BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00011814
         (891 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [...   290   2e-76
ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   288   1e-75
ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   283   3e-74
ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   283   3e-74
emb|CBI18448.3| unnamed protein product [Vitis vinifera]              281   1e-73

>ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223533842|gb|EEF35573.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 468

 Score =  290 bits (743), Expect = 2e-76
 Identities = 152/244 (62%), Positives = 182/244 (74%), Gaps = 3/244 (1%)
 Frame = -1

Query: 723 KPWSKMRPPPPASA-AVIRVSNNIVHLSRPKEGPKPRQXXXXXXXXXXXXXGRKSTSALH 547
           + +S++ PPPPA A  VIRVSNN+ HL  PK+GPKPRQ             GR S ++ H
Sbjct: 15  RSYSRIAPPPPAYANPVIRVSNNVAHLGSPKDGPKPRQLLSLPPFPGLPLPGRNSMAS-H 73

Query: 546 VTAISWLKYYLDDIPPPVIQNHFNKALVQIEHPD-TGCCE-GRTLSMRKIRPSEMMEVGA 373
           VTAISW+KYY D+I    IQ+HFNK L  IE P+ +G  E G  +S+RKI+ +++ME GA
Sbjct: 74  VTAISWVKYYFDEILDSAIQSHFNKGLAHIECPNGSGSIEYGGQMSLRKIKHNDIMEAGA 133

Query: 372 RIYVPVSIAESKVSKRFDVIPSGTLNPNADEIDYLRRLVKYKDSAILVLNKPPKLPVKGV 193
           R++V VS+AE+++SKRFD IPSGTL PNADEI YL+RLVKYKDSAI+VLNKPP+LPVKG 
Sbjct: 134 RVHVAVSVAETRISKRFDTIPSGTLYPNADEIQYLQRLVKYKDSAIIVLNKPPRLPVKGN 193

Query: 192 VSVHNSMDXXXXXXLSYDYDEGPKLVHRFDRESSGLLLMGRTKESISHLQWLFGDEKKKK 13
           + +HNSMD      LSYDYDEGPKLV R DRESSGLLLMGRTKESI HLQWLF D  K  
Sbjct: 194 LPLHNSMDALAAAALSYDYDEGPKLVQRLDRESSGLLLMGRTKESIDHLQWLFSDVNKSN 253

Query: 12  SLCK 1
           S CK
Sbjct: 254 SRCK 257


>ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis
           vinifera]
          Length = 479

 Score =  288 bits (737), Expect = 1e-75
 Identities = 153/259 (59%), Positives = 185/259 (71%), Gaps = 9/259 (3%)
 Frame = -1

Query: 750 QEAFLAVRRKPWSKMRPPPPASAA-VIRVSNNIVHLSRPKEGPKPRQXXXXXXXXXXXXX 574
           Q  F  VR   +S++ PP PASAA VIRVSNN+  L  PKEGPKPRQ             
Sbjct: 10  QGLFPVVRH--YSRIAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLPPFPAHPLP 67

Query: 573 GRKSTSA----LHVTAISWLKYYLDDIPPPVIQNHFNKALVQIEHPDTGCC----EGRTL 418
           G+   +      HVTAISW+KYY D+IP  V+Q+HFNK LV +E  +        EG+  
Sbjct: 68  GKSLVNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSSLEKEGQIK 127

Query: 417 SMRKIRPSEMMEVGARIYVPVSIAESKVSKRFDVIPSGTLNPNADEIDYLRRLVKYKDSA 238
            +RKI+P+E+ME G RIYVPVS+AE+++SKRFD IPSGTL+PNADEI+YL+RLV YKD A
Sbjct: 128 PLRKIKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQRLVTYKDPA 187

Query: 237 ILVLNKPPKLPVKGVVSVHNSMDXXXXXXLSYDYDEGPKLVHRFDRESSGLLLMGRTKES 58
           ILVLNKPPK+P+KG + VHNSMD      L++DY+EGPKLVHR DRESSGLLLMGRTKES
Sbjct: 188 ILVLNKPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSGLLLMGRTKES 247

Query: 57  ISHLQWLFGDEKKKKSLCK 1
           ++HL WLF D  K KSL K
Sbjct: 248 VAHLHWLFSDINKAKSLSK 266


>ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score =  283 bits (725), Expect = 3e-74
 Identities = 150/253 (59%), Positives = 177/253 (69%), Gaps = 7/253 (2%)
 Frame = -1

Query: 738 LAVRRKPWSKMRPPPPASAA-VIRVSNNIVHLSRPKEGPKPRQXXXXXXXXXXXXXGRK- 565
           L +  + +S++ PPPPA A  +IRVSNNI  L  PKEGPK RQ             G+  
Sbjct: 9   LLLATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPGYPLPGKNQ 68

Query: 564 ---STSALHVTAISWLKYYLDDIPPPVIQNHFNKALVQIEHPDTGCCE--GRTLSMRKIR 400
              S  + HVTAI W+KYY D+I    IQ+HF K LVQ+E P  G  +  G    MRKIR
Sbjct: 69  VGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGGLDEKGNLKPMRKIR 128

Query: 399 PSEMMEVGARIYVPVSIAESKVSKRFDVIPSGTLNPNADEIDYLRRLVKYKDSAILVLNK 220
             E+ME GARI++PVS+AE KV++RFD IPSGTL PNADEI YL+RLVKYKDSAI+VLNK
Sbjct: 129 SGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKDSAIIVLNK 188

Query: 219 PPKLPVKGVVSVHNSMDXXXXXXLSYDYDEGPKLVHRFDRESSGLLLMGRTKESISHLQW 40
           PPKLPVKG + VHNSMD      LSYDYD+GPKLVHR DRESSG+LLMGRTKES+ HLQW
Sbjct: 189 PPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTKESVDHLQW 248

Query: 39  LFGDEKKKKSLCK 1
           LF + +  K  CK
Sbjct: 249 LFSNIRNAKFTCK 261


>ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score =  283 bits (725), Expect = 3e-74
 Identities = 150/253 (59%), Positives = 177/253 (69%), Gaps = 7/253 (2%)
 Frame = -1

Query: 738 LAVRRKPWSKMRPPPPASAA-VIRVSNNIVHLSRPKEGPKPRQXXXXXXXXXXXXXGRK- 565
           L +  + +S++ PPPPA A  +IRVSNNI  L  PKEGPK RQ             G+  
Sbjct: 9   LLLATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPGYPLPGKNQ 68

Query: 564 ---STSALHVTAISWLKYYLDDIPPPVIQNHFNKALVQIEHPDTGCCE--GRTLSMRKIR 400
              S  + HVTAI W+KYY D+I    IQ+HF K LVQ+E P  G  +  G    MRKIR
Sbjct: 69  VGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGGLDEKGNLKPMRKIR 128

Query: 399 PSEMMEVGARIYVPVSIAESKVSKRFDVIPSGTLNPNADEIDYLRRLVKYKDSAILVLNK 220
             E+ME GARI++PVS+AE KV++RFD IPSGTL PNADEI YL+RLVKYKDSAI+VLNK
Sbjct: 129 SGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKDSAIIVLNK 188

Query: 219 PPKLPVKGVVSVHNSMDXXXXXXLSYDYDEGPKLVHRFDRESSGLLLMGRTKESISHLQW 40
           PPKLPVKG + VHNSMD      LSYDYD+GPKLVHR DRESSG+LLMGRTKES+ HLQW
Sbjct: 189 PPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTKESVDHLQW 248

Query: 39  LFGDEKKKKSLCK 1
           LF + +  K  CK
Sbjct: 249 LFSNIRNAKFTCK 261


>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  281 bits (719), Expect = 1e-73
 Identities = 151/261 (57%), Positives = 186/261 (71%), Gaps = 11/261 (4%)
 Frame = -1

Query: 750 QEAFLAVRRKPWSKMRPPPPASAA-VIRVSNNIVHLSRPKEGPKPRQXXXXXXXXXXXXX 574
           Q  F  VR   +S++ PP PASAA VIRVSNN+  L  PKEGPKPRQ             
Sbjct: 10  QGLFPVVRH--YSRIAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLPPFPAHPLP 67

Query: 573 GRKSTSA----LHVTAISWLKYYLDDIPPPVIQNHFNKALVQIEHPDTGCC----EGRTL 418
           G+   +      HVTAISW+KYY D+IP  V+Q+HFNK LV +E  +        EG+  
Sbjct: 68  GKSLVNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSSLEKEGQIK 127

Query: 417 SMRKIRPSEMMEVGARIYVPVSIAESKVSKRFDVIPSGTLNPNADEIDYLRRL--VKYKD 244
            +RKI+P+E+ME G RIYVPVS+AE+++SKRFD IPSGTL+PNADEI+YL+RL  +K++D
Sbjct: 128 PLRKIKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQRLWLLKFQD 187

Query: 243 SAILVLNKPPKLPVKGVVSVHNSMDXXXXXXLSYDYDEGPKLVHRFDRESSGLLLMGRTK 64
            AILVLNKPPK+P+KG + VHNSMD      L++DY+EGPKLVHR DRESSGLLLMGRTK
Sbjct: 188 PAILVLNKPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSGLLLMGRTK 247

Query: 63  ESISHLQWLFGDEKKKKSLCK 1
           ES++HL WLF D  K KSL K
Sbjct: 248 ESVAHLHWLFSDINKAKSLSK 268