BLASTX nr result

ID: Scutellaria23_contig00011165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00011165
         (1051 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containi...   510   e-142
ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containi...   509   e-142
ref|XP_002325369.1| predicted protein [Populus trichocarpa] gi|2...   490   e-136
ref|XP_002522032.1| pentatricopeptide repeat-containing protein,...   483   e-134
ref|XP_002871814.1| pentatricopeptide repeat-containing protein ...   482   e-134

>ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
            mitochondrial [Vitis vinifera]
            gi|296085168|emb|CBI28663.3| unnamed protein product
            [Vitis vinifera]
          Length = 454

 Score =  510 bits (1314), Expect = e-142
 Identities = 243/333 (72%), Positives = 287/333 (86%), Gaps = 1/333 (0%)
 Frame = -1

Query: 1048 WETMWKVVENMKSRNFAISPSVVSFIIEQYGKNGLIDQAVDLFNRLKN-FDCPQTTEVYN 872
            ++ MWK+   M++    +SP+VVS IIE++GK+GL+DQAV++FN+ K+  +CPQT EVYN
Sbjct: 126  FQPMWKIAHQMQT----LSPTVVSSIIEEFGKHGLVDQAVEVFNKAKSALNCPQTIEVYN 181

Query: 871  ALLSALCEVKNFQGAYALIRRMIRKGTVPDKRTYSVLVNGWCSAGKMREAQEFLEEMSEK 692
            +LL ALCEVK F GAYALIRRMIRKG  P+K+TYSVLVNGWC+AGKM+EAQ+FLEEMS K
Sbjct: 182  SLLFALCEVKYFHGAYALIRRMIRKGVTPNKQTYSVLVNGWCAAGKMKEAQDFLEEMSRK 241

Query: 691  GFNPPVRGRDLLIDGLLNAGYLESALGLVRKMTKEGFMPDVGTFNCLAEALCKSGEVDFC 512
            GFNPPVRGRDLL+DGLLNAGYLE+A  +VRKMTKEG  PDV T N + EA+CK+GE +FC
Sbjct: 242  GFNPPVRGRDLLVDGLLNAGYLEAAKEMVRKMTKEGCAPDVETLNSMLEAICKAGEAEFC 301

Query: 511  IDLFRDVCGLGFVPDTGTYKIMITVTSKVGKVDEALRILHRSVEDGHRPFPSLYAPILKA 332
            ID++ DVC LG  P+ GTYKIMI    K G++DEA RILHRS+EDGHRPFPSLYAPI+KA
Sbjct: 302  IDIYNDVCRLGVSPNVGTYKIMIPAACKEGRIDEAFRILHRSIEDGHRPFPSLYAPIIKA 361

Query: 331  LFRRGQFDDAFSFFADMKVKGHPPNRPVYTMLIKMCGRGGRFVEAANHLVEMTESNLLPM 152
            L R GQFDDAF FF+DMKVKGHPPNRPVYTMLI MCGRGGRFV+AAN+LVEMTE NL P+
Sbjct: 362  LCRNGQFDDAFCFFSDMKVKGHPPNRPVYTMLITMCGRGGRFVDAANYLVEMTELNLTPI 421

Query: 151  SQSFDMVTDGLKNCGKHDLARRIEQLEISLRGI 53
            S+ FDMVTDGLKNCGKHDLAR+IEQLE+SLRG+
Sbjct: 422  SRCFDMVTDGLKNCGKHDLARKIEQLEVSLRGV 454


>ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
            mitochondrial-like [Cucumis sativus]
            gi|449518358|ref|XP_004166209.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g18390,
            mitochondrial-like [Cucumis sativus]
          Length = 455

 Score =  509 bits (1310), Expect = e-142
 Identities = 239/333 (71%), Positives = 280/333 (84%), Gaps = 1/333 (0%)
 Frame = -1

Query: 1048 WETMWKVVENMKSRNFAISPSVVSFIIEQYGKNGLIDQAVDLFNRL-KNFDCPQTTEVYN 872
            + TMWKV+  MK++N  ISP  +SFII++YGK GL+D AV +FN+  K+ DCPQT EVYN
Sbjct: 123  YTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYN 182

Query: 871  ALLSALCEVKNFQGAYALIRRMIRKGTVPDKRTYSVLVNGWCSAGKMREAQEFLEEMSEK 692
            ALL ALCEVK F GAYALIRRMIRKG  PDK+TY  LV GWCSAGKM+EAQEFLEEMS+K
Sbjct: 183  ALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMKEAQEFLEEMSQK 242

Query: 691  GFNPPVRGRDLLIDGLLNAGYLESALGLVRKMTKEGFMPDVGTFNCLAEALCKSGEVDFC 512
            GFNPP+RGRDLL++GLLNAGYLESA  +VRKMTKEG +PD+GTFN L + +C SGEVDFC
Sbjct: 243  GFNPPLRGRDLLVEGLLNAGYLESAKDMVRKMTKEGSVPDIGTFNSLIDVICNSGEVDFC 302

Query: 511  IDLFRDVCGLGFVPDTGTYKIMITVTSKVGKVDEALRILHRSVEDGHRPFPSLYAPILKA 332
            I++F +VC LG  PD  TYKI+I  TSKVG++DEA R+LH  +EDGH PFPSLY PILK 
Sbjct: 303  INIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGHVPFPSLYGPILKG 362

Query: 331  LFRRGQFDDAFSFFADMKVKGHPPNRPVYTMLIKMCGRGGRFVEAANHLVEMTESNLLPM 152
            + +RGQFDDAF FF DMK KGHPPNRPVYTMLI MCGRGGRFV+AAN+L+EM E  L P+
Sbjct: 363  MCKRGQFDDAFCFFGDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAELGLPPI 422

Query: 151  SQSFDMVTDGLKNCGKHDLARRIEQLEISLRGI 53
            S+ FDMVTDGLKNCGKHDLA++IEQLE+S+RGI
Sbjct: 423  SRCFDMVTDGLKNCGKHDLAKKIEQLEVSIRGI 455


>ref|XP_002325369.1| predicted protein [Populus trichocarpa] gi|222862244|gb|EEE99750.1|
            predicted protein [Populus trichocarpa]
          Length = 422

 Score =  490 bits (1262), Expect = e-136
 Identities = 230/335 (68%), Positives = 280/335 (83%), Gaps = 4/335 (1%)
 Frame = -1

Query: 1048 WETMWKVVENMKSR---NFAISPSVVSFIIEQYGKNGLIDQAVDLFNRL-KNFDCPQTTE 881
            + +MWK++  +K      F++S   V  IIE+YGK+GLIDQAV++FN+  ++ +C     
Sbjct: 88   YASMWKLIAQVKDNLGDKFSVSSDTVCSIIEEYGKHGLIDQAVEVFNKCSRSLNCQHNVC 147

Query: 880  VYNALLSALCEVKNFQGAYALIRRMIRKGTVPDKRTYSVLVNGWCSAGKMREAQEFLEEM 701
            VYN+LL ALCEVK F GAYAL+RRMIRKG VPDKRTY VLVNGWCS+GK+REA+ FLEEM
Sbjct: 148  VYNSLLFALCEVKMFHGAYALVRRMIRKGIVPDKRTYGVLVNGWCSSGKLREAKGFLEEM 207

Query: 700  SEKGFNPPVRGRDLLIDGLLNAGYLESALGLVRKMTKEGFMPDVGTFNCLAEALCKSGEV 521
            S+KGFNPPVRGRDLLI+GLLNAGYLESA  +VR+M KEG +PDV TFN + EA+C +GEV
Sbjct: 208  SKKGFNPPVRGRDLLIEGLLNAGYLESAKDMVRRMMKEGLVPDVNTFNSMVEAICNAGEV 267

Query: 520  DFCIDLFRDVCGLGFVPDTGTYKIMITVTSKVGKVDEALRILHRSVEDGHRPFPSLYAPI 341
            DFC+D++  VC LGF PD  +YKI+I   SKVG++DEA R+LH  +EDGH+PFPSLYAPI
Sbjct: 268  DFCVDMYHSVCKLGFCPDINSYKILIPAVSKVGRIDEAFRLLHNLIEDGHKPFPSLYAPI 327

Query: 340  LKALFRRGQFDDAFSFFADMKVKGHPPNRPVYTMLIKMCGRGGRFVEAANHLVEMTESNL 161
            +K +FRRGQFDDAF FF++MKVKGHPPNRPVYTM+I MCGRGG+ VEAAN+LVEMTE  L
Sbjct: 328  IKGMFRRGQFDDAFCFFSEMKVKGHPPNRPVYTMMITMCGRGGKHVEAANYLVEMTEIGL 387

Query: 160  LPMSQSFDMVTDGLKNCGKHDLARRIEQLEISLRG 56
            +P+S+ FDMVTDGLKNCGKHDLA+RIEQLE+SLRG
Sbjct: 388  VPISRCFDMVTDGLKNCGKHDLAKRIEQLEVSLRG 422


>ref|XP_002522032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223538836|gb|EEF40436.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 451

 Score =  483 bits (1244), Expect = e-134
 Identities = 226/331 (68%), Positives = 276/331 (83%), Gaps = 2/331 (0%)
 Frame = -1

Query: 1048 WETMWKVVENMKSRN--FAISPSVVSFIIEQYGKNGLIDQAVDLFNRLKNFDCPQTTEVY 875
            + +MWK++  MK +N  F+IS   V  IIE+YG++GLIDQAV++FN+  + +C Q  ++Y
Sbjct: 118  YSSMWKLITQMKDQNPQFSISSETVRSIIEEYGRSGLIDQAVEVFNQCNSLNCEQNVDIY 177

Query: 874  NALLSALCEVKNFQGAYALIRRMIRKGTVPDKRTYSVLVNGWCSAGKMREAQEFLEEMSE 695
            N+LL ALCEVK F GAYAL+RR+IRKG  P+K TYSVLVNGWCS GK +EAQ FLEEMS+
Sbjct: 178  NSLLFALCEVKLFHGAYALVRRLIRKGLAPNKTTYSVLVNGWCSNGKFKEAQLFLEEMSK 237

Query: 694  KGFNPPVRGRDLLIDGLLNAGYLESALGLVRKMTKEGFMPDVGTFNCLAEALCKSGEVDF 515
            KGFNPPVRGRDLLI+GLLNAGY ESA  +V KM+KEGF+PDV TFNCL EA+C SGEVDF
Sbjct: 238  KGFNPPVRGRDLLIEGLLNAGYFESAKEMVFKMSKEGFVPDVNTFNCLIEAICNSGEVDF 297

Query: 514  CIDLFRDVCGLGFVPDTGTYKIMITVTSKVGKVDEALRILHRSVEDGHRPFPSLYAPILK 335
            C+D++  +  LGF PD  +YKI+I   SKVGK+DEA ++L+ S+EDGH+PFP LYAPI+K
Sbjct: 298  CVDMYYSLRKLGFCPDINSYKILIPAVSKVGKIDEAFKLLNNSIEDGHKPFPGLYAPIIK 357

Query: 334  ALFRRGQFDDAFSFFADMKVKGHPPNRPVYTMLIKMCGRGGRFVEAANHLVEMTESNLLP 155
             + RRGQFDDAF FF +MKVKGHPPNRPVYTMLI MCGRGG++VEAAN+LVEMTE  L P
Sbjct: 358  GMCRRGQFDDAFCFFGEMKVKGHPPNRPVYTMLITMCGRGGKYVEAANYLVEMTEMGLTP 417

Query: 154  MSQSFDMVTDGLKNCGKHDLARRIEQLEISL 62
            +S+ FDMVTDGLKNCGKHDLA+RIEQLE+S+
Sbjct: 418  ISRCFDMVTDGLKNCGKHDLAKRIEQLEVSV 448


>ref|XP_002871814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297317651|gb|EFH48073.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 459

 Score =  482 bits (1240), Expect = e-134
 Identities = 231/333 (69%), Positives = 273/333 (81%), Gaps = 1/333 (0%)
 Frame = -1

Query: 1048 WETMWKVVENMKSRNFAISPSVVSFIIEQYGKNGLIDQAVDLFNRL-KNFDCPQTTEVYN 872
            +E+MWK+++ MK  +  IS   + FIIEQYGKNG +DQAV+LFN + K   C QT +VYN
Sbjct: 127  YESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYN 186

Query: 871  ALLSALCEVKNFQGAYALIRRMIRKGTVPDKRTYSVLVNGWCSAGKMREAQEFLEEMSEK 692
            ALL ALC+VK F GAYALIRRMIRKG  PDKRTY++LVNGWCSAGKM+EAQEFL+EMS K
Sbjct: 187  ALLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRK 246

Query: 691  GFNPPVRGRDLLIDGLLNAGYLESALGLVRKMTKEGFMPDVGTFNCLAEALCKSGEVDFC 512
            GFNPP RGRDLLI+GLLNAGYLESA  +V KMTK GF+PD+ TFN L EA+ KSGEV+FC
Sbjct: 247  GFNPPARGRDLLIEGLLNAGYLESAKEIVDKMTKGGFVPDILTFNTLIEAISKSGEVEFC 306

Query: 511  IDLFRDVCGLGFVPDTGTYKIMITVTSKVGKVDEALRILHRSVEDGHRPFPSLYAPILKA 332
            I+++   C LG   D  TYK +I   SK+GK+DEA R+L+  VEDGH+PFPSLYAPI+K 
Sbjct: 307  IEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKG 366

Query: 331  LFRRGQFDDAFSFFADMKVKGHPPNRPVYTMLIKMCGRGGRFVEAANHLVEMTESNLLPM 152
            + R G FDDAFSFF+DMKVK HPPNRPVYTMLI MCGRGG+FV+AAN+LVEMTE  L+P+
Sbjct: 367  MCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPI 426

Query: 151  SQSFDMVTDGLKNCGKHDLARRIEQLEISLRGI 53
            S+ FDMVTDGLKN GKHDLA RIEQLE+ LRG+
Sbjct: 427  SRCFDMVTDGLKNSGKHDLAMRIEQLEVQLRGV 459


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