BLASTX nr result

ID: Scutellaria23_contig00012313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00012313
         (1336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30061.3| unnamed protein product [Vitis vinifera]              210   6e-52
ref|XP_002308920.1| predicted protein [Populus trichocarpa] gi|2...   208   2e-51
emb|CAN64891.1| hypothetical protein VITISV_016440 [Vitis vinifera]   200   6e-49
ref|XP_002530101.1| conserved hypothetical protein [Ricinus comm...   196   1e-47
ref|XP_003625090.1| DNA repair protein recA-like protein [Medica...   172   1e-40

>emb|CBI30061.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score =  210 bits (535), Expect = 6e-52
 Identities = 134/370 (36%), Positives = 189/370 (51%), Gaps = 48/370 (12%)
 Frame = +1

Query: 148  MDNRRR-----HKWDNSRRSQNRKPPRGNCNWQPTVPSWEKEFCRVIGSLDWETLLQMKK 312
            M  RRR     H+     RS NRKPP GN  WQPTVPSWEK+FC  +GS  W+ LL+ K+
Sbjct: 1    MGGRRRQGDYHHQESQKTRSLNRKPPLGN--WQPTVPSWEKKFCSSVGSFSWQRLLENKR 58

Query: 313  FTHLYENVMKWNDSAGEEAFSNAKKRFWSEINGFPCDIPLPDPDCYIDKIDWDSEIEPEL 492
            F +LY+NV++WNDSAGEEAF NAK RFW++ING PCDI LPDPD YID+IDW+  I+PE+
Sbjct: 59   FIYLYDNVLQWNDSAGEEAFHNAKNRFWAQINGLPCDISLPDPDIYIDEIDWNCSIDPEM 118

Query: 493  QLDVELEPIISNADTDHDPVVIFGDSLLP-NQAYSSTGWGDDDENF----KVPANSSYSN 657
             LD+E EP+  +     + V   G+SLL  NQ++S TGWGD +E+      +P+     +
Sbjct: 119  ILDLEREPVDPDDCVKSEKVSSLGNSLLLLNQSFSCTGWGDAEEDIGKAADIPSGPGLWH 178

Query: 658  HG----TPWAQNLCNSLDNGATTGWPGYSND---AWNFGDGSGP---------------- 768
            H      PW  +   +      TGW G +N+   A  +G+ + P                
Sbjct: 179  HNQNVDNPWELSCTQNKGPVEATGW-GNTNEPVKATGWGNSNEPVKATGWGDWDHQPVEA 237

Query: 769  TGYVTXXXXXXXXXXXXYSNNNM-------IYGVQHDIQHRMVDGERGQWNQ----EIAQ 915
            TG+                NN+         Y    +++ R   G  G  N     E   
Sbjct: 238  TGWGDYYGAMEVPIWKDGWNNSSGWNQYENKYNDLENLKDRRAGGVWGTGNGNSRGEEVG 297

Query: 916  NVSTNKTSRVKGNN--RNRNHTDGRHKTA--YWGQRSAVDKRQDVRDWNSFNSCGPDNHH 1083
             +S  ++SR   N    +R    G  K A   + + S +DK+   +  N+ + CGP +HH
Sbjct: 298  YMSRYRSSRFHDNEYQADRGWRSGGRKRANFLFDEGSFLDKKAASQPRNTIHHCGPVSHH 357

Query: 1084 AAITVGQTWN 1113
             +   G +W+
Sbjct: 358  GSGKAGNSWS 367


>ref|XP_002308920.1| predicted protein [Populus trichocarpa] gi|222854896|gb|EEE92443.1|
           predicted protein [Populus trichocarpa]
          Length = 267

 Score =  208 bits (530), Expect = 2e-51
 Identities = 111/238 (46%), Positives = 144/238 (60%), Gaps = 32/238 (13%)
 Frame = +1

Query: 148 MDNRRRHKWD--------NSRRSQNRKPPRGNCNWQPTVPSWEKEFCRVIGSLDWETLLQ 303
           M+NRRRH+ +         + RS++RKPP    +WQPTVPSWEK FC  +GS+ W  LL+
Sbjct: 1   MNNRRRHRGEIYQHQEVQRTTRSRSRKPPHHG-SWQPTVPSWEKRFCYSVGSIPWRKLLE 59

Query: 304 MKKFTHLYENVMKWNDSAGEEAFSNAKKRFWSEINGFPCDIPLPDPDCYIDKIDWDSEIE 483
            KK  +LYENV+KWNDSAGEEAF NAK RFW+EING PC+I LPDPD YID+IDW+S ++
Sbjct: 60  TKKLMYLYENVVKWNDSAGEEAFHNAKNRFWAEINGLPCNISLPDPDIYIDEIDWNSSVD 119

Query: 484 PELQLDVELEPIISNADTDHDPVVIFGDSLLPNQAYSSTGWGDDDENF-KVP-------- 636
           PEL LD+E EP   +  T  + VVI G SLL NQ++S  GWG  +E F KVP        
Sbjct: 120 PELLLDLEREPKDHDEITKGEEVVIIGSSLLLNQSFSCAGWGGAEEEFQKVPDSALDPGH 179

Query: 637 --ANSSYSNHGTPWAQNLCNSLDNGATTGWP------GYSNDAW-------NFGDGSG 765
              N   ++   P  +N+ +  +     GW       G+ N+ W       N  DG+G
Sbjct: 180 WDFNHKVTSDENPCRRNVTHPNEAMNDDGWDCWNDSFGWGNNEWDVNNDGKNVNDGTG 237


>emb|CAN64891.1| hypothetical protein VITISV_016440 [Vitis vinifera]
          Length = 1088

 Score =  200 bits (509), Expect = 6e-49
 Identities = 104/223 (46%), Positives = 136/223 (60%), Gaps = 16/223 (7%)
 Frame = +1

Query: 148 MDNRRR-----HKWDNSRRSQNRKPPRGNCNWQPTVPSWEKEFCRVIGSLDWETLLQMKK 312
           M  RRR     H+     RS NRKPP GN  WQPTVPSWEK+FC  +GS  W+ LL+ K+
Sbjct: 1   MGGRRRQGDYHHQESQKTRSLNRKPPLGN--WQPTVPSWEKKFCSSVGSFSWQRLLENKR 58

Query: 313 FTHLYENVMKWNDSAGEEAFSNAKKRFWSEINGFPCDIPLPDPDCYIDKIDWDSEIEPEL 492
           F +LY+NV++WNDSAGEEAF NAK RFW++ING PCDI LPDPD YID+IDW+  I+PE+
Sbjct: 59  FIYLYDNVLQWNDSAGEEAFHNAKNRFWAQINGLPCDISLPDPDIYIDEIDWNCSIDPEM 118

Query: 493 QLDVELEPIISNADTDHDPVVIFGDS-LLPNQAYSSTGWGDDDENF----KVPANSSYSN 657
            LD+E EP+  +     + V   G+S LL NQ++S TGWGD +E+      +P+     +
Sbjct: 119 ILDLEREPVDPDDCVKSEKVSSLGNSLLLLNQSFSCTGWGDAEEDIGKXADIPSGPGLWH 178

Query: 658 HG----TPWAQNLCNSLDNGATTGWPGYSN--DAWNFGDGSGP 768
           H      PW  +   +      TGW       +A  +GD   P
Sbjct: 179 HNQNVDNPWELSCTQNKGAVKATGWGDSEEPVEATGWGDCGEP 221


>ref|XP_002530101.1| conserved hypothetical protein [Ricinus communis]
           gi|223530412|gb|EEF32300.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 291

 Score =  196 bits (497), Expect = 1e-47
 Identities = 97/167 (58%), Positives = 115/167 (68%), Gaps = 6/167 (3%)
 Frame = +1

Query: 148 MDNRRRHKWD------NSRRSQNRKPPRGNCNWQPTVPSWEKEFCRVIGSLDWETLLQMK 309
           M NRRRHK +         RSQ+RKPP    NWQPTVPSWEK FC  +G + W  LL+ K
Sbjct: 1   MSNRRRHKGEIHNQEVQGTRSQHRKPPFHG-NWQPTVPSWEKRFCYAVGLVPWRKLLETK 59

Query: 310 KFTHLYENVMKWNDSAGEEAFSNAKKRFWSEINGFPCDIPLPDPDCYIDKIDWDSEIEPE 489
           K  +LYENV++WNDSAGEEAF NAK RFW+EING  CDI LPDPD YID+IDW S I+ E
Sbjct: 60  KSMYLYENVVQWNDSAGEEAFHNAKNRFWAEINGLHCDISLPDPDIYIDEIDWSSNIDSE 119

Query: 490 LQLDVELEPIISNADTDHDPVVIFGDSLLPNQAYSSTGWGDDDENFK 630
           L LD+E EP         + VVIFG SLL NQ++S TGWG+ +E  +
Sbjct: 120 LYLDLEREPKYPAEKDKGEEVVIFGSSLL-NQSFSCTGWGEAEEELQ 165


>ref|XP_003625090.1| DNA repair protein recA-like protein [Medicago truncatula]
           gi|355500105|gb|AES81308.1| DNA repair protein recA-like
           protein [Medicago truncatula]
          Length = 343

 Score =  172 bits (437), Expect = 1e-40
 Identities = 88/195 (45%), Positives = 118/195 (60%), Gaps = 4/195 (2%)
 Frame = +1

Query: 169 KWDNSRRSQNRKPPRGNCNWQPTVPSWEKEFCRVIGSLDWETLLQMKKFTHLYENVMKWN 348
           +W +S  S N KPP  N    PTVPSWEK+FC  +GS+ W  +++  K+  L+  V+ WN
Sbjct: 15  QWISS--SYNGKPPLANRF--PTVPSWEKKFCNSVGSVPWRKVIEGNKYMCLHPKVVNWN 70

Query: 349 DSAGEEAFSNAKKRFWSEINGFPCDIPLPDPDCYIDKIDWDSEIEPELQLDVELE-PIIS 525
           DSA +EAF NAK RFW+EING PC+IPLPDP+ YID +DW++ I+ EL L+VE E     
Sbjct: 71  DSAVKEAFDNAKNRFWAEINGLPCNIPLPDPNIYIDDVDWNASIDSELYLEVEREAEARR 130

Query: 526 NADTDHDPVVIFGDSLLPNQAYSSTGWGDDDENFKVPANSSYSNHG---TPWAQNLCNSL 696
           N D   + +VI G SLL NQ+ S  GWGD +EN   P+  +Y+  G     W Q      
Sbjct: 131 NMDQKPEEIVILGSSLLLNQSLSGPGWGDKEENVTKPSEPNYAAQGWETNSWEQYHAPVD 190

Query: 697 DNGATTGWPGYSNDA 741
           ++    GW    ND+
Sbjct: 191 EHAKEYGWKNSQNDS 205


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