BLASTX nr result

ID: Scutellaria23_contig00012106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00012106
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535349.1| PREDICTED: DNA excision repair protein ERCC-...   102   3e-20
ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-...   100   1e-19
ref|XP_004167258.1| PREDICTED: DNA excision repair protein ERCC-...    88   9e-16
ref|XP_004138378.1| PREDICTED: DNA excision repair protein ERCC-...    87   2e-15
ref|XP_003591075.1| DNA excision repair protein ERCC-1 [Medicago...    86   3e-15

>ref|XP_003535349.1| PREDICTED: DNA excision repair protein ERCC-1-like [Glycine max]
          Length = 398

 Score =  102 bits (255), Expect = 3e-20
 Identities = 52/110 (47%), Positives = 72/110 (65%), Gaps = 8/110 (7%)
 Frame = +2

Query: 2   GIGERKVKRLYDTFHEPFKRTVPSQAPIPENPMDKNAVFASESSRNDGDV--------KE 157
           GIGERKVKRL+DTFHEPFKR   S+  IPE  +         S RN  +         ++
Sbjct: 283 GIGERKVKRLFDTFHEPFKRVESSRQAIPETSVQNKPASPESSIRNKAESSSLIEDKQED 342

Query: 158 THDSNKRQKKEEEISVKSALEAAFAKYSGAIGRKRNTVVLDETEENTVDE 307
           T D +KR+KKE E++VKSAL AAFAKYSG +G++++T  ++E EE+ + +
Sbjct: 343 TEDVSKRRKKEPEVTVKSALSAAFAKYSGRVGKRKSTSQVEEKEESIISK 392


>ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-1-like [Vitis vinifera]
           gi|296088298|emb|CBI36743.3| unnamed protein product
           [Vitis vinifera]
          Length = 398

 Score =  100 bits (249), Expect = 1e-19
 Identities = 51/88 (57%), Positives = 66/88 (75%)
 Frame = +2

Query: 2   GIGERKVKRLYDTFHEPFKRTVPSQAPIPENPMDKNAVFASESSRNDGDVKETHDSNKRQ 181
           GIGERKVKRLYDTFHEPFKR VPS   +PENP+  NA  +S +   + +  +  D++KR+
Sbjct: 283 GIGERKVKRLYDTFHEPFKRVVPSCPAVPENPVHNNAEPSSVNEVVEVE-NDVEDASKRR 341

Query: 182 KKEEEISVKSALEAAFAKYSGAIGRKRN 265
           KKE E++VKSAL AAFA+YS  IG++ N
Sbjct: 342 KKEPELTVKSALSAAFAQYSEKIGKRNN 369


>ref|XP_004167258.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cucumis
           sativus]
          Length = 412

 Score = 87.8 bits (216), Expect = 9e-16
 Identities = 45/98 (45%), Positives = 61/98 (62%)
 Frame = +2

Query: 2   GIGERKVKRLYDTFHEPFKRTVPSQAPIPENPMDKNAVFASESSRNDGDVKETHDSNKRQ 181
           GIGERKV+RLYDTFHEPFKR V +   +PE P   +    S +   D D K   +   + 
Sbjct: 287 GIGERKVRRLYDTFHEPFKRVVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQH 346

Query: 182 KKEEEISVKSALEAAFAKYSGAIGRKRNTVVLDETEEN 295
           KKE +++VKSAL AAFAKY+  I  K  ++  ++ +EN
Sbjct: 347 KKEPKLNVKSALSAAFAKYADKIA-KSGSIPQEKKKEN 383


>ref|XP_004138378.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cucumis
           sativus]
          Length = 391

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 45/105 (42%), Positives = 63/105 (60%)
 Frame = +2

Query: 2   GIGERKVKRLYDTFHEPFKRTVPSQAPIPENPMDKNAVFASESSRNDGDVKETHDSNKRQ 181
           GIGERKV+RLYDTFHEPFKR V +   +PE P   +    S +   D D K   +   + 
Sbjct: 288 GIGERKVRRLYDTFHEPFKRVVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQH 347

Query: 182 KKEEEISVKSALEAAFAKYSGAIGRKRNTVVLDETEENTVDENHT 316
           KKE +++VKSAL AAFAKY+  I +  +  +  E E+   + ++T
Sbjct: 348 KKEPKLNVKSALSAAFAKYADKIAKSGS--IPQEKEKGEPESSNT 390


>ref|XP_003591075.1| DNA excision repair protein ERCC-1 [Medicago truncatula]
           gi|355480123|gb|AES61326.1| DNA excision repair protein
           ERCC-1 [Medicago truncatula]
          Length = 401

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 50/108 (46%), Positives = 67/108 (62%), Gaps = 8/108 (7%)
 Frame = +2

Query: 2   GIGERKVKRLYDTFHEPFKRTVPSQAPIPENPM-------DKNAVFASESSRNDGDV-KE 157
           GIGERKVKRL+DTFHEPFKR   S+  IPE  +       D + +  +ESS +  D+ K+
Sbjct: 286 GIGERKVKRLFDTFHEPFKRVESSRQAIPETSVQNQPTSQDTSVINNTESSSSLEDIHKD 345

Query: 158 THDSNKRQKKEEEISVKSALEAAFAKYSGAIGRKRNTVVLDETEENTV 301
              ++KR+KKE E +V+SAL  AFAK S   G++  +  L E EE  V
Sbjct: 346 ADSASKRKKKEPEFTVRSALSVAFAKLSERAGKRNISSKLKEKEETVV 393


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