BLASTX nr result

ID: Scutellaria23_contig00011394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00011394
         (671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237722.1| uncharacterized protein LOC100305856 [Glycin...   193   2e-47
ref|XP_002282385.1| PREDICTED: small nuclear ribonucleoprotein S...   193   3e-47
ref|XP_003630137.1| Small nuclear ribonucleoprotein Sm D3 [Medic...   192   5e-47
ref|XP_002301922.1| predicted protein [Populus trichocarpa] gi|2...   192   6e-47
ref|XP_002270532.2| PREDICTED: small nuclear ribonucleoprotein S...   192   6e-47

>ref|NP_001237722.1| uncharacterized protein LOC100305856 [Glycine max]
           gi|356525557|ref|XP_003531391.1| PREDICTED: small
           nuclear ribonucleoprotein Sm D3-like [Glycine max]
           gi|255626793|gb|ACU13741.1| unknown [Glycine max]
          Length = 131

 Score =  193 bits (491), Expect = 2e-47
 Identities = 94/99 (94%), Positives = 98/99 (98%)
 Frame = +3

Query: 96  MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKVAQL 275
           MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGK +QL
Sbjct: 1   MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQL 60

Query: 276 EHVFIRGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSAL 392
           EHVFIRGSKVRFMVIPDMLKNAPMFKRL+ARIKGKG++L
Sbjct: 61  EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASL 99


>ref|XP_002282385.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Vitis vinifera]
           gi|297744494|emb|CBI37756.3| unnamed protein product
           [Vitis vinifera]
          Length = 132

 Score =  193 bits (490), Expect = 3e-47
 Identities = 93/99 (93%), Positives = 99/99 (100%)
 Frame = +3

Query: 96  MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKVAQL 275
           MSRSLGIPVKLLHEA+GHVVTVELKSGELYRGSMIECEDNWNCQLE+IT+TAKDGKV+QL
Sbjct: 1   MSRSLGIPVKLLHEAAGHVVTVELKSGELYRGSMIECEDNWNCQLENITFTAKDGKVSQL 60

Query: 276 EHVFIRGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSAL 392
           EHVFIRGSKVRFMVIPDMLKNAPMFKRL+AR+KGKGSAL
Sbjct: 61  EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARVKGKGSAL 99


>ref|XP_003630137.1| Small nuclear ribonucleoprotein Sm D3 [Medicago truncatula]
           gi|355524159|gb|AET04613.1| Small nuclear
           ribonucleoprotein Sm D3 [Medicago truncatula]
           gi|388503694|gb|AFK39913.1| unknown [Medicago
           truncatula]
          Length = 131

 Score =  192 bits (488), Expect = 5e-47
 Identities = 93/99 (93%), Positives = 98/99 (98%)
 Frame = +3

Query: 96  MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKVAQL 275
           MSRSLGIPVKLLHEASGHVVTVELKSGELYRG+MIECEDNWNCQLESITYTAKDGK +QL
Sbjct: 1   MSRSLGIPVKLLHEASGHVVTVELKSGELYRGNMIECEDNWNCQLESITYTAKDGKTSQL 60

Query: 276 EHVFIRGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSAL 392
           EHVFIRGSKVRFMVIPDMLKNAPMFKRL+ARIKGKG++L
Sbjct: 61  EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASL 99


>ref|XP_002301922.1| predicted protein [Populus trichocarpa] gi|222843648|gb|EEE81195.1|
           predicted protein [Populus trichocarpa]
          Length = 132

 Score =  192 bits (487), Expect = 6e-47
 Identities = 92/99 (92%), Positives = 98/99 (98%)
 Frame = +3

Query: 96  MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKVAQL 275
           MSRSLGIPVKLLHEASGH+VTVELKSGELYRGSM+ECEDNWNCQLESITYTAKDGKV+QL
Sbjct: 1   MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMVECEDNWNCQLESITYTAKDGKVSQL 60

Query: 276 EHVFIRGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSAL 392
           EHVFIRGSKVRFMVIPDMLKNAPMFKRL+ARIKGK ++L
Sbjct: 61  EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKSASL 99


>ref|XP_002270532.2| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Vitis
           vinifera] gi|297745546|emb|CBI40711.3| unnamed protein
           product [Vitis vinifera]
          Length = 132

 Score =  192 bits (487), Expect = 6e-47
 Identities = 93/99 (93%), Positives = 98/99 (98%)
 Frame = +3

Query: 96  MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKVAQL 275
           MSRSLGIPVKLLHEA+GHVVTVELKSGELYRG+MIECEDNWNCQLESIT+T KDGKV+QL
Sbjct: 1   MSRSLGIPVKLLHEAAGHVVTVELKSGELYRGNMIECEDNWNCQLESITFTGKDGKVSQL 60

Query: 276 EHVFIRGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSAL 392
           EHVFIRGSKVRFMVIPDMLKNAPMFKRL+ARIKGKGSAL
Sbjct: 61  EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGSAL 99


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