPRASLRG 235


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