BLASTX nr result
ID: Scutellaria23_contig00012024
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Scutellaria23_contig00012024 (266 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABA96677.1| retrotransposon protein, putative, Ty3-gypsy subc... 60 1e-07 gb|AAL58173.1|AC093181_19 putative polyprotein [Oryza sativa Jap... 60 2e-07 gb|AAP53331.2| retrotransposon protein, putative, Ty3-gypsy subc... 60 2e-07 gb|ABF94046.1| retrotransposon protein, putative, Ty3-gypsy subc... 60 2e-07 emb|CAE05586.1| OSJNBa0032N05.14 [Oryza sativa Japonica Group] 60 2e-07 >gb|ABA96677.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 1412 Score = 60.5 bits (145), Expect = 1e-07 Identities = 30/71 (42%), Positives = 43/71 (60%) Frame = +2 Query: 5 TSLYGFAGESVTVYGKIQLPMVLGDGEWRQNKTMTFLIVDAPSQYNVILGRPSLSSYAAV 184 TSL GF GE+V V G++QL + G E R+ + + F IVD P YN I GR +L+ + A+ Sbjct: 304 TSLRGFGGEAVQVLGQVQLAVAFGTDENRREEQILFDIVDIPYNYNAIFGRATLNKFEAI 363 Query: 185 ISPAHLMIKFP 217 +L +K P Sbjct: 364 SHHNYLKLKMP 374 >gb|AAL58173.1|AC093181_19 putative polyprotein [Oryza sativa Japonica Group] Length = 1931 Score = 60.1 bits (144), Expect = 2e-07 Identities = 29/71 (40%), Positives = 43/71 (60%) Frame = +2 Query: 5 TSLYGFAGESVTVYGKIQLPMVLGDGEWRQNKTMTFLIVDAPSQYNVILGRPSLSSYAAV 184 TSL+GF GE+V V G+ L + G GE R+ + + F +VD P YN I GR +L+ + A+ Sbjct: 835 TSLHGFGGEAVQVLGQALLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKFEAI 894 Query: 185 ISPAHLMIKFP 217 +L +K P Sbjct: 895 CHHNYLKLKMP 905 >gb|AAP53331.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 2035 Score = 60.1 bits (144), Expect = 2e-07 Identities = 29/71 (40%), Positives = 43/71 (60%) Frame = +2 Query: 5 TSLYGFAGESVTVYGKIQLPMVLGDGEWRQNKTMTFLIVDAPSQYNVILGRPSLSSYAAV 184 TSL+GF GE+V V G+ L + G GE R+ + + F +VD P YN I GR +L+ + A+ Sbjct: 912 TSLHGFGGEAVQVLGQALLLIAFGSGENRREEQILFDVVDIPYNYNAIFGRATLNKFEAI 971 Query: 185 ISPAHLMIKFP 217 +L +K P Sbjct: 972 CHHNYLKLKMP 982 >gb|ABF94046.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 504 Score = 60.1 bits (144), Expect = 2e-07 Identities = 28/69 (40%), Positives = 43/69 (62%) Frame = +2 Query: 11 LYGFAGESVTVYGKIQLPMVLGDGEWRQNKTMTFLIVDAPSQYNVILGRPSLSSYAAVIS 190 L GF G+ V GKI L +V G GE ++ + + F +VD P QYN ILGR +++ + A+I Sbjct: 153 LQGFGGQQVHAIGKISLQVVFGGGENKRREEVVFDVVDMPYQYNAILGRSTINIFEAIIH 212 Query: 191 PAHLMIKFP 217 ++ +K P Sbjct: 213 HNYICMKLP 221 >emb|CAE05586.1| OSJNBa0032N05.14 [Oryza sativa Japonica Group] Length = 598 Score = 59.7 bits (143), Expect = 2e-07 Identities = 28/71 (39%), Positives = 43/71 (60%) Frame = +2 Query: 5 TSLYGFAGESVTVYGKIQLPMVLGDGEWRQNKTMTFLIVDAPSQYNVILGRPSLSSYAAV 184 TSL GF GE+V V G++QL + G + R+ + + F +VD P YN I GR +L+ + A+ Sbjct: 132 TSLQGFGGEAVQVLGQVQLAVAFGTSDNRREEQILFDVVDIPYNYNTIFGRATLNKFKAI 191 Query: 185 ISPAHLMIKFP 217 +L +K P Sbjct: 192 SHHNYLKLKMP 202