BLASTX nr result

ID: Scutellaria23_contig00012494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00012494
         (2681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273578.1| PREDICTED: cell wall integrity protein scw1-...   409   e-111
ref|XP_002525006.1| RNA-binding protein with multiple splicing, ...   404   e-110
ref|XP_004141738.1| PREDICTED: U1 small nuclear ribonucleoprotei...   395   e-107
gb|AFK46375.1| unknown [Medicago truncatula]                          375   e-101
emb|CBI25280.3| unnamed protein product [Vitis vinifera]              373   e-100

>ref|XP_002273578.1| PREDICTED: cell wall integrity protein scw1-like [Vitis vinifera]
          Length = 328

 Score =  409 bits (1052), Expect = e-111
 Identities = 214/329 (65%), Positives = 230/329 (69%), Gaps = 3/329 (0%)
 Frame = +1

Query: 886  MAGTGMHPYHQQWQXXXXXXXXXXXXXXXXXXX--ISIDSPAGRSLSDEVRTIFISGLPE 1059
            MAG G+HPYHQQW                      I +++P  R  SDEVRTIFISGLPE
Sbjct: 1    MAGAGIHPYHQQWPPAPAPQPSAPGAPPAPAHPPPILVENP-NRPNSDEVRTIFISGLPE 59

Query: 1060 DVKERELQNLLRWLPGYEASQVNFKGEHPMGFALFATPQHALAAKDALQDMMFDAQSNSI 1239
            DVKERELQNLLRWLPGYEASQVNFKGEHPMGFALF+TPQ A+AAKDALQ+M+FDA+S S+
Sbjct: 60   DVKERELQNLLRWLPGYEASQVNFKGEHPMGFALFSTPQLAVAAKDALQEMVFDAESKSV 119

Query: 1240 LHTEMAKKNLFVKRGIVADSNAYDQSKRMRTGGDYNHTAYST-SPFHPPPAAVWGPHXXX 1416
            LHTEMAKKNLFVKRGIVADS+AYDQSKR+RTGGDY HT YS+ SPFHPPPA VWGPH   
Sbjct: 120  LHTEMAKKNLFVKRGIVADSSAYDQSKRLRTGGDYTHTGYSSPSPFHPPPAPVWGPHGYM 179

Query: 1417 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNTKDNPPCNTLFXXXXXXXXXXXX 1596
                                               QNTKDNPPCNTLF            
Sbjct: 180  APAPPPYDPYGAYPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENINEEE 239

Query: 1597 XXXXFSVQPGFKQMKVLRQERHTVCFIEFEDVNSAANVHHSLQGAVIPSSGSVGMRIQYS 1776
                FSVQPGFKQMK+LRQERHTVCFIEFED+N+A NVHHSLQGAVIPSSGSVGMRIQYS
Sbjct: 240  LRGLFSVQPGFKQMKILRQERHTVCFIEFEDMNTATNVHHSLQGAVIPSSGSVGMRIQYS 299

Query: 1777 KNPFGKRKDSMHQGAGPNVNGALPPMTYQ 1863
            KNPFGKRKDS H  A    NGA  P TYQ
Sbjct: 300  KNPFGKRKDSGHPVAVAGANGAPAPPTYQ 328


>ref|XP_002525006.1| RNA-binding protein with multiple splicing, putative [Ricinus
            communis] gi|223535714|gb|EEF37378.1| RNA-binding protein
            with multiple splicing, putative [Ricinus communis]
          Length = 337

 Score =  404 bits (1037), Expect = e-110
 Identities = 214/337 (63%), Positives = 229/337 (67%), Gaps = 11/337 (3%)
 Frame = +1

Query: 886  MAGTGMHPYH-QQWQXXXXXXXXXXXXXXXXXXXIS---------IDSPAGRSLSDEVRT 1035
            MAG G+HPYH QQW                     S         +D+       DEVRT
Sbjct: 1    MAGAGIHPYHHQQWPPAAAPPPPPAAAGGAAPPPPSAVHHPPTVLVDNSNRGPTHDEVRT 60

Query: 1036 IFISGLPEDVKERELQNLLRWLPGYEASQVNFKGEHPMGFALFATPQHALAAKDALQDMM 1215
            IFI+GLPEDVKERELQNLLRWLPGYEASQVN+KGE PMGFALF+T Q A+AAK+ALQDM+
Sbjct: 61   IFITGLPEDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTSQFAIAAKEALQDML 120

Query: 1216 FDAQSNSILHTEMAKKNLFVKRGIVADSNAYDQSKRMRTGGDYNHTAYST-SPFHPPPAA 1392
            FDA+S SILHTEMAKKNLFVKRGIVADSNAYDQSKR+RTGGDY+HTAY+T SPFHPPPA 
Sbjct: 121  FDAESKSILHTEMAKKNLFVKRGIVADSNAYDQSKRLRTGGDYSHTAYTTPSPFHPPPAP 180

Query: 1393 VWGPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNTKDNPPCNTLFXXXX 1572
            VWGPH                                      QNTKDNPPCNTLF    
Sbjct: 181  VWGPHGYMAPAPPPYDPYAGYPVPQVPMPAPAPMPAPSSYLPVQNTKDNPPCNTLFIGNL 240

Query: 1573 XXXXXXXXXXXXFSVQPGFKQMKVLRQERHTVCFIEFEDVNSAANVHHSLQGAVIPSSGS 1752
                        FSVQPGFKQMKVLRQERHTVCFIEFEDVNSA+NVH SLQGAVIPSSGS
Sbjct: 241  GENINEDELRGLFSVQPGFKQMKVLRQERHTVCFIEFEDVNSASNVHRSLQGAVIPSSGS 300

Query: 1753 VGMRIQYSKNPFGKRKDSMHQGAGPNVNGALPPMTYQ 1863
            VGMRIQYSKNPFGKRKD  H  A P+ NGA P MTYQ
Sbjct: 301  VGMRIQYSKNPFGKRKDGSHSVASPSANGAPPAMTYQ 337


>ref|XP_004141738.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
            sativus] gi|449515829|ref|XP_004164950.1| PREDICTED: U1
            small nuclear ribonucleoprotein A-like [Cucumis sativus]
          Length = 335

 Score =  395 bits (1015), Expect = e-107
 Identities = 206/336 (61%), Positives = 226/336 (67%), Gaps = 10/336 (2%)
 Frame = +1

Query: 886  MAGTGMHPYHQQWQXXXXXXXXXXXXXXXXXXX---------ISIDSPAGRSLSDEVRTI 1038
            MAGTG+HPYHQQW                             I +D+P GR  SDEVRTI
Sbjct: 1    MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNP-GRHASDEVRTI 59

Query: 1039 FISGLPEDVKERELQNLLRWLPGYEASQVNFKGEHPMGFALFATPQHALAAKDALQDMMF 1218
            FI+GLPEDVKERELQNLLRWLPGYEASQVNFKGE PMGFALF+  Q A+AAKDALQDM+F
Sbjct: 60   FITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVF 119

Query: 1219 DAQSNSILHTEMAKKNLFVKRGIVADSNAYDQSKRMRTGGDYNHTAYST-SPFHPPPAAV 1395
            DA+S S+LHTEMAKKNLFVKRGIVAD++ YDQSKR+RTGGDY HT YS+ SPFH PP  +
Sbjct: 120  DAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPI 179

Query: 1396 WGPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNTKDNPPCNTLFXXXXX 1575
            WGPH                                      QNTKDNPPCNTLF     
Sbjct: 180  WGPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLG 239

Query: 1576 XXXXXXXXXXXFSVQPGFKQMKVLRQERHTVCFIEFEDVNSAANVHHSLQGAVIPSSGSV 1755
                       FSVQPGFKQMK+LRQERHTVCFIEFEDVN+A NVHHSLQGAVIPSSGSV
Sbjct: 240  ENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSV 299

Query: 1756 GMRIQYSKNPFGKRKDSMHQGAGPNVNGALPPMTYQ 1863
            GMRIQ+SKNPFGKRKD+ +  + P VNG    M YQ
Sbjct: 300  GMRIQFSKNPFGKRKDAAYPVSAPGVNGTPQAMAYQ 335


>gb|AFK46375.1| unknown [Medicago truncatula]
          Length = 314

 Score =  375 bits (963), Expect = e-101
 Identities = 195/327 (59%), Positives = 217/327 (66%), Gaps = 1/327 (0%)
 Frame = +1

Query: 886  MAGTGMHPYHQQWQXXXXXXXXXXXXXXXXXXXISIDSPAGRSLSDEVRTIFISGLPEDV 1065
            MA  G+HPYHQQW                     +I SP+    S+EVRTIFI+GLPEDV
Sbjct: 1    MAANGIHPYHQQWPPAAAPPPPQPT---------AIPSPS----SEEVRTIFITGLPEDV 47

Query: 1066 KERELQNLLRWLPGYEASQVNFKGEHPMGFALFATPQHALAAKDALQDMMFDAQSNSILH 1245
            KERELQNL RWLPG+EASQ+NFK E PMGFALF +P  A+AAKD LQDM+FD ++ S+LH
Sbjct: 48   KERELQNLCRWLPGFEASQLNFKAEKPMGFALFNSPHQAIAAKDILQDMLFDPEAKSVLH 107

Query: 1246 TEMAKKNLFVKRGIVADSNAYDQSKRMRTGGDYNHTAYST-SPFHPPPAAVWGPHXXXXX 1422
            TEMAKKNLFVKRGI AD+ A+DQSKR+RT GDYNHT Y T SPFHPPP  VWGPH     
Sbjct: 108  TEMAKKNLFVKRGIGADAVAFDQSKRLRTAGDYNHTGYVTPSPFHPPPPPVWGPHGYMAP 167

Query: 1423 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNTKDNPPCNTLFXXXXXXXXXXXXXX 1602
                                             QNTKDNPPCNTLF              
Sbjct: 168  PPPPPYDPYAGYPVAQVPMPAPVSIAPSSYVPIQNTKDNPPCNTLFIGNLGENINEEEVR 227

Query: 1603 XXFSVQPGFKQMKVLRQERHTVCFIEFEDVNSAANVHHSLQGAVIPSSGSVGMRIQYSKN 1782
              FSVQPGFKQMK++RQERHTVCFIEFEDVNSA NVHH+LQGAVIPSSGS+GMRIQYSKN
Sbjct: 228  GLFSVQPGFKQMKIIRQERHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSIGMRIQYSKN 287

Query: 1783 PFGKRKDSMHQGAGPNVNGALPPMTYQ 1863
            PFGKR+D  +  A P  NGA   MTYQ
Sbjct: 288  PFGKREDGTYPMAVPGANGAPVAMTYQ 314


>emb|CBI25280.3| unnamed protein product [Vitis vinifera]
          Length = 299

 Score =  373 bits (958), Expect = e-100
 Identities = 194/299 (64%), Positives = 210/299 (70%), Gaps = 3/299 (1%)
 Frame = +1

Query: 886  MAGTGMHPYHQQWQXXXXXXXXXXXXXXXXXXX--ISIDSPAGRSLSDEVRTIFISGLPE 1059
            MAG G+HPYHQQW                      I +++P  R  SDEVRTIFISGLPE
Sbjct: 1    MAGAGIHPYHQQWPPAPAPQPSAPGAPPAPAHPPPILVENP-NRPNSDEVRTIFISGLPE 59

Query: 1060 DVKERELQNLLRWLPGYEASQVNFKGEHPMGFALFATPQHALAAKDALQDMMFDAQSNSI 1239
            DVKERELQNLLRWLPGYEASQVNFKGEHPMGFALF+TPQ A+AAKDALQ+M+FDA+S S+
Sbjct: 60   DVKERELQNLLRWLPGYEASQVNFKGEHPMGFALFSTPQLAVAAKDALQEMVFDAESKSV 119

Query: 1240 LHTEMAKKNLFVKRGIVADSNAYDQSKRMRTGGDYNHTAYST-SPFHPPPAAVWGPHXXX 1416
            LHTEMAKKNLFVKRGIVADS+AYDQSKR+RTGGDY HT YS+ SPFHPPPA VWGPH   
Sbjct: 120  LHTEMAKKNLFVKRGIVADSSAYDQSKRLRTGGDYTHTGYSSPSPFHPPPAPVWGPHGYM 179

Query: 1417 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNTKDNPPCNTLFXXXXXXXXXXXX 1596
                                               QNTKDNPPCNTLF            
Sbjct: 180  APAPPPYDPYGAYPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENINEEE 239

Query: 1597 XXXXFSVQPGFKQMKVLRQERHTVCFIEFEDVNSAANVHHSLQGAVIPSSGSVGMRIQY 1773
                FSVQPGFKQMK+LRQERHTVCFIEFED+N+A NVHHSLQGAVIPSSGSVGMRIQY
Sbjct: 240  LRGLFSVQPGFKQMKILRQERHTVCFIEFEDMNTATNVHHSLQGAVIPSSGSVGMRIQY 298


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