BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00011844
         (1133 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282635.1| PREDICTED: putative exosome complex componen...   343   5e-92
ref|XP_002318044.1| predicted protein [Populus trichocarpa] gi|1...   341   2e-91
ref|XP_003613959.1| Exosome complex exonuclease RRP40 [Medicago ...   340   4e-91
ref|XP_003518749.1| PREDICTED: putative exosome complex componen...   332   1e-88
ref|XP_004138110.1| PREDICTED: putative exosome complex componen...   326   8e-87

>ref|XP_002282635.1| PREDICTED: putative exosome complex component rrp40 [Vitis vinifera]
            gi|297733775|emb|CBI15022.3| unnamed protein product
            [Vitis vinifera]
          Length = 237

 Score =  343 bits (880), Expect = 5e-92
 Identities = 174/230 (75%), Positives = 195/230 (84%), Gaps = 1/230 (0%)
 Frame = -2

Query: 1015 SLIDQYVFPGDIVLDLSTMANQTIKLGSGLYQDGDVISVMIAGMLRFSKPNKFWVESSHK 836
            S +DQ V PGD+VLDLS M NQTIKLG GL+QD D I+V  AG LRFSKPNK+WVESS K
Sbjct: 8    SFVDQLVVPGDVVLDLSKMGNQTIKLGGGLHQDCDAITVTKAGRLRFSKPNKYWVESSQK 67

Query: 835  RYIPNVGDNVLGIVVDTRADNFLVDIKCSALAFLPVLAFEGGTRRNIPKFEMGTLLYVRV 656
            RY+P V D VLGIVVD++ADNFLVDIK  ALAFLPVLAFEGGTRRNIPKFE GTLLYVRV
Sbjct: 68   RYVPCVEDTVLGIVVDSKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRV 127

Query: 655  VKATPGMNPDLSCMDANGKAADYGPLKDGLMFDTTTGLSRMLLSSP-CPVLETLGKKLAF 479
            VKA  GMNP+LSC DA+GKAA++GPLKDG MF+++TGLSRMLLSSP CPVLE LGKKL+F
Sbjct: 128  VKANTGMNPELSCTDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPTCPVLEALGKKLSF 187

Query: 478  EIAVGINGRFWVNASSPSLVVLVGNTIMQMEPLSPAQQKIRVESLLQKLQ 329
            EIAVG+NGR WVNASSPS V+LV N IM  E LS  QQKI V+ LLQ++Q
Sbjct: 188  EIAVGLNGRVWVNASSPSTVILVANAIMNSESLSVVQQKIMVDKLLQRIQ 237


>ref|XP_002318044.1| predicted protein [Populus trichocarpa] gi|118482713|gb|ABK93275.1|
            unknown [Populus trichocarpa] gi|222858717|gb|EEE96264.1|
            predicted protein [Populus trichocarpa]
          Length = 242

 Score =  341 bits (875), Expect = 2e-91
 Identities = 175/240 (72%), Positives = 199/240 (82%), Gaps = 6/240 (2%)
 Frame = -2

Query: 1030 MESKKS-----LIDQYVFPGDIVLDLSTMANQTIKLGSGLYQDGDVISVMIAGMLRFSKP 866
            MESK S      ID  V PGD+V+DLS+M NQTIKLGSGL QD D ISVM AG LRFSKP
Sbjct: 1    MESKSSGSPATFIDNLVVPGDVVVDLSSMTNQTIKLGSGLRQDCDAISVMKAGKLRFSKP 60

Query: 865  NKFWVESSHKRYIPNVGDNVLGIVVDTRADNFLVDIKCSALAFLPVLAFEGGTRRNIPKF 686
            NK+WVE+S KRY+P   D+VLGIVVD+++DNFL+DIK  ALAFLPVLAFEGGTRRNIPKF
Sbjct: 61   NKYWVETSQKRYVPCAEDSVLGIVVDSKSDNFLIDIKGPALAFLPVLAFEGGTRRNIPKF 120

Query: 685  EMGTLLYVRVVKATPGMNPDLSCMDANGKAADYGPLKDGLMFDTTTGLSRMLLSSP-CPV 509
            E GTLLYVRVVKA PGMNP+LSC DA+GKAA++G LKDG MF+ +TGLSRMLLSSP CPV
Sbjct: 121  EAGTLLYVRVVKANPGMNPELSCTDASGKAAEFGALKDGYMFECSTGLSRMLLSSPTCPV 180

Query: 508  LETLGKKLAFEIAVGINGRFWVNASSPSLVVLVGNTIMQMEPLSPAQQKIRVESLLQKLQ 329
            LE LGKKL+FEIAVG+NGR WVNA+SPS+V++V N IM  E LS  QQKI  E LLQK+Q
Sbjct: 181  LEALGKKLSFEIAVGLNGRVWVNANSPSIVIIVANAIMNSETLSGVQQKIMAEKLLQKIQ 240


>ref|XP_003613959.1| Exosome complex exonuclease RRP40 [Medicago truncatula]
            gi|217074508|gb|ACJ85614.1| unknown [Medicago truncatula]
            gi|355515294|gb|AES96917.1| Exosome complex exonuclease
            RRP40 [Medicago truncatula] gi|388510130|gb|AFK43131.1|
            unknown [Medicago truncatula]
          Length = 240

 Score =  340 bits (872), Expect = 4e-91
 Identities = 167/233 (71%), Positives = 197/233 (84%), Gaps = 1/233 (0%)
 Frame = -2

Query: 1024 SKKSLIDQYVFPGDIVLDLSTMANQTIKLGSGLYQDGDVISVMIAGMLRFSKPNKFWVES 845
            S  + +DQ V+PGD+VLDLSTM NQTIKLG GL QDGDVISVM AG LRFSKPNK+WVES
Sbjct: 8    SSTNFVDQLVYPGDVVLDLSTMTNQTIKLGGGLRQDGDVISVMKAGRLRFSKPNKYWVES 67

Query: 844  SHKRYIPNVGDNVLGIVVDTRADNFLVDIKCSALAFLPVLAFEGGTRRNIPKFEMGTLLY 665
            S KRY+P+  D+VLGI+VD+R+DNFLVDIK   LAFLPVLAFEGGTRRNIPKFE+G L+Y
Sbjct: 68   SQKRYVPHAEDSVLGIIVDSRSDNFLVDIKGPTLAFLPVLAFEGGTRRNIPKFEVGALIY 127

Query: 664  VRVVKATPGMNPDLSCMDANGKAADYGPLKDGLMFDTTTGLSRMLLSSP-CPVLETLGKK 488
            VRVVKA PGMNP+LSC DA+GKA ++G LK+G MF+ +TGLSRMLLS+P CPVL+TLGKK
Sbjct: 128  VRVVKAIPGMNPELSCTDASGKAGEFGALKEGYMFECSTGLSRMLLSTPTCPVLDTLGKK 187

Query: 487  LAFEIAVGINGRFWVNASSPSLVVLVGNTIMQMEPLSPAQQKIRVESLLQKLQ 329
            L+FEIAVG+NGR WVNASSPS  ++V N ++  E LS  QQKI  E LLQ++Q
Sbjct: 188  LSFEIAVGLNGRVWVNASSPSTTIIVANALINSEVLSGVQQKIMAEKLLQRVQ 240


>ref|XP_003518749.1| PREDICTED: putative exosome complex component rrp40-like [Glycine
            max]
          Length = 240

 Score =  332 bits (851), Expect = 1e-88
 Identities = 164/232 (70%), Positives = 195/232 (84%), Gaps = 1/232 (0%)
 Frame = -2

Query: 1024 SKKSLIDQYVFPGDIVLDLSTMANQTIKLGSGLYQDGDVISVMIAGMLRFSKPNKFWVES 845
            S  +L+DQ V PGD++LDLS M NQTIKLG GL QD D ISVM AG LRFSKPNK+WVE+
Sbjct: 8    SSTNLVDQSVCPGDVILDLSNMTNQTIKLGGGLRQDCDAISVMKAGRLRFSKPNKYWVEN 67

Query: 844  SHKRYIPNVGDNVLGIVVDTRADNFLVDIKCSALAFLPVLAFEGGTRRNIPKFEMGTLLY 665
            S KRY+P+  D+VLGIVVD+R+DNFLVDIK  ALAFLPVLAFEGGTRRNIP+FE+GTL+Y
Sbjct: 68   SQKRYVPHAEDSVLGIVVDSRSDNFLVDIKGPALAFLPVLAFEGGTRRNIPRFEIGTLIY 127

Query: 664  VRVVKATPGMNPDLSCMDANGKAADYGPLKDGLMFDTTTGLSRMLLSSP-CPVLETLGKK 488
             RVVKA PGMNP+L+C DA+GKAA++G LKDG MF+ TTGLSRMLLSSP CPVL+ LGKK
Sbjct: 128  ARVVKANPGMNPELACTDASGKAAEFGALKDGYMFECTTGLSRMLLSSPTCPVLDALGKK 187

Query: 487  LAFEIAVGINGRFWVNASSPSLVVLVGNTIMQMEPLSPAQQKIRVESLLQKL 332
            L+FEIAVG+NGR WV+A+SP   ++V N IM  E LS AQQ+I VE LL+++
Sbjct: 188  LSFEIAVGLNGRVWVSAASPQTTIVVANAIMNSETLSGAQQRIMVEKLLERI 239


>ref|XP_004138110.1| PREDICTED: putative exosome complex component rrp40-like [Cucumis
            sativus] gi|449477413|ref|XP_004155016.1| PREDICTED:
            putative exosome complex component rrp40-like [Cucumis
            sativus]
          Length = 243

 Score =  326 bits (835), Expect = 8e-87
 Identities = 165/235 (70%), Positives = 191/235 (81%), Gaps = 1/235 (0%)
 Frame = -2

Query: 1024 SKKSLIDQYVFPGDIVLDLSTMANQTIKLGSGLYQDGDVISVMIAGMLRFSKPNKFWVES 845
            S  +L+DQ V PGD+VLDLS MAN+TIKLG GL QD D ISV   G LRFSKPNK+WVES
Sbjct: 8    SSSTLVDQPVVPGDVVLDLSNMANETIKLGGGLRQDQDAISVSKVGKLRFSKPNKYWVES 67

Query: 844  SHKRYIPNVGDNVLGIVVDTRADNFLVDIKCSALAFLPVLAFEGGTRRNIPKFEMGTLLY 665
            S KRY+P   D VLGIV+D+RADNFLVDIK  +LAFLPVLAFEGGTRRNIPKFEMG LLY
Sbjct: 68   SQKRYVPCAEDCVLGIVLDSRADNFLVDIKGPSLAFLPVLAFEGGTRRNIPKFEMGALLY 127

Query: 664  VRVVKATPGMNPDLSCMDANGKAADYGPLKDGLMFDTTTGLSRMLLSSP-CPVLETLGKK 488
            VRVVK  PGMNP+L+C DA+GKAA +G LKDG MF+ +TGLSRMLLSSP CPVLE+LGKK
Sbjct: 128  VRVVKVNPGMNPELACTDASGKAAGFGLLKDGYMFECSTGLSRMLLSSPSCPVLESLGKK 187

Query: 487  LAFEIAVGINGRFWVNASSPSLVVLVGNTIMQMEPLSPAQQKIRVESLLQKLQLT 323
            L+FE AVG+NGR WVNA SPS +++V N I+  E LS  QQ+I V+ LL  L+L+
Sbjct: 188  LSFETAVGLNGRVWVNADSPSTIIVVSNAILNSETLSGVQQRIMVDKLLANLKLS 242