BLASTX nr result

ID: Scutellaria23_contig00011513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00011513
         (909 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95843.1| unknown [Populus trichocarpa]                          217   3e-54
ref|XP_002271666.1| PREDICTED: photosystem II reaction center PS...   215   1e-53
ref|XP_003537110.1| PREDICTED: photosystem II reaction center PS...   214   2e-53
ref|NP_001235805.1| uncharacterized protein LOC100306491 [Glycin...   214   3e-53
ref|XP_002526538.1| Photosystem II reaction center W protein, pu...   212   1e-52

>gb|ABK95843.1| unknown [Populus trichocarpa]
          Length = 181

 Score =  217 bits (552), Expect = 3e-54
 Identities = 110/142 (77%), Positives = 116/142 (81%)
 Frame = +2

Query: 230 FNGQSLTLARSSSPKHSHVHCIRRLSIMMVKPTIQFIQGTDEKTTPDVRLTKSRDGTNGM 409
           FNGQSL L R   P          L  MMVKP IQF+QG DE+T PDVRLTKSRDGTNGM
Sbjct: 40  FNGQSLCLPRLRLPLIRRKLRTSGLVTMMVKPAIQFVQGADEQTVPDVRLTKSRDGTNGM 99

Query: 410 AIFTFSEPSVFDSSSVVGDITGFYMIDEEGTLQSVDVNAKFVNGKPAGIEAKYIMRSPRE 589
           AIFTF +PSVFDSS+ VGDITGFYMIDEEG LQSVDVNAKFVNGKP  IEAKYIMR+PRE
Sbjct: 100 AIFTFDQPSVFDSSAEVGDITGFYMIDEEGILQSVDVNAKFVNGKPERIEAKYIMRTPRE 159

Query: 590 WDRFMRFMERYANANGLSFVKK 655
           WDRFMRFME+YANANGL FVKK
Sbjct: 160 WDRFMRFMEKYANANGLQFVKK 181


>ref|XP_002271666.1| PREDICTED: photosystem II reaction center PSB28 protein,
           chloroplastic [Vitis vinifera]
           gi|297744226|emb|CBI37196.3| unnamed protein product
           [Vitis vinifera]
          Length = 179

 Score =  215 bits (548), Expect = 1e-53
 Identities = 107/142 (75%), Positives = 116/142 (81%)
 Frame = +2

Query: 230 FNGQSLTLARSSSPKHSHVHCIRRLSIMMVKPTIQFIQGTDEKTTPDVRLTKSRDGTNGM 409
           FNG+SL L R              L  MMVKPTIQFIQGTDE+T PDVRLT+SRDGTNGM
Sbjct: 38  FNGRSLHLPRPQWAALKRSSSTSGLITMMVKPTIQFIQGTDEQTVPDVRLTQSRDGTNGM 97

Query: 410 AIFTFSEPSVFDSSSVVGDITGFYMIDEEGTLQSVDVNAKFVNGKPAGIEAKYIMRSPRE 589
           AIF F +PSVFDSS  VGDITGFYMIDEEG LQSVDV+AKF+NGKP+GIEAKY+MRSPRE
Sbjct: 98  AIFKFEQPSVFDSSGEVGDITGFYMIDEEGVLQSVDVSAKFINGKPSGIEAKYVMRSPRE 157

Query: 590 WDRFMRFMERYANANGLSFVKK 655
           WDRFMRFMERY+N NGL FVKK
Sbjct: 158 WDRFMRFMERYSNENGLQFVKK 179


>ref|XP_003537110.1| PREDICTED: photosystem II reaction center PSB28 protein,
           chloroplastic-like [Glycine max]
          Length = 179

 Score =  214 bits (546), Expect = 2e-53
 Identities = 110/149 (73%), Positives = 120/149 (80%), Gaps = 7/149 (4%)
 Frame = +2

Query: 230 FNGQSLTLA-------RSSSPKHSHVHCIRRLSIMMVKPTIQFIQGTDEKTTPDVRLTKS 388
           FNGQ+L +        R S+P H  V       IMM KP IQFIQGTDE+T PDVRLTKS
Sbjct: 38  FNGQTLRMPCLRLPVLRQSTPMHMPV-------IMMAKPKIQFIQGTDEQTIPDVRLTKS 90

Query: 389 RDGTNGMAIFTFSEPSVFDSSSVVGDITGFYMIDEEGTLQSVDVNAKFVNGKPAGIEAKY 568
           RDGTNGMAIFTF +PSVFDSS  +GDITGFYMIDEEG LQSVDV+AKFVNGKP+ IEAKY
Sbjct: 91  RDGTNGMAIFTFDQPSVFDSSGEIGDITGFYMIDEEGVLQSVDVSAKFVNGKPSIIEAKY 150

Query: 569 IMRSPREWDRFMRFMERYANANGLSFVKK 655
           +MRSPREWDRFMRFMERY+NANGL FVKK
Sbjct: 151 VMRSPREWDRFMRFMERYSNANGLQFVKK 179


>ref|NP_001235805.1| uncharacterized protein LOC100306491 [Glycine max]
           gi|255628701|gb|ACU14695.1| unknown [Glycine max]
          Length = 179

 Score =  214 bits (544), Expect = 3e-53
 Identities = 109/149 (73%), Positives = 121/149 (81%), Gaps = 7/149 (4%)
 Frame = +2

Query: 230 FNGQSLTLA-------RSSSPKHSHVHCIRRLSIMMVKPTIQFIQGTDEKTTPDVRLTKS 388
           FNGQ+L L        R ++P H  V       IMMVKP IQFIQGTDE+T PDVRLTKS
Sbjct: 38  FNGQTLHLPCLRLPVLRQNTPMHMPV-------IMMVKPKIQFIQGTDEQTIPDVRLTKS 90

Query: 389 RDGTNGMAIFTFSEPSVFDSSSVVGDITGFYMIDEEGTLQSVDVNAKFVNGKPAGIEAKY 568
           RDGTNGMAIFTF +PSVFDSS  +GDITGFYMIDEEG LQSVDV+AKFVNGKP+ IEAKY
Sbjct: 91  RDGTNGMAIFTFDQPSVFDSSGEIGDITGFYMIDEEGVLQSVDVSAKFVNGKPSIIEAKY 150

Query: 569 IMRSPREWDRFMRFMERYANANGLSFVKK 655
           +MRSPR+WDRFMRFMERY+NANGL F+KK
Sbjct: 151 VMRSPRDWDRFMRFMERYSNANGLQFIKK 179


>ref|XP_002526538.1| Photosystem II reaction center W protein, putative [Ricinus
           communis] gi|223534099|gb|EEF35816.1| Photosystem II
           reaction center W protein, putative [Ricinus communis]
          Length = 178

 Score =  212 bits (539), Expect = 1e-52
 Identities = 110/145 (75%), Positives = 120/145 (82%), Gaps = 4/145 (2%)
 Frame = +2

Query: 230 FNGQSLTLAR----SSSPKHSHVHCIRRLSIMMVKPTIQFIQGTDEKTTPDVRLTKSRDG 397
           F+G+SL L+     S+  K S      R   MM KP+IQFIQGTDE+T PDVRLTKSRDG
Sbjct: 39  FSGKSLRLSHPQLTSTRQKSS------RFITMMAKPSIQFIQGTDEQTIPDVRLTKSRDG 92

Query: 398 TNGMAIFTFSEPSVFDSSSVVGDITGFYMIDEEGTLQSVDVNAKFVNGKPAGIEAKYIMR 577
           TNGMAIFTF EPSVFDSS+ +GDITGFYMIDEEG LQSVDV+AKFVNGKPA IEAKY+MR
Sbjct: 93  TNGMAIFTFDEPSVFDSSAELGDITGFYMIDEEGVLQSVDVSAKFVNGKPARIEAKYVMR 152

Query: 578 SPREWDRFMRFMERYANANGLSFVK 652
           SPREWDRFMRFMERYANANGL FVK
Sbjct: 153 SPREWDRFMRFMERYANANGLQFVK 177