BLASTX nr result

ID: Scutellaria23_contig00012024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00012024
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA96677.1| retrotransposon protein, putative, Ty3-gypsy subc...    60   1e-07
gb|AAL58173.1|AC093181_19 putative polyprotein [Oryza sativa Jap...    60   2e-07
gb|AAP53331.2| retrotransposon protein, putative, Ty3-gypsy subc...    60   2e-07
gb|ABF94046.1| retrotransposon protein, putative, Ty3-gypsy subc...    60   2e-07
emb|CAE05586.1| OSJNBa0032N05.14 [Oryza sativa Japonica Group]         60   2e-07

>gb|ABA96677.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1412

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/71 (42%), Positives = 43/71 (60%)
 Frame = +2

Query: 5   TSLYGFAGESVTVYGKIQLPMVLGDGEWRQNKTMTFLIVDAPSQYNVILGRPSLSSYAAV 184
           TSL GF GE+V V G++QL +  G  E R+ + + F IVD P  YN I GR +L+ + A+
Sbjct: 304 TSLRGFGGEAVQVLGQVQLAVAFGTDENRREEQILFDIVDIPYNYNAIFGRATLNKFEAI 363

Query: 185 ISPAHLMIKFP 217
               +L +K P
Sbjct: 364 SHHNYLKLKMP 374


>gb|AAL58173.1|AC093181_19 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1931

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/71 (40%), Positives = 43/71 (60%)
 Frame = +2

Query: 5    TSLYGFAGESVTVYGKIQLPMVLGDGEWRQNKTMTFLIVDAPSQYNVILGRPSLSSYAAV 184
            TSL+GF GE+V V G+  L +  G GE R+ + + F +VD P  YN I GR +L+ + A+
Sbjct: 835  TSLHGFGGEAVQVLGQALLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKFEAI 894

Query: 185  ISPAHLMIKFP 217
                +L +K P
Sbjct: 895  CHHNYLKLKMP 905


>gb|AAP53331.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 2035

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/71 (40%), Positives = 43/71 (60%)
 Frame = +2

Query: 5    TSLYGFAGESVTVYGKIQLPMVLGDGEWRQNKTMTFLIVDAPSQYNVILGRPSLSSYAAV 184
            TSL+GF GE+V V G+  L +  G GE R+ + + F +VD P  YN I GR +L+ + A+
Sbjct: 912  TSLHGFGGEAVQVLGQALLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKFEAI 971

Query: 185  ISPAHLMIKFP 217
                +L +K P
Sbjct: 972  CHHNYLKLKMP 982


>gb|ABF94046.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 504

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/69 (40%), Positives = 43/69 (62%)
 Frame = +2

Query: 11  LYGFAGESVTVYGKIQLPMVLGDGEWRQNKTMTFLIVDAPSQYNVILGRPSLSSYAAVIS 190
           L GF G+ V   GKI L +V G GE ++ + + F +VD P QYN ILGR +++ + A+I 
Sbjct: 153 LQGFGGQQVHAIGKISLQVVFGGGENKRREEVVFDVVDMPYQYNAILGRSTINIFEAIIH 212

Query: 191 PAHLMIKFP 217
             ++ +K P
Sbjct: 213 HNYICMKLP 221


>emb|CAE05586.1| OSJNBa0032N05.14 [Oryza sativa Japonica Group]
          Length = 598

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/71 (39%), Positives = 43/71 (60%)
 Frame = +2

Query: 5   TSLYGFAGESVTVYGKIQLPMVLGDGEWRQNKTMTFLIVDAPSQYNVILGRPSLSSYAAV 184
           TSL GF GE+V V G++QL +  G  + R+ + + F +VD P  YN I GR +L+ + A+
Sbjct: 132 TSLQGFGGEAVQVLGQVQLAVAFGTSDNRREEQILFDVVDIPYNYNTIFGRATLNKFKAI 191

Query: 185 ISPAHLMIKFP 217
               +L +K P
Sbjct: 192 SHHNYLKLKMP 202


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