BLASTX nr result

ID: Scutellaria23_contig00010999 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00010999
         (2446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511843.1| DNA binding protein, putative [Ricinus commu...   218   5e-54
ref|XP_002320785.1| predicted protein [Populus trichocarpa] gi|2...   218   5e-54
gb|ABO42262.1| AT-hook DNA-binding protein [Gossypium hirsutum]       210   1e-51
ref|XP_002510850.1| conserved hypothetical protein [Ricinus comm...   135   4e-51
ref|XP_002302577.1| predicted protein [Populus trichocarpa] gi|2...   206   2e-50

>ref|XP_002511843.1| DNA binding protein, putative [Ricinus communis]
            gi|223549023|gb|EEF50512.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 340

 Score =  218 bits (556), Expect = 5e-54
 Identities = 142/324 (43%), Positives = 177/324 (54%), Gaps = 20/324 (6%)
 Frame = -3

Query: 2084 MDQRDAMTLAGSGSYYVHQS---TGEGLQSSPNMSPGVH--------FQSNXXXXXXXXX 1938
            MD+RDAM ++GS S+Y+ +    +G G QS  N+S G++        FQSN         
Sbjct: 1    MDRRDAMAMSGSASFYMQRGMTGSGSGTQSGLNVSSGINPLTSTNVSFQSNVGANTIGST 60

Query: 1937 XXXXXXXTMSGHGVSVGPHAMQQ--GEPVRRKRGRPRKYGHDGAVSLGLXXXXXXXXXXX 1764
                    +  HGV+VG  ++    GEPV+RKRGRPRKYG DG VSL L           
Sbjct: 61   LPLETSTAIPPHGVNVGASSLMPPPGEPVKRKRGRPRKYGPDGTVSLALSPSLSTHPGTI 120

Query: 1763 XXXSQKWRGRPPGTGRKQQPSSLGGSVFTGAGT-MTPHIINIAAGEDIKRKILSLLQG-- 1593
                ++ RGRPPGTGRKQQ +SLG  +   AG   TPHII IA GEDI  KI+S  Q   
Sbjct: 121  TPTQKRGRGRPPGTGRKQQLASLGEWLSGSAGMGFTPHIITIAVGEDIATKIMSFSQQGP 180

Query: 1592 RRXXXXXXXXXXXXXXXXXXXXXXXSVTYEGHFDMVNLSGSY-INDVDGPHGPTGGLNVT 1416
            R                        SVTYEG F+++ LSGSY +    G    TGGL+V+
Sbjct: 181  RAICILSANGAVSTVTLRQPSTSGGSVTYEGRFEILCLSGSYLVTSNGGSRNRTGGLSVS 240

Query: 1415 FSGPDGRLIGGPVEGLLIAASPVQVIAGSMLAFTSKPKNKAVEDPEYPGDFDRSILGNSV 1236
             + PDGR+IGG V G+LIAASPVQVI GS L   SK KNK  E PE   D D   + N V
Sbjct: 241  LASPDGRVIGGGVGGMLIAASPVQVIVGSFLWGGSKAKNKKGEGPEGARDSDHQTVENPV 300

Query: 1235 SQANVQTSQNLNP---MGAWPGSR 1173
            + ++V  SQNL P   +G WPGS+
Sbjct: 301  TPSSVPPSQNLTPTSSIGLWPGSQ 324


>ref|XP_002320785.1| predicted protein [Populus trichocarpa] gi|222861558|gb|EEE99100.1|
            predicted protein [Populus trichocarpa]
          Length = 336

 Score =  218 bits (556), Expect = 5e-54
 Identities = 147/324 (45%), Positives = 178/324 (54%), Gaps = 20/324 (6%)
 Frame = -3

Query: 2084 MDQRDAMTLAGSGSYYVHQSTGEGLQSSPNMS----------PGVHFQSNXXXXXXXXXX 1935
            MD+RDAM ++GS S+Y+H+    G+ SS +M+            V FQ N          
Sbjct: 1    MDRRDAMAISGSASFYMHR----GITSSGSMNVSSNINTLSNTNVAFQPNIGANTMGSTL 56

Query: 1934 XXXXXXTMSGHGVSVG-PHAMQ-QGEPVRRKRGRPRKYGHDGAVSLGLXXXXXXXXXXXX 1761
                   +S HGV+VG P  M   GEPV+RKRGRPRKYG DGAVSL L            
Sbjct: 57   PMEHPVAISPHGVNVGVPSTMPPSGEPVKRKRGRPRKYGPDGAVSLALSSSLSTHPGTIT 116

Query: 1760 XXSQKWRGRPPGTGRKQQPSSLGGSVFTGAGT-MTPHIINIAAGEDIKRKILSLLQ--GR 1590
               ++ RGRPPGTGRKQQ +SLG  +   AG   TPHII IA GEDI  KI+S  Q   R
Sbjct: 117  PSQKRGRGRPPGTGRKQQLASLGEWLSGSAGMGFTPHIITIAVGEDIATKIMSFSQQGPR 176

Query: 1589 RXXXXXXXXXXXXXXXXXXXXXXXSVTYEGHFDMVNLSGSYINDVD-GPHGPTGGLNVTF 1413
                                    +VTYEG F+++ LSGSY+   D G    +GGL+V+ 
Sbjct: 177  AVCILSANGAVSTVTLRQPSTSGGTVTYEGRFEILCLSGSYLLTNDGGSRNRSGGLSVSL 236

Query: 1412 SGPDGRLIGGPVEGLLIAASPVQVIAGSML-AFTSKPKNKAVEDPEYPGDFDRSILGNSV 1236
            + PDGR+IGG V G+LIAASPVQVI GS L    SK KNK VE PE   D D   + N V
Sbjct: 237  ASPDGRVIGGGVGGVLIAASPVQVIVGSFLWGGGSKTKNKKVEGPEGARDSDHQTVENPV 296

Query: 1235 SQANVQTSQNLNP---MGAWPGSR 1173
            +  +VQ SQNL P   MG WPGSR
Sbjct: 297  TPTSVQPSQNLTPTSSMGVWPGSR 320


>gb|ABO42262.1| AT-hook DNA-binding protein [Gossypium hirsutum]
          Length = 340

 Score =  210 bits (535), Expect = 1e-51
 Identities = 139/324 (42%), Positives = 173/324 (53%), Gaps = 20/324 (6%)
 Frame = -3

Query: 2084 MDQRDAMTLAGSGSYYVHQ----STGEGLQSSPNMSPGVH--------FQSNXXXXXXXX 1941
            MD+RDAM L+GS SYY+ Q     +G G QS  + SPG+H        +QS+        
Sbjct: 1    MDRRDAMALSGSASYYMQQRGITGSGSGTQSGVHGSPGIHPLSSPNVQYQSSISATTMGA 60

Query: 1940 XXXXXXXXTMSGHGVSVG-PHAMQQGEPVRRKRGRPRKYGHDGAVSLGLXXXXXXXXXXX 1764
                     ++ H V+VG P A+Q GE V+RKRGRPRKYG DG VSL L           
Sbjct: 61   TLPVEPLSGITPHNVNVGTPPAVQPGETVKRKRGRPRKYGPDGTVSLALTPASATHPGTI 120

Query: 1763 XXXSQKWRGRPPGTGRKQQPSSLGGSVFTGAGT-MTPHIINIAAGEDIKRKILSLLQ--G 1593
                ++ RGRPPGTGRKQQ SSLG  +   AG   TPH+I IA GEDI  K++S  Q   
Sbjct: 121  TPIQKRGRGRPPGTGRKQQLSSLGELLSGSAGMGFTPHVITIAIGEDIATKLMSFSQQGP 180

Query: 1592 RRXXXXXXXXXXXXXXXXXXXXXXXSVTYEGHFDMVNLSGSY-INDVDGPHGPTGGLNVT 1416
            R                        +VTYEG F+++ LSGSY +    G    TGGL+V+
Sbjct: 181  REVCILSANGAVSTVTLRKPSSSGGTVTYEGRFEILCLSGSYLLTSNTGSRNRTGGLSVS 240

Query: 1415 FSGPDGRLIGGPVEGLLIAASPVQVIAGSMLAFTSKPKNKAVEDPEYPGDFDRSILGNSV 1236
             + PDGR IGG V G+LIAASPVQVI GS +   SK KNK     E   D D  ++ N V
Sbjct: 241  LASPDGRAIGGGVGGMLIAASPVQVIVGSFIWGGSKAKNKK-GGQEGIKDSDDQMVDNLV 299

Query: 1235 SQANVQTSQNLN---PMGAWPGSR 1173
            +   +  SQN+    P G WPGSR
Sbjct: 300  APPGISPSQNMTPSAPAGVWPGSR 323


>ref|XP_002510850.1| conserved hypothetical protein [Ricinus communis]
           gi|223549965|gb|EEF51452.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 240

 Score =  135 bits (339), Expect(2) = 4e-51
 Identities = 64/86 (74%), Positives = 74/86 (86%)
 Frame = +1

Query: 589 VELALKAKFWFSVGSLYRAPPLLVKTVLTSEESKGKMRGGKGERLDKEGRCKLVGVATVE 768
           V+L   AKFWFSVGS+Y+AP LLVKTVLTSEES G +R  +GERLD+EG+C+LVGVATVE
Sbjct: 150 VDLEFMAKFWFSVGSIYKAPSLLVKTVLTSEESNGVIRSARGERLDREGKCRLVGVATVE 209

Query: 769 PVDDLFMDAFLGLPTECLAVLNAIIS 846
           P+DD FM+ FLGLPTECLA LNA IS
Sbjct: 210 PIDDFFMNTFLGLPTECLANLNAFIS 235



 Score = 95.5 bits (236), Expect(2) = 4e-51
 Identities = 56/136 (41%), Positives = 78/136 (57%), Gaps = 12/136 (8%)
 Frame = +2

Query: 134 CNTHTLNPQLVWK------RIRSKNFSTSSSFQPNPTNTINQTSK--PDVQHNVIKLKTL 289
           C  +TL+P  ++K         SK  + SSS  PN   +I+ T+   P   +  +  KTL
Sbjct: 3   CRINTLHPPSLYKFSARKPSFTSKIIAFSSSTPPNQVVSISTTTSTFPKTDNYTVNFKTL 62

Query: 290 GGCKLGVSRYPDFDYNAEGGAGSGMAT----TSISDGQVHVDFDVQKVNIPPLSTATTKX 457
             CKLG+SRYPDF+YNAEGG G+G AT    T ++D ++ V FD++ + IPPL++ TTK 
Sbjct: 63  EACKLGISRYPDFEYNAEGGTGTGFATKIKKTDLND-EISVSFDLKTLYIPPLTSGTTKF 121

Query: 458 XXXXXXXXXKIDIVTE 505
                    KIDIV E
Sbjct: 122 LGLPMPPGLKIDIVPE 137


>ref|XP_002302577.1| predicted protein [Populus trichocarpa] gi|222844303|gb|EEE81850.1|
            predicted protein [Populus trichocarpa]
          Length = 328

 Score =  206 bits (525), Expect = 2e-50
 Identities = 138/315 (43%), Positives = 169/315 (53%), Gaps = 11/315 (3%)
 Frame = -3

Query: 2084 MDQRDAMTLAGSGSYYVHQSTGEGLQSSPNMSPGVHFQSNXXXXXXXXXXXXXXXXTMSG 1905
            MD+RD MT++GS S+++    G G   S N+S G++  SN                 +  
Sbjct: 1    MDRRDTMTISGSASFFMQ---GSGTHPSLNVSSGINTLSNINAPFQPNMGANTMGSALLM 57

Query: 1904 H---GVSVGP-HAMQQGEPVRRKRGRPRKYGHDGAVSLGLXXXXXXXXXXXXXXSQKWRG 1737
                 +SVG    M  G+P +RKRGRPRKYG DGAVSL L               ++ RG
Sbjct: 58   EHPAAISVGELSTMVSGQPEKRKRGRPRKYGPDGAVSLALSPSLSTHPETSIPSQKRGRG 117

Query: 1736 RPPGTGRKQQPSSLGGSVFTGAGT-MTPHIINIAAGEDIKRKILSLLQG--RRXXXXXXX 1566
            RPPGTGRKQQ +SLG  +   AG   TPHII IA GEDI  KI+S  Q   R        
Sbjct: 118  RPPGTGRKQQLASLGEWLSGSAGMGFTPHIITIAVGEDIATKIMSFSQQGPRAICILSAN 177

Query: 1565 XXXXXXXXXXXXXXXXSVTYEGHFDMVNLSGSYINDVDG-PHGPTGGLNVTFSGPDGRLI 1389
                            +VTYEG F+++ LSGSY+   DG     TGGL+V+ + PDG +I
Sbjct: 178  GAVSTVTLHQPSTSGGTVTYEGRFEILCLSGSYLFSNDGGSRNRTGGLSVSLASPDGCVI 237

Query: 1388 GGPVEGLLIAASPVQVIAGSMLAFTSKPKNKAVEDPEYPGDFDRSILGNSVSQANVQTSQ 1209
            GG V G+LIAASPVQVIAGS L   SK KNK VE  E   D D   + N V+  +VQ S 
Sbjct: 238  GGGVGGVLIAASPVQVIAGSFLWGGSKTKNKKVEGAEVARDSDHQTVENPVTPTSVQPSL 297

Query: 1208 NLNP---MGAWPGSR 1173
            NL P   MG WPGSR
Sbjct: 298  NLTPTSSMGVWPGSR 312


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