BLASTX nr result

ID: Scutellaria23_contig00011320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00011320
         (755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516031.1| cytoplasmic dynein light chain, putative [Ri...   180   3e-43
ref|XP_002303289.1| predicted protein [Populus trichocarpa] gi|2...   177   2e-42
ref|NP_001154419.1| RHO guanyl-nucleotide exchange factor 11 [Ar...   170   3e-40
ref|XP_003597748.1| Dynein light chain [Medicago truncatula] gi|...   169   4e-40
ref|XP_002894369.1| dynein light chain type 1 family protein [Ar...   169   6e-40

>ref|XP_002516031.1| cytoplasmic dynein light chain, putative [Ricinus communis]
           gi|223544936|gb|EEF46451.1| cytoplasmic dynein light
           chain, putative [Ricinus communis]
          Length = 112

 Score =  180 bits (457), Expect = 3e-43
 Identities = 87/94 (92%), Positives = 89/94 (94%)
 Frame = +1

Query: 190 MLEGKALIEDTDMPLKMQIQAMAYASQALDLYDVCDCKSIAAHIKKEFDKKYGNGWQCVV 369
           MLEGKALIEDTDMP+KMQIQAMA ASQALDLYDV DCKSIAAHIKKEFD KYG GWQCVV
Sbjct: 1   MLEGKALIEDTDMPVKMQIQAMACASQALDLYDVLDCKSIAAHIKKEFDMKYGGGWQCVV 60

Query: 370 GSNFGCFFTHTKGSFIYFTLETLYFLIFKGASSP 471
           GSNFGCFFTH+KGSFIYFTLETL FLIFKGASSP
Sbjct: 61  GSNFGCFFTHSKGSFIYFTLETLNFLIFKGASSP 94


>ref|XP_002303289.1| predicted protein [Populus trichocarpa] gi|222840721|gb|EEE78268.1|
           predicted protein [Populus trichocarpa]
          Length = 94

 Score =  177 bits (449), Expect = 2e-42
 Identities = 84/94 (89%), Positives = 89/94 (94%)
 Frame = +1

Query: 190 MLEGKALIEDTDMPLKMQIQAMAYASQALDLYDVCDCKSIAAHIKKEFDKKYGNGWQCVV 369
           MLEGKALIEDTDMPLKMQIQAMA ASQALDLYDV DCKS+A+HIKKEFD +YG GWQCVV
Sbjct: 1   MLEGKALIEDTDMPLKMQIQAMASASQALDLYDVLDCKSVASHIKKEFDLRYGGGWQCVV 60

Query: 370 GSNFGCFFTHTKGSFIYFTLETLYFLIFKGASSP 471
           GSNFGCFFTH+KG+FIYFTLETL FLIFKGASSP
Sbjct: 61  GSNFGCFFTHSKGTFIYFTLETLNFLIFKGASSP 94


>ref|NP_001154419.1| RHO guanyl-nucleotide exchange factor 11 [Arabidopsis thaliana]
           gi|6850349|gb|AAF29412.1|AC022354_11 dynein light chain,
           putative [Arabidopsis thaliana]
           gi|12323118|gb|AAG51538.1|AC037424_3 unknown protein;
           73838-74229 [Arabidopsis thaliana]
           gi|38454092|gb|AAR20740.1| At1g52250 [Arabidopsis
           thaliana] gi|46402458|gb|AAS92331.1| At1g52250
           [Arabidopsis thaliana] gi|332194653|gb|AEE32774.1| RHO
           guanyl-nucleotide exchange factor 11 [Arabidopsis
           thaliana]
          Length = 94

 Score =  170 bits (431), Expect = 3e-40
 Identities = 77/94 (81%), Positives = 90/94 (95%)
 Frame = +1

Query: 190 MLEGKALIEDTDMPLKMQIQAMAYASQALDLYDVCDCKSIAAHIKKEFDKKYGNGWQCVV 369
           MLEGKA++ED+DMP+KMQ+QAMA+ASQALDL+DV DCKSIA HIKKEFD++YG+GWQCVV
Sbjct: 1   MLEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVV 60

Query: 370 GSNFGCFFTHTKGSFIYFTLETLYFLIFKGASSP 471
           GSNFGCFFTH+KG+FIYF LETL FLIFKGAS+P
Sbjct: 61  GSNFGCFFTHSKGTFIYFQLETLKFLIFKGASTP 94


>ref|XP_003597748.1| Dynein light chain [Medicago truncatula]
           gi|355486796|gb|AES67999.1| Dynein light chain [Medicago
           truncatula]
          Length = 91

 Score =  169 bits (429), Expect = 4e-40
 Identities = 79/90 (87%), Positives = 85/90 (94%)
 Frame = +1

Query: 190 MLEGKALIEDTDMPLKMQIQAMAYASQALDLYDVCDCKSIAAHIKKEFDKKYGNGWQCVV 369
           MLEGKA+IEDTDMP KMQIQAMAYAS+ALDLYDV DCKSIAAHIKKEFD +YG GWQCVV
Sbjct: 1   MLEGKAMIEDTDMPTKMQIQAMAYASEALDLYDVIDCKSIAAHIKKEFDARYGGGWQCVV 60

Query: 370 GSNFGCFFTHTKGSFIYFTLETLYFLIFKG 459
           GS+FGCFFTH+KG+FIYFTLETL FLIFKG
Sbjct: 61  GSSFGCFFTHSKGTFIYFTLETLNFLIFKG 90


>ref|XP_002894369.1| dynein light chain type 1 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297340211|gb|EFH70628.1| dynein light chain
           type 1 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 94

 Score =  169 bits (428), Expect = 6e-40
 Identities = 76/94 (80%), Positives = 90/94 (95%)
 Frame = +1

Query: 190 MLEGKALIEDTDMPLKMQIQAMAYASQALDLYDVCDCKSIAAHIKKEFDKKYGNGWQCVV 369
           MLEGKA++ED+DMP+KMQ+QAM++ASQALDL+DV DCKSIA HIKKEFD++YG+GWQCVV
Sbjct: 1   MLEGKAMVEDSDMPVKMQMQAMSFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVV 60

Query: 370 GSNFGCFFTHTKGSFIYFTLETLYFLIFKGASSP 471
           GSNFGCFFTH+KG+FIYF LETL FLIFKGAS+P
Sbjct: 61  GSNFGCFFTHSKGTFIYFQLETLKFLIFKGASTP 94


Top