BLASTX nr result

ID: Scutellaria23_contig00010852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00010852
         (1225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277519.1| PREDICTED: F-box protein SKIP1 [Vitis vinifera]   455   e-125
ref|XP_003519156.1| PREDICTED: F-box protein SKIP1-like isoform ...   426   e-117
ref|XP_002325124.1| f-box family protein [Populus trichocarpa] g...   423   e-116
ref|XP_003610294.1| F-box protein SKIP1 [Medicago truncatula] gi...   421   e-115
gb|ACJ84674.1| unknown [Medicago truncatula] gi|388515861|gb|AFK...   420   e-115

>ref|XP_002277519.1| PREDICTED: F-box protein SKIP1 [Vitis vinifera]
          Length = 308

 Score =  455 bits (1170), Expect = e-125
 Identities = 215/295 (72%), Positives = 247/295 (83%), Gaps = 1/295 (0%)
 Frame = +3

Query: 60  ADWAELTHECLINILSRLSLEDRWRATMRVCKAWHQACKDPCLNSTLDLESHFDSAAELP 239
           +DW+ELTHECL N+LSRL+L DRW   M VCK+W  ACKDP L STLDLE HFDS  E  
Sbjct: 14  SDWSELTHECLTNVLSRLTLHDRWTGPMLVCKSWLHACKDPSLFSTLDLEVHFDSPTESA 73

Query: 240 RFWTPDFERRIDNMLGSVAVWAAGCLTEIRVRHCSDRSLSLVAKRCPNLQVLSIKSSPHV 419
           R+WTP+FER+ID ML S+A W+ G +TEIRVRHCSDRSLS  A RC NL+VLSIKS P+V
Sbjct: 74  RWWTPEFERKIDAMLRSIAEWSGGSITEIRVRHCSDRSLSFAADRCSNLEVLSIKSCPNV 133

Query: 420 TDAVMAAIASGCPKIKELDVSYCYEISHSSLAIVGSHCP-VRVLKRNLMNWLDPSQHTGI 596
           TDA MA +A  C K++E+D+SYCYEISH SL ++G +CP +++LKRNLMNWLDPSQH GI
Sbjct: 134 TDASMARVAFRCLKLREVDISYCYEISHESLILLGRNCPNLKILKRNLMNWLDPSQHIGI 193

Query: 597 VPNEYLNACPQDGDSEAAAISKLMSHLLHLELRFSKMTAKGLTLISQGCQDLEYVDLSGC 776
           VPNEYLNACPQDGDSEAAAI K M HL HLELRFSK++AKGL LI  GC +LEY+DLSGC
Sbjct: 194 VPNEYLNACPQDGDSEAAAIGKTMPHLEHLELRFSKISAKGLALICDGCLNLEYLDLSGC 253

Query: 777 ANVTSRDIANASSNLKKLKTIIKPNFYIPRSVFHTERYGHWRLYEERFQTDVFRI 941
           AN+TSRDIANA+SNLK LK I KPNFYIPRSVFH ERYGHWRLY++RFQTD FRI
Sbjct: 254 ANLTSRDIANATSNLKNLKKIEKPNFYIPRSVFHAERYGHWRLYDDRFQTDTFRI 308


>ref|XP_003519156.1| PREDICTED: F-box protein SKIP1-like isoform 1 [Glycine max]
          Length = 306

 Score =  426 bits (1095), Expect = e-117
 Identities = 202/304 (66%), Positives = 243/304 (79%), Gaps = 1/304 (0%)
 Frame = +3

Query: 33  TECDGIAAAADWAELTHECLINILSRLSLEDRWRATMRVCKAWHQACKDPCLNSTLDLES 212
           TE +     +DW+ELT ECLINILSRLS+EDRWR TM VCK+W    K+P L+   +L+ 
Sbjct: 3   TETEPNETESDWSELTRECLINILSRLSVEDRWRGTMLVCKSWFSVFKEPSLHFVFNLDP 62

Query: 213 HFDSAAELPRFWTPDFERRIDNMLGSVAVWAAGCLTEIRVRHCSDRSLSLVAKRCPNLQV 392
            FDS  E  R+WTP+FE +IDNML SV  WA   LT IR+RHCSDRSL+LVA+ CPNL+V
Sbjct: 63  QFDSPTESTRWWTPEFEAKIDNMLRSVVEWAQSSLTHIRIRHCSDRSLALVAQSCPNLEV 122

Query: 393 LSIKSSPHVTDAVMAAIASGCPKIKELDVSYCYEISHSSLAIVGSHCP-VRVLKRNLMNW 569
           L I+S P VTD  ++ IA  CPK++ELD+SYCYEI+H SL ++G +CP ++VLKRNLMNW
Sbjct: 123 LFIRSCPRVTDDSISRIALSCPKLRELDISYCYEITHESLVLIGRNCPNLKVLKRNLMNW 182

Query: 570 LDPSQHTGIVPNEYLNACPQDGDSEAAAISKLMSHLLHLELRFSKMTAKGLTLISQGCQD 749
           LDPSQH GIVP++YLNACPQDGD EAAAI+  M  L  LE+RFSK+TAKGL  I QGC +
Sbjct: 183 LDPSQHRGIVPDDYLNACPQDGDDEAAAIANSMPGLEQLEIRFSKLTAKGLNSICQGCPN 242

Query: 750 LEYVDLSGCANVTSRDIANASSNLKKLKTIIKPNFYIPRSVFHTERYGHWRLYEERFQTD 929
           LE++DLSGCAN+TSRDIANASS+L  LK I KPNFYIPRSVFHTERYGHW LY+ERFQTD
Sbjct: 243 LEFLDLSGCANLTSRDIANASSSLVHLKEIKKPNFYIPRSVFHTERYGHWSLYDERFQTD 302

Query: 930 VFRI 941
           +F+I
Sbjct: 303 IFQI 306


>ref|XP_002325124.1| f-box family protein [Populus trichocarpa]
           gi|222866558|gb|EEF03689.1| f-box family protein
           [Populus trichocarpa]
          Length = 314

 Score =  423 bits (1087), Expect = e-116
 Identities = 206/310 (66%), Positives = 243/310 (78%), Gaps = 2/310 (0%)
 Frame = +3

Query: 18  DDENATECDGIAAA-ADWAELTHECLINILSRLSLEDRWRATMRVCKAWHQACKDPCLNS 194
           +D +  E D  +   ADWAELT+ECLI ILSRL+ E RWR  M VCK W  ACKDP LN+
Sbjct: 5   EDTDVVETDAESGLIADWAELTYECLIIILSRLTFEHRWRGPMLVCKGWLIACKDPSLNT 64

Query: 195 TLDLESHFDSAAELPRFWTPDFERRIDNMLGSVAVWAAGCLTEIRVRHCSDRSLSLVAKR 374
             DL++ FDS  E PR+WTPDFER+ID+ML SV  ++ G LTEIR +HCSD S++  A+R
Sbjct: 65  LFDLDTQFDSVIESPRWWTPDFERKIDSMLVSVITFSDGSLTEIRTQHCSDLSVTFAAER 124

Query: 375 CPNLQVLSIKSSPHVTDAVMAAIASGCPKIKELDVSYCYEISHSSLAIVGSHCP-VRVLK 551
           C NLQVLSIKS  +VTDA MA IA  C K+KELD+SYC+EISH SL ++G +CP +RVLK
Sbjct: 125 CSNLQVLSIKSCRNVTDASMAQIAYKCAKLKELDISYCFEISHESLVMMGRNCPNLRVLK 184

Query: 552 RNLMNWLDPSQHTGIVPNEYLNACPQDGDSEAAAISKLMSHLLHLELRFSKMTAKGLTLI 731
           RN MNWLD S+H GIVP+ YLN CPQDGD EA AI K M +L+HLELRFSKM+AKGL  I
Sbjct: 185 RNQMNWLDASEHVGIVPDSYLNTCPQDGDCEAGAIGKYMPNLVHLELRFSKMSAKGLVSI 244

Query: 732 SQGCQDLEYVDLSGCANVTSRDIANASSNLKKLKTIIKPNFYIPRSVFHTERYGHWRLYE 911
            +GC +LEY+DLSGCAN+TSRDI  A+  LK LK I KPNFYIPRSVFHTERYGHWRLY+
Sbjct: 245 CEGCLNLEYLDLSGCANLTSRDIVKATLGLKNLKEIKKPNFYIPRSVFHTERYGHWRLYD 304

Query: 912 ERFQTDVFRI 941
           ERFQTD+FRI
Sbjct: 305 ERFQTDIFRI 314


>ref|XP_003610294.1| F-box protein SKIP1 [Medicago truncatula]
           gi|355511349|gb|AES92491.1| F-box protein SKIP1
           [Medicago truncatula]
          Length = 302

 Score =  421 bits (1083), Expect = e-115
 Identities = 200/300 (66%), Positives = 244/300 (81%), Gaps = 2/300 (0%)
 Frame = +3

Query: 48  IAAAADWAELTHECLINILSRLSLEDRWRATMRVCKAWHQACKD-PCLNSTLDLESHFDS 224
           + + A+W ELT ECLINILSRLS ED+WR ++ VCK+W  A K+ P L+S  +L+ +FD 
Sbjct: 3   VESEAEWGELTRECLINILSRLSFEDQWRGSLLVCKSWFNAFKEEPSLHSVFNLDPYFDK 62

Query: 225 AAELPRFWTPDFERRIDNMLGSVAVWAAGCLTEIRVRHCSDRSLSLVAKRCPNLQVLSIK 404
             E PR+WT  FE +ID+ML S+  W    LT+IR+RHCSDRSL+LVA+RCPNL+VLSI+
Sbjct: 63  PLESPRWWTLQFESQIDSMLRSIVQWTHIFLTQIRIRHCSDRSLALVAQRCPNLEVLSIR 122

Query: 405 SSPHVTDAVMAAIASGCPKIKELDVSYCYEISHSSLAIVGSHCP-VRVLKRNLMNWLDPS 581
           S P VTD  M+ IA+GCP ++ELD+SYCYEI+H SL ++G +C  ++VLKRNLMNWLDPS
Sbjct: 123 SCPRVTDDSMSKIATGCPNLRELDISYCYEITHESLVLIGRNCSNIKVLKRNLMNWLDPS 182

Query: 582 QHTGIVPNEYLNACPQDGDSEAAAISKLMSHLLHLELRFSKMTAKGLTLISQGCQDLEYV 761
           QH GIVP++YLNACPQDGDSEAAAI+  M HL  LE+RFSK+TAKGL  I QGC +LE++
Sbjct: 183 QHVGIVPDDYLNACPQDGDSEAAAIANSMPHLEGLEIRFSKLTAKGLNSICQGCPNLEFL 242

Query: 762 DLSGCANVTSRDIANASSNLKKLKTIIKPNFYIPRSVFHTERYGHWRLYEERFQTDVFRI 941
           DLSGCAN+TSRDIA ASS+L  LK I KPNFYIPRSVFHTERYGHW LY+ERFQTDVFRI
Sbjct: 243 DLSGCANLTSRDIAKASSSLSHLKDIKKPNFYIPRSVFHTERYGHWSLYDERFQTDVFRI 302


>gb|ACJ84674.1| unknown [Medicago truncatula] gi|388515861|gb|AFK45992.1| unknown
           [Medicago truncatula]
          Length = 302

 Score =  420 bits (1079), Expect = e-115
 Identities = 199/300 (66%), Positives = 243/300 (81%), Gaps = 2/300 (0%)
 Frame = +3

Query: 48  IAAAADWAELTHECLINILSRLSLEDRWRATMRVCKAWHQACKD-PCLNSTLDLESHFDS 224
           + + A+W ELT ECLINILSRLS ED+WR ++ VCK+W  A K+ P L+S  +L+ +FD 
Sbjct: 3   VESEAEWGELTRECLINILSRLSFEDQWRGSLLVCKSWFNAFKEEPSLHSVFNLDPYFDK 62

Query: 225 AAELPRFWTPDFERRIDNMLGSVAVWAAGCLTEIRVRHCSDRSLSLVAKRCPNLQVLSIK 404
             E PR+WT  FE +ID+ML S+  W    LT+IR+RHCSDRSL+LVA+RCPNL+VLSI+
Sbjct: 63  PLESPRWWTLQFESQIDSMLRSIVQWTHIFLTQIRIRHCSDRSLALVAQRCPNLEVLSIR 122

Query: 405 SSPHVTDAVMAAIASGCPKIKELDVSYCYEISHSSLAIVGSHCP-VRVLKRNLMNWLDPS 581
           S P VTD  M+ IA+GCP ++ELD+SYCYEI+H SL ++G +C  ++VLKRNLMNWLDPS
Sbjct: 123 SCPRVTDDSMSKIATGCPNLRELDISYCYEITHESLVLIGRNCSNIKVLKRNLMNWLDPS 182

Query: 582 QHTGIVPNEYLNACPQDGDSEAAAISKLMSHLLHLELRFSKMTAKGLTLISQGCQDLEYV 761
           QH GIVP++YLNACPQDGDSEA AI+  M HL  LE+RFSK+TAKGL  I QGC +LE++
Sbjct: 183 QHVGIVPDDYLNACPQDGDSEAVAIANSMPHLEGLEIRFSKLTAKGLNSICQGCPNLEFL 242

Query: 762 DLSGCANVTSRDIANASSNLKKLKTIIKPNFYIPRSVFHTERYGHWRLYEERFQTDVFRI 941
           DLSGCAN+TSRDIA ASS+L  LK I KPNFYIPRSVFHTERYGHW LY+ERFQTDVFRI
Sbjct: 243 DLSGCANLTSRDIAKASSSLSHLKDIKKPNFYIPRSVFHTERYGHWSLYDERFQTDVFRI 302


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