BLASTX nr result
ID: Scutellaria23_contig00011129
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria23_contig00011129
(811 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI27869.3| unnamed protein product [Vitis vinifera] 152 5e-62
ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation spec... 152 5e-62
ref|XP_002308275.1| predicted protein [Populus trichocarpa] gi|2... 135 1e-54
ref|NP_567835.1| CFIM-25-like protein [Arabidopsis thaliana] gi|... 134 8e-54
ref|XP_002867386.1| hypothetical protein ARALYDRAFT_491776 [Arab... 131 2e-53
>emb|CBI27869.3| unnamed protein product [Vitis vinifera]
Length = 291
Score = 152 bits (385), Expect(3) = 5e-62
Identities = 67/85 (78%), Positives = 76/85 (89%)
Frame = +2
Query: 2 VELFKHPHLLLLQVQNSIYKFPGGRLRPGESDIDCLKRKLSNKLSAGEDGRGPEWEVGEC 181
VELFKHPHLLLLQV+NS +K PGGRLRPGES+I+ LKRKLS KLS EDG G +WEVGEC
Sbjct: 147 VELFKHPHLLLLQVKNSFFKLPGGRLRPGESEINGLKRKLSRKLSVNEDGDGSDWEVGEC 206
Query: 182 LGIWWKPDFESLLYPYLPPNIKRPK 256
LG+WW+PDFE+LLYPYLPPN+K PK
Sbjct: 207 LGMWWRPDFETLLYPYLPPNVKNPK 231
Score = 82.0 bits (201), Expect(3) = 5e-62
Identities = 34/44 (77%), Positives = 42/44 (95%)
Frame = +1
Query: 316 PNIKRPKECTKLYVVKLPPSRRFIVPKNFRLLAIPLCQLHDNEE 447
PN+K PKECTKL++VKLPPSR+FIVPKN +LLAIPLCQLH+N++
Sbjct: 225 PNVKNPKECTKLFLVKLPPSRKFIVPKNLKLLAIPLCQLHENDK 268
Score = 51.2 bits (121), Expect(3) = 5e-62
Identities = 20/29 (68%), Positives = 27/29 (93%)
Frame = +3
Query: 522 QLHDNEETYGPIVSGAPQLLSKFTFNFIE 608
QLH+N++TYGPI++G PQLLSKF+FN I+
Sbjct: 262 QLHENDKTYGPIIAGVPQLLSKFSFNIID 290
>ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Vitis vinifera]
Length = 284
Score = 152 bits (385), Expect(3) = 5e-62
Identities = 67/85 (78%), Positives = 76/85 (89%)
Frame = +2
Query: 2 VELFKHPHLLLLQVQNSIYKFPGGRLRPGESDIDCLKRKLSNKLSAGEDGRGPEWEVGEC 181
VELFKHPHLLLLQV+NS +K PGGRLRPGES+I+ LKRKLS KLS EDG G +WEVGEC
Sbjct: 140 VELFKHPHLLLLQVKNSFFKLPGGRLRPGESEINGLKRKLSRKLSVNEDGDGSDWEVGEC 199
Query: 182 LGIWWKPDFESLLYPYLPPNIKRPK 256
LG+WW+PDFE+LLYPYLPPN+K PK
Sbjct: 200 LGMWWRPDFETLLYPYLPPNVKNPK 224
Score = 82.0 bits (201), Expect(3) = 5e-62
Identities = 34/44 (77%), Positives = 42/44 (95%)
Frame = +1
Query: 316 PNIKRPKECTKLYVVKLPPSRRFIVPKNFRLLAIPLCQLHDNEE 447
PN+K PKECTKL++VKLPPSR+FIVPKN +LLAIPLCQLH+N++
Sbjct: 218 PNVKNPKECTKLFLVKLPPSRKFIVPKNLKLLAIPLCQLHENDK 261
Score = 51.2 bits (121), Expect(3) = 5e-62
Identities = 20/29 (68%), Positives = 27/29 (93%)
Frame = +3
Query: 522 QLHDNEETYGPIVSGAPQLLSKFTFNFIE 608
QLH+N++TYGPI++G PQLLSKF+FN I+
Sbjct: 255 QLHENDKTYGPIIAGVPQLLSKFSFNIID 283
>ref|XP_002308275.1| predicted protein [Populus trichocarpa] gi|222854251|gb|EEE91798.1|
predicted protein [Populus trichocarpa]
Length = 210
Score = 135 bits (340), Expect(3) = 1e-54
Identities = 62/85 (72%), Positives = 71/85 (83%)
Frame = +2
Query: 2 VELFKHPHLLLLQVQNSIYKFPGGRLRPGESDIDCLKRKLSNKLSAGEDGRGPEWEVGEC 181
VELFKHPHLLLLQV+N+ +K PGGRLRPGESDID L+RKLS LS ED WEVG+C
Sbjct: 68 VELFKHPHLLLLQVRNAFFKLPGGRLRPGESDIDGLQRKLSRMLSVNED-ETDHWEVGDC 126
Query: 182 LGIWWKPDFESLLYPYLPPNIKRPK 256
LG+WW+ DFE+LLYPYLPPN+K PK
Sbjct: 127 LGMWWRSDFETLLYPYLPPNLKVPK 151
Score = 77.8 bits (190), Expect(3) = 1e-54
Identities = 33/44 (75%), Positives = 40/44 (90%)
Frame = +1
Query: 316 PNIKRPKECTKLYVVKLPPSRRFIVPKNFRLLAIPLCQLHDNEE 447
PN+K PKECTKLYVVKLP SR+FIVPKN +LLA+PLCQ+H+N +
Sbjct: 145 PNLKVPKECTKLYVVKLPASRKFIVPKNLKLLAVPLCQVHENHK 188
Score = 47.8 bits (112), Expect(3) = 1e-54
Identities = 18/26 (69%), Positives = 24/26 (92%)
Frame = +3
Query: 522 QLHDNEETYGPIVSGAPQLLSKFTFN 599
Q+H+N +TYGP++SG PQLLSKF+FN
Sbjct: 182 QVHENHKTYGPVISGVPQLLSKFSFN 207
>ref|NP_567835.1| CFIM-25-like protein [Arabidopsis thaliana]
gi|15081674|gb|AAK82492.1| AT4g29820/F27B13_60
[Arabidopsis thaliana] gi|20147173|gb|AAM10303.1|
AT4g29820/F27B13_60 [Arabidopsis thaliana]
gi|21554114|gb|AAM63194.1| mRNA cleavage factor
subunit-like protein [Arabidopsis thaliana]
gi|332660282|gb|AEE85682.1| CFIM-25-like protein
[Arabidopsis thaliana]
Length = 222
Score = 134 bits (336), Expect(3) = 8e-54
Identities = 59/85 (69%), Positives = 74/85 (87%)
Frame = +2
Query: 2 VELFKHPHLLLLQVQNSIYKFPGGRLRPGESDIDCLKRKLSNKLSAGEDGRGPEWEVGEC 181
VELFKHPH+LLLQ +NSI+K PGGRLRPGESDI+ LKRKL++KLS E+ +EVGEC
Sbjct: 78 VELFKHPHVLLLQYRNSIFKLPGGRLRPGESDIEGLKRKLASKLSVNENVGVSGYEVGEC 137
Query: 182 LGIWWKPDFESLLYPYLPPNIKRPK 256
+G+WW+P+FE+L+YP+LPPNIK PK
Sbjct: 138 IGMWWRPNFETLMYPFLPPNIKHPK 162
Score = 76.6 bits (187), Expect(3) = 8e-54
Identities = 31/44 (70%), Positives = 41/44 (93%)
Frame = +1
Query: 316 PNIKRPKECTKLYVVKLPPSRRFIVPKNFRLLAIPLCQLHDNEE 447
PNIK PKECTKL++V+LP ++F+VPKNF+LLA+PLCQLH+NE+
Sbjct: 156 PNIKHPKECTKLFLVRLPVHQQFVVPKNFKLLAVPLCQLHENEK 199
Score = 47.8 bits (112), Expect(3) = 8e-54
Identities = 20/29 (68%), Positives = 26/29 (89%)
Frame = +3
Query: 522 QLHDNEETYGPIVSGAPQLLSKFTFNFIE 608
QLH+NE+TYGPI+S P+LLSKF+FN +E
Sbjct: 193 QLHENEKTYGPIMSQIPKLLSKFSFNMME 221
>ref|XP_002867386.1| hypothetical protein ARALYDRAFT_491776 [Arabidopsis lyrata subsp.
lyrata] gi|297313222|gb|EFH43645.1| hypothetical protein
ARALYDRAFT_491776 [Arabidopsis lyrata subsp. lyrata]
Length = 223
Score = 131 bits (329), Expect(3) = 2e-53
Identities = 57/85 (67%), Positives = 73/85 (85%)
Frame = +2
Query: 2 VELFKHPHLLLLQVQNSIYKFPGGRLRPGESDIDCLKRKLSNKLSAGEDGRGPEWEVGEC 181
VEL KHPH+LLLQ +NSI+K PGGRLRPGESDI+ +KRKL++KLS E+ P EVGEC
Sbjct: 79 VELLKHPHVLLLQYRNSIFKLPGGRLRPGESDIEGVKRKLASKLSVNENVVVPGLEVGEC 138
Query: 182 LGIWWKPDFESLLYPYLPPNIKRPK 256
+G+WW+P+FE+L+YP+LPPN+K PK
Sbjct: 139 IGMWWRPNFETLMYPFLPPNVKHPK 163
Score = 77.0 bits (188), Expect(3) = 2e-53
Identities = 30/44 (68%), Positives = 42/44 (95%)
Frame = +1
Query: 316 PNIKRPKECTKLYVVKLPPSRRFIVPKNFRLLAIPLCQLHDNEE 447
PN+K PKECTKL++V+LP +++F+VPKNF+LLA+PLCQLH+NE+
Sbjct: 157 PNVKHPKECTKLFLVRLPVNQQFVVPKNFKLLAVPLCQLHENEK 200
Score = 48.5 bits (114), Expect(3) = 2e-53
Identities = 20/29 (68%), Positives = 26/29 (89%)
Frame = +3
Query: 522 QLHDNEETYGPIVSGAPQLLSKFTFNFIE 608
QLH+NE+TYGPI+S P+LLSKF+FN +E
Sbjct: 194 QLHENEKTYGPIISQIPKLLSKFSFNMME 222