BLASTX nr result

ID: Scutellaria23_contig00012286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00012286
         (1355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, pu...   351   2e-94
ref|XP_002276502.1| PREDICTED: splicing factor U2af small subuni...   351   3e-94
ref|XP_004145565.1| PREDICTED: splicing factor U2af small subuni...   350   4e-94
dbj|BAJ34257.1| unnamed protein product [Thellungiella halophila]     350   6e-94
ref|XP_002300614.1| predicted protein [Populus trichocarpa] gi|2...   348   2e-93

>ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus communis]
            gi|223551442|gb|EEF52928.1| U2 snrnp auxiliary factor,
            small subunit, putative [Ricinus communis]
          Length = 272

 Score =  351 bits (901), Expect = 2e-94
 Identities = 171/204 (83%), Positives = 182/204 (89%)
 Frame = -2

Query: 1180 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 1001
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 1000 GVDAQGQPIDPQKIQXXXXXXXXXXXXXLTKFGEIESLSVCDNLADHMIGNVYAQFKEED 821
            GVDAQGQPIDP+KIQ             L KFGEIESL+VCDNLADHMIGNVY QF+EED
Sbjct: 61   GVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120

Query: 820  QAAAALNALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKTIGREL 641
            QAAAAL ALQGRFYSGRPIIADFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK IGR+L
Sbjct: 121  QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180

Query: 640  KRKLYGRHHGRFWGTRSNSRSVSP 569
            +RKL+GR+ G +  +RS SRSVSP
Sbjct: 181  RRKLFGRYRG-YRASRSRSRSVSP 203


>ref|XP_002276502.1| PREDICTED: splicing factor U2af small subunit B isoform 1 [Vitis
            vinifera] gi|359491881|ref|XP_003634337.1| PREDICTED:
            splicing factor U2af small subunit B isoform 2 [Vitis
            vinifera]
          Length = 272

 Score =  351 bits (900), Expect = 3e-94
 Identities = 171/206 (83%), Positives = 183/206 (88%)
 Frame = -2

Query: 1180 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 1001
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 1000 GVDAQGQPIDPQKIQXXXXXXXXXXXXXLTKFGEIESLSVCDNLADHMIGNVYAQFKEED 821
            GVDAQGQPIDP+KIQ             L KFGEIESL+VCDNLADHMIGNVY QFKEE+
Sbjct: 61   GVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFKEEE 120

Query: 820  QAAAALNALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKTIGREL 641
            QAAAAL ALQGRFYSGRPIIADFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK IGR+L
Sbjct: 121  QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180

Query: 640  KRKLYGRHHGRFWGTRSNSRSVSPPY 563
            +RKL+GR+ G +  +RS SRS+SP Y
Sbjct: 181  RRKLFGRYSG-YGRSRSRSRSLSPRY 205


>ref|XP_004145565.1| PREDICTED: splicing factor U2af small subunit B-like [Cucumis
            sativus] gi|449485076|ref|XP_004157064.1| PREDICTED:
            splicing factor U2af small subunit B-like [Cucumis
            sativus]
          Length = 276

 Score =  350 bits (899), Expect = 4e-94
 Identities = 170/204 (83%), Positives = 182/204 (89%)
 Frame = -2

Query: 1180 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 1001
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 1000 GVDAQGQPIDPQKIQXXXXXXXXXXXXXLTKFGEIESLSVCDNLADHMIGNVYAQFKEED 821
            GVDAQGQPIDP+KIQ             L KFGEIESL+VCDNLADHMIGNVY QF+EED
Sbjct: 61   GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120

Query: 820  QAAAALNALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKTIGREL 641
            QAAAAL ALQGRFYSGRPIIADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK IG++L
Sbjct: 121  QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180

Query: 640  KRKLYGRHHGRFWGTRSNSRSVSP 569
            +RKL+GR+ G +  +RS SRS+SP
Sbjct: 181  RRKLFGRYRG-YRASRSRSRSLSP 203


>dbj|BAJ34257.1| unnamed protein product [Thellungiella halophila]
          Length = 308

 Score =  350 bits (897), Expect = 6e-94
 Identities = 169/205 (82%), Positives = 181/205 (88%), Gaps = 1/205 (0%)
 Frame = -2

Query: 1180 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 1001
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 1000 GVDAQGQPIDPQKIQXXXXXXXXXXXXXLTKFGEIESLSVCDNLADHMIGNVYAQFKEED 821
            GVDAQGQP+DP+KIQ             L KFGEIESL++CDNLADHMIGNVY QFKEED
Sbjct: 61   GVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEED 120

Query: 820  QAAAALNALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKTIGREL 641
            QAAAAL ALQGRFYSGRPIIADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK + REL
Sbjct: 121  QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSREL 180

Query: 640  KRKLYGRHHGRF-WGTRSNSRSVSP 569
            +RKL+GR+   +  G+RS SRS+SP
Sbjct: 181  RRKLFGRYRRSYRRGSRSRSRSISP 205


>ref|XP_002300614.1| predicted protein [Populus trichocarpa] gi|222842340|gb|EEE79887.1|
            predicted protein [Populus trichocarpa]
          Length = 273

 Score =  348 bits (893), Expect = 2e-93
 Identities = 170/204 (83%), Positives = 180/204 (88%)
 Frame = -2

Query: 1180 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 1001
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 1000 GVDAQGQPIDPQKIQXXXXXXXXXXXXXLTKFGEIESLSVCDNLADHMIGNVYAQFKEED 821
            GVDAQGQP+DP KIQ             L KFGEIESL+VCDNLADHMIGNVY  FKEED
Sbjct: 61   GVDAQGQPLDPHKIQEHFEEFYEDIFEELNKFGEIESLNVCDNLADHMIGNVYVLFKEED 120

Query: 820  QAAAALNALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKTIGREL 641
            QAAAAL ALQGRFYSGRPIIADFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK IGR+L
Sbjct: 121  QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180

Query: 640  KRKLYGRHHGRFWGTRSNSRSVSP 569
            +RKL+GR+ G +  +RS SRSVSP
Sbjct: 181  RRKLFGRYRG-YRVSRSRSRSVSP 203


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