BLASTX nr result

ID: Scutellaria23_contig00011290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00011290
         (887 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276763.1| PREDICTED: uncharacterized protein LOC100264...   146   7e-33
gb|AEG66932.1| plastid transcriptionally active [Gossypium hirsu...   130   5e-28
ref|XP_002308199.1| predicted protein [Populus trichocarpa] gi|2...   122   8e-26
ref|XP_004162753.1| PREDICTED: transcription antitermination pro...   122   1e-25
gb|ACJ85315.1| unknown [Medicago truncatula] gi|388503726|gb|AFK...   121   2e-25

>ref|XP_002276763.1| PREDICTED: uncharacterized protein LOC100264906 [Vitis vinifera]
           gi|297740266|emb|CBI30448.3| unnamed protein product
           [Vitis vinifera]
          Length = 339

 Score =  146 bits (368), Expect = 7e-33
 Identities = 80/146 (54%), Positives = 101/146 (69%), Gaps = 11/146 (7%)
 Frame = -2

Query: 886 KRQINKPRPVDEEDMETMFKQAKEEQEKADQAFEEEQRKNEALDSEKLGVGSPLVSQNLT 707
           KRQINKPRPV  +D+E +FKQ+KEEQEKAD+AFEEEQ+K E ++ EKL +   L S+++T
Sbjct: 193 KRQINKPRPVSVDDIEAIFKQSKEEQEKADKAFEEEQQKEETINPEKLIIYPHLDSKDVT 252

Query: 706 QTNASKNPGGRGRKSARVPS-----------LKPGSTVHVTSGSFAGFSGTLKKLDVKMG 560
            +     P  R RK+++  +           LKPGSTV V SG+F  FSG+LKKLD K G
Sbjct: 253 ISVVDSKPKRRSRKASKPIADGASTAKHDKLLKPGSTVRVVSGTFTEFSGSLKKLDRKNG 312

Query: 559 LATVGFILFGKETLADIDSKAIIAET 482
            ATVGF LFGKETL D+D   I+AET
Sbjct: 313 KATVGFTLFGKETLVDLDVNEIVAET 338


>gb|AEG66932.1| plastid transcriptionally active [Gossypium hirsutum]
          Length = 345

 Score =  130 bits (326), Expect = 5e-28
 Identities = 72/143 (50%), Positives = 92/143 (64%), Gaps = 8/143 (5%)
 Frame = -2

Query: 886 KRQINKPRPVDEEDMETMFKQAKEEQEKADQAFEEEQRKNEALDSEKLGVGSPLVSQNLT 707
           KRQINKPRPV  +DME +F+QAK EQEKADQAF+EEQ+   AL S+K+ +   + S  +T
Sbjct: 202 KRQINKPRPVSVDDMEAIFRQAKVEQEKADQAFQEEQQGENALMSDKMNIEYNVDSNGVT 261

Query: 706 QTNASKNPGGRGRKSARV--------PSLKPGSTVHVTSGSFAGFSGTLKKLDVKMGLAT 551
            +     P  + +K +            L PGS V V SG+FA F G+LKKL+ K G AT
Sbjct: 262 SSVLDTKPKRQTKKKSDTVVNGAKYSKQLVPGSKVRVLSGNFAEFIGSLKKLNRKTGKAT 321

Query: 550 VGFILFGKETLADIDSKAIIAET 482
           VGF LFGKETL D+D K ++ ET
Sbjct: 322 VGFTLFGKETLVDLDVKDVVLET 344


>ref|XP_002308199.1| predicted protein [Populus trichocarpa] gi|222854175|gb|EEE91722.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  122 bits (307), Expect = 8e-26
 Identities = 72/142 (50%), Positives = 92/142 (64%), Gaps = 8/142 (5%)
 Frame = -2

Query: 886 KRQINKPRPVDEEDMETMFKQAKEEQEKADQAFEEEQRKNEALDSEKLGVGSPLVSQNLT 707
           KRQINKPRPV ++DME +F+QAKEEQEKAD  FEEEQ+   AL+S KL  GS  ++Q+  
Sbjct: 203 KRQINKPRPVSDDDMEAVFQQAKEEQEKADIGFEEEQQAQGALNSVKL--GSNNITQSFI 260

Query: 706 QTNASKN--------PGGRGRKSARVPSLKPGSTVHVTSGSFAGFSGTLKKLDVKMGLAT 551
            +N+ +              RK   +P  K GSTV V SG+FA F G+LKKL+ K G AT
Sbjct: 261 DSNSERGLRKISGPLVSSSSRKKGDLP--KTGSTVRVVSGTFADFVGSLKKLNRKTGKAT 318

Query: 550 VGFILFGKETLADIDSKAIIAE 485
           V   LFGKE+L ++D   I+AE
Sbjct: 319 VVVTLFGKESLVELDLSEIVAE 340


>ref|XP_004162753.1| PREDICTED: transcription antitermination protein NusG-like [Cucumis
           sativus]
          Length = 326

 Score =  122 bits (305), Expect = 1e-25
 Identities = 70/135 (51%), Positives = 87/135 (64%)
 Frame = -2

Query: 886 KRQINKPRPVDEEDMETMFKQAKEEQEKADQAFEEEQRKNEALDSEKLGVGSPLVSQNLT 707
           KRQINKP+PV E DME +FK+AK+EQE+ DQAF E++++ EA ++  L            
Sbjct: 200 KRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQE-EAPNTSALKTD--------L 250

Query: 706 QTNASKNPGGRGRKSARVPSLKPGSTVHVTSGSFAGFSGTLKKLDVKMGLATVGFILFGK 527
            TN S     +GR    V +L PGSTV V SG+FA F G+LKKL+ K G  TVGF LFGK
Sbjct: 251 DTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGK 310

Query: 526 ETLADIDSKAIIAET 482
           ETL D+D   II ET
Sbjct: 311 ETLVDLDIGDIIVET 325


>gb|ACJ85315.1| unknown [Medicago truncatula] gi|388503726|gb|AFK39929.1| unknown
           [Medicago truncatula]
          Length = 329

 Score =  121 bits (304), Expect = 2e-25
 Identities = 72/152 (47%), Positives = 93/152 (61%), Gaps = 16/152 (10%)
 Frame = -2

Query: 886 KRQINKPRPVDEEDMETMFKQAKEEQEKADQAFEEEQRK--------NEALDSE------ 749
           K+QINKPRPV E+DME +FKQAK EQE AD+AFEEE++K        N+ L+S+      
Sbjct: 185 KKQINKPRPVAEDDMEAIFKQAKVEQENADKAFEEEEKKAAVNSGNPNKELESDVSKAIV 244

Query: 748 --KLGVGSPLVSQNLTQTNASKNPGGRGRKSARVPSLKPGSTVHVTSGSFAGFSGTLKKL 575
             K   GS   S  LT T  + +       + + P L  GSTV + SGSF GF+GTLKKL
Sbjct: 245 DSKPKRGSRKTSNQLTITEEASS-------AKKKPKLVTGSTVQIISGSFLGFAGTLKKL 297

Query: 574 DVKMGLATVGFILFGKETLADIDSKAIIAETN 479
           + K  +ATV F +FGKE + D+D   I+ ETN
Sbjct: 298 NSKTKMATVHFTMFGKENIVDLDVSEIVPETN 329


Top