BLASTX nr result

ID: Scutellaria23_contig00013078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00013078
         (1628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526553.1| PREDICTED: double-stranded RNA-binding prote...   298   2e-78
gb|ACU19095.1| unknown [Glycine max]                                  298   2e-78
ref|XP_003523789.1| PREDICTED: double-stranded RNA-binding prote...   296   1e-77
ref|XP_002302370.1| predicted protein [Populus trichocarpa] gi|2...   295   3e-77
ref|XP_002514055.1| conserved hypothetical protein [Ricinus comm...   291   3e-76

>ref|XP_003526553.1| PREDICTED: double-stranded RNA-binding protein 1-like [Glycine max]
          Length = 359

 Score =  298 bits (764), Expect = 2e-78
 Identities = 165/289 (57%), Positives = 202/289 (69%), Gaps = 8/289 (2%)
 Frame = -3

Query: 1293 SNQDLQVKDSPPSVSNCYVFKSRLQEYCQKAGLTTPVYETIKEGPSHEPSFVSTVVVNDI 1114
            +N+D Q      SVSNCYVFKSRLQEY QKAGL TPVYETIKEGPSHEPSF STV+VND+
Sbjct: 3    TNEDFQ------SVSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDV 56

Query: 1113 RYDSLPGFFNRKAAEQSAAEVALIELAKSSDLSFGISQPVHETGLCKNLLQEYAQKMNYA 934
            RYDSLPGFFNRKAAEQSAAEVAL+EL KS+ ++  I+QPVHETGLCKNLLQEYAQKMNYA
Sbjct: 57   RYDSLPGFFNRKAAEQSAAEVALVELIKSNLVNQSITQPVHETGLCKNLLQEYAQKMNYA 116

Query: 933  IPLYECRKDEKEGRMPMYSCAVEIGGIKYIGASASTKKEAEIKAARTALLAIQ-TAGPIS 757
            +P+Y+C+KDE  GR  ++SC V+IGGI YIG +A TKKEAEIKAARTALLAIQ +A   S
Sbjct: 117  MPMYQCKKDETPGRASVFSCTVDIGGILYIGGAAKTKKEAEIKAARTALLAIQSSASQAS 176

Query: 756  ADHRDNSIYTVVPLKKKASDPKISTQETKAALKPKKNRFKKQYRNKKQAMRDNSAGGMVH 577
             D   +   TV+P +K+A++      E     KPKK RFK++  +K++  RD    G +H
Sbjct: 177  QDQVGHPQLTVLPCRKRATESVAIADENSNPPKPKKARFKRK-SSKRKPSRDKM--GQIH 233

Query: 576  TE-------VNADGQGGFGLGVTDGVSSEPNMASAFEVNMYGQGGVEVN 451
            TE       +N + +    +    GV  + +     E     + GV VN
Sbjct: 234  TENLGIGANINHEVETHASVNGESGVLEKKSETFTSEAANNFENGVSVN 282


>gb|ACU19095.1| unknown [Glycine max]
          Length = 359

 Score =  298 bits (764), Expect = 2e-78
 Identities = 165/289 (57%), Positives = 202/289 (69%), Gaps = 8/289 (2%)
 Frame = -3

Query: 1293 SNQDLQVKDSPPSVSNCYVFKSRLQEYCQKAGLTTPVYETIKEGPSHEPSFVSTVVVNDI 1114
            +N+D Q      SVSNCYVFKSRLQEY QKAGL TPVYETIKEGPSHEPSF STV+VND+
Sbjct: 3    TNEDFQ------SVSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDV 56

Query: 1113 RYDSLPGFFNRKAAEQSAAEVALIELAKSSDLSFGISQPVHETGLCKNLLQEYAQKMNYA 934
            RYDSLPGFFNRKAAEQSAAEVAL+EL KS+ ++  I+QPVHETGLCKNLLQEYAQKMNYA
Sbjct: 57   RYDSLPGFFNRKAAEQSAAEVALVELIKSNLVNQSITQPVHETGLCKNLLQEYAQKMNYA 116

Query: 933  IPLYECRKDEKEGRMPMYSCAVEIGGIKYIGASASTKKEAEIKAARTALLAIQ-TAGPIS 757
            +P+Y+C+KDE  GR  ++SC V+IGGI YIG +A TKKEAEIKAARTALLAIQ +A   S
Sbjct: 117  MPMYQCKKDETPGRASVFSCTVDIGGILYIGGAAKTKKEAEIKAARTALLAIQSSASQAS 176

Query: 756  ADHRDNSIYTVVPLKKKASDPKISTQETKAALKPKKNRFKKQYRNKKQAMRDNSAGGMVH 577
             D   +   TV+P +K+A++      E     KPKK RFK++  +K++  RD    G +H
Sbjct: 177  QDQVGHPQLTVLPCRKRATESVAIADENSNPPKPKKARFKRK-SSKRKPSRDKM--GQIH 233

Query: 576  TE-------VNADGQGGFGLGVTDGVSSEPNMASAFEVNMYGQGGVEVN 451
            TE       +N + +    +    GV  + +     E     + GV VN
Sbjct: 234  TENLGIGANINHEVETHASVNGESGVLEKKSETFTSEAANNFENGVSVN 282


>ref|XP_003523789.1| PREDICTED: double-stranded RNA-binding protein 1-like [Glycine max]
          Length = 359

 Score =  296 bits (758), Expect = 1e-77
 Identities = 154/242 (63%), Positives = 189/242 (78%), Gaps = 1/242 (0%)
 Frame = -3

Query: 1293 SNQDLQVKDSPPSVSNCYVFKSRLQEYCQKAGLTTPVYETIKEGPSHEPSFVSTVVVNDI 1114
            +N+D Q      SVSNCYVFKSRLQEY QKAGL TPVYETIKEGPSHEPSF STV+VND+
Sbjct: 3    TNEDFQ------SVSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDV 56

Query: 1113 RYDSLPGFFNRKAAEQSAAEVALIELAKSSDLSFGISQPVHETGLCKNLLQEYAQKMNYA 934
            RYDSLPGFFNRKAAEQSAAEVAL+EL KS+ ++  I+QPVHETGLCKNLLQEYAQKMNYA
Sbjct: 57   RYDSLPGFFNRKAAEQSAAEVALVELVKSNAVNQSITQPVHETGLCKNLLQEYAQKMNYA 116

Query: 933  IPLYECRKDEKEGRMPMYSCAVEIGGIKYIGASASTKKEAEIKAARTALLAIQTAGPISA 754
            +P+Y+C+KDE  GR  ++SC V+IGGI YIG +A TKKEAEIKAARTALLAIQ++   ++
Sbjct: 117  MPMYQCKKDETPGRASVFSCTVDIGGILYIGGAAKTKKEAEIKAARTALLAIQSSASHAS 176

Query: 753  DHR-DNSIYTVVPLKKKASDPKISTQETKAALKPKKNRFKKQYRNKKQAMRDNSAGGMVH 577
            +++  +   TV+P +K+A+       E     KPKK RFK++  +K++  RD    G +H
Sbjct: 177  ENQVGHPQLTVLPCRKRATSSVAIADENSNPPKPKKARFKRK-SSKRKPSRDKM--GQIH 233

Query: 576  TE 571
            TE
Sbjct: 234  TE 235


>ref|XP_002302370.1| predicted protein [Populus trichocarpa] gi|222844096|gb|EEE81643.1|
            predicted protein [Populus trichocarpa]
          Length = 355

 Score =  295 bits (754), Expect = 3e-77
 Identities = 159/245 (64%), Positives = 187/245 (76%), Gaps = 2/245 (0%)
 Frame = -3

Query: 1254 VSNCYVFKSRLQEYCQKAGLTTPVYETIKEGPSHEPSFVSTVVVNDIRYDSLPGFFNRKA 1075
            VSNCYVFKSRLQEY QKAGL TPVYETIKEGPSHEPSF STV+V D+RYDSLPGFFNRKA
Sbjct: 10   VSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVKDVRYDSLPGFFNRKA 69

Query: 1074 AEQSAAEVALIELAKSSDLSFGISQPVHETGLCKNLLQEYAQKMNYAIPLYECRKDEKEG 895
            AEQSAAEVAL+ELAK+ +++   SQPV+ETGLCKNLLQEYAQKMNYAIPLYEC+KDE  G
Sbjct: 70   AEQSAAEVALVELAKAGEINESTSQPVNETGLCKNLLQEYAQKMNYAIPLYECQKDETPG 129

Query: 894  RMPMYSCAVEIGGIKYIGASASTKKEAEIKAARTALLAIQTAGPISADHRDNSIYTVVPL 715
            R  ++ C VEIGGI+YIGAS  TKKEAEIKAARTALLAIQ++G  S     +S  TV+P 
Sbjct: 130  RGLVFKCTVEIGGIRYIGASTKTKKEAEIKAARTALLAIQSSG--SDKQSGSSQLTVIPC 187

Query: 714  KKKASDPKISTQETKAALKPKKNRFKKQYRNKKQAM-RDNSAGGMVHTEVN-ADGQGGFG 541
            +K+  +     +E +   KPKK RFKK+   KK +  R N+A   +  ++N  +GQ G  
Sbjct: 188  RKRGVEASFQ-EEAENVPKPKKARFKKKMLKKKLSRDRINNAQSELTEKLNIVNGQSGSE 246

Query: 540  LGVTD 526
               TD
Sbjct: 247  ADQTD 251


>ref|XP_002514055.1| conserved hypothetical protein [Ricinus communis]
            gi|223547141|gb|EEF48638.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 361

 Score =  291 bits (746), Expect = 3e-76
 Identities = 157/240 (65%), Positives = 181/240 (75%), Gaps = 3/240 (1%)
 Frame = -3

Query: 1257 SVSNCYVFKSRLQEYCQKAGLTTPVYETIKEGPSHEPSFVSTVVVNDIRYDSLPGFFNRK 1078
            SVSNCYVFKSRLQEY QK GL TPVYETIKEGPSHEPSF STV+VNDIRYDSLPGFFNRK
Sbjct: 10   SVSNCYVFKSRLQEYAQKKGLPTPVYETIKEGPSHEPSFRSTVIVNDIRYDSLPGFFNRK 69

Query: 1077 AAEQSAAEVALIELAKSSDLSFGISQPVHETGLCKNLLQEYAQKMNYAIPLYECRKDEKE 898
            AAEQSAAEVAL+ELAK  +++  ISQPVHETGLCKNLLQEYAQKMNYAIPLY C+K+E  
Sbjct: 70   AAEQSAAEVALMELAKCDEVNDSISQPVHETGLCKNLLQEYAQKMNYAIPLYLCQKNESP 129

Query: 897  GRMPMYSCAVEIGGIKYIGASASTKKEAEIKAARTALLAIQ-TAGPISADHRDNSIYTVV 721
            GR  ++ C VEIGGI YIGASA TKKEAEIKAARTALLAIQ +A   S +   N   TV+
Sbjct: 130  GRGTLFKCTVEIGGIHYIGASAKTKKEAEIKAARTALLAIQLSASESSHNSIGNCQLTVI 189

Query: 720  PLKKKASDPKISTQETKAALKPKKNRFKKQYRNKKQAMR--DNSAGGMVHTEVNADGQGG 547
            P +K+ ++     +E     K KK RF+K+   KK +    D++ G  +  +   DGQ G
Sbjct: 190  PFRKRGAETAAVLEEAMNVPKAKKARFRKKTLKKKHSGNKVDHNQGETIGNK--KDGQAG 247


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