BLASTX nr result

ID: Scutellaria23_contig00012497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00012497
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18972.3| unnamed protein product [Vitis vinifera]               96   2e-18
ref|XP_004172509.1| PREDICTED: protein translocase subunit SECA2...    92   4e-17
ref|XP_004146575.1| PREDICTED: protein translocase subunit SECA2...    92   4e-17
ref|XP_002300961.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_003527950.1| PREDICTED: uncharacterized protein LOC100793...    89   4e-16

>emb|CBI18972.3| unnamed protein product [Vitis vinifera]
          Length = 1067

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/69 (66%), Positives = 55/69 (79%)
 Frame = +3

Query: 186 RVAPSPISSSLKEKIGGIKKTWSDFSSLNYWVVKDYQRLVNSVNALEPHIQKLSDEKLRA 365
           R  P    +SLKE +G ++K WSD +SLNYWVV+DY RLVNSVNALEP IQ+LSDE+L A
Sbjct: 60  RPGPLVAVASLKENLGRLRKNWSDLTSLNYWVVRDYYRLVNSVNALEPQIQRLSDEQLAA 119

Query: 366 KTVEFRKRL 392
           KTV+FR RL
Sbjct: 120 KTVDFRVRL 128


>ref|XP_004172509.1| PREDICTED: protein translocase subunit SECA2, chloroplastic-like,
           partial [Cucumis sativus]
          Length = 192

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 40/65 (61%), Positives = 54/65 (83%)
 Frame = +3

Query: 198 SPISSSLKEKIGGIKKTWSDFSSLNYWVVKDYQRLVNSVNALEPHIQKLSDEKLRAKTVE 377
           +P+++SLKE  G ++KTWSD +S+NYWVV+DY RLV+SVN  EP +Q L+DE+L AKT E
Sbjct: 55  TPVAASLKESFGTVRKTWSDLTSMNYWVVRDYYRLVDSVNDFEPQMQSLTDEQLTAKTSE 114

Query: 378 FRKRL 392
           FR+RL
Sbjct: 115 FRRRL 119


>ref|XP_004146575.1| PREDICTED: protein translocase subunit SECA2, chloroplastic-like
           [Cucumis sativus]
          Length = 1057

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 40/65 (61%), Positives = 54/65 (83%)
 Frame = +3

Query: 198 SPISSSLKEKIGGIKKTWSDFSSLNYWVVKDYQRLVNSVNALEPHIQKLSDEKLRAKTVE 377
           +P+++SLKE  G ++KTWSD +S+NYWVV+DY RLV+SVN  EP +Q L+DE+L AKT E
Sbjct: 55  TPVAASLKESFGTVRKTWSDLTSMNYWVVRDYYRLVDSVNDFEPQMQSLTDEQLTAKTSE 114

Query: 378 FRKRL 392
           FR+RL
Sbjct: 115 FRRRL 119


>ref|XP_002300961.1| predicted protein [Populus trichocarpa] gi|222842687|gb|EEE80234.1|
           predicted protein [Populus trichocarpa]
          Length = 1053

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 44/63 (69%), Positives = 53/63 (84%)
 Frame = +3

Query: 204 ISSSLKEKIGGIKKTWSDFSSLNYWVVKDYQRLVNSVNALEPHIQKLSDEKLRAKTVEFR 383
           I+ SLKE +G +KK  +DF+SLNYW+VKDY RLV SVNALE  IQKLSD++L AKTVEFR
Sbjct: 56  INVSLKENLGSLKKRVTDFTSLNYWIVKDYYRLVESVNALESKIQKLSDDQLSAKTVEFR 115

Query: 384 KRL 392
           +RL
Sbjct: 116 RRL 118


>ref|XP_003527950.1| PREDICTED: uncharacterized protein LOC100793437 [Glycine max]
          Length = 1815

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 41/60 (68%), Positives = 51/60 (85%)
 Frame = +3

Query: 213 SLKEKIGGIKKTWSDFSSLNYWVVKDYQRLVNSVNALEPHIQKLSDEKLRAKTVEFRKRL 392
           S+KE +G ++K+ +DF+SLNYWVV+DY RLVNSVNA EP IQ LSDE+L AKT EFR+RL
Sbjct: 817 SIKENLGRVQKSLADFTSLNYWVVRDYYRLVNSVNAFEPQIQTLSDEQLAAKTAEFRRRL 876


Top