BLASTX nr result

ID: Scutellaria23_contig00010846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00010846
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144648.1| PREDICTED: mediator of RNA polymerase II tra...   100   2e-19
gb|AFK33474.1| unknown [Lotus japonicus]                               97   2e-18
ref|XP_002882182.1| hypothetical protein ARALYDRAFT_317046 [Arab...    97   2e-18
ref|NP_974205.1| uncharacterized protein [Arabidopsis thaliana] ...    97   2e-18
ref|XP_003631040.1| hypothetical protein MTR_8g106500 [Medicago ...    96   3e-18

>ref|XP_004144648.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           11-like [Cucumis sativus]
           gi|449504225|ref|XP_004162288.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 11-like [Cucumis
           sativus]
          Length = 118

 Score =  100 bits (249), Expect = 2e-19
 Identities = 46/58 (79%), Positives = 53/58 (91%)
 Frame = -2

Query: 432 MDPQSQTTSLQRLQNVEKRIVRVLELAGGIMEEMANPSGPRKELVNSHCSEFMQLVKN 259
           MDP +  TSLQRLQNVEKRIVRVLELAGG+MEE+ANP+GPRKE VN+HCSEFMQ +K+
Sbjct: 1   MDPPAHNTSLQRLQNVEKRIVRVLELAGGVMEELANPAGPRKEFVNNHCSEFMQFIKD 58


>gb|AFK33474.1| unknown [Lotus japonicus]
          Length = 115

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 44/58 (75%), Positives = 54/58 (93%)
 Frame = -2

Query: 432 MDPQSQTTSLQRLQNVEKRIVRVLELAGGIMEEMANPSGPRKELVNSHCSEFMQLVKN 259
           MDPQ QTTSLQRLQNVEKRIV+VLELAGG+M+E+A+P GPRK++V +HC EFMQL+K+
Sbjct: 1   MDPQGQTTSLQRLQNVEKRIVKVLELAGGVMDELASPLGPRKDVVQNHCLEFMQLIKD 58


>ref|XP_002882182.1| hypothetical protein ARALYDRAFT_317046 [Arabidopsis lyrata subsp.
           lyrata] gi|297328022|gb|EFH58441.1| hypothetical protein
           ARALYDRAFT_317046 [Arabidopsis lyrata subsp. lyrata]
          Length = 115

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 44/58 (75%), Positives = 53/58 (91%)
 Frame = -2

Query: 432 MDPQSQTTSLQRLQNVEKRIVRVLELAGGIMEEMANPSGPRKELVNSHCSEFMQLVKN 259
           MDPQ+Q TSLQRLQNVE R+V+VLELAGG+MEE+A+PSGP+KE VNSHC EFMQ +K+
Sbjct: 1   MDPQTQNTSLQRLQNVENRVVKVLELAGGVMEELASPSGPKKEFVNSHCREFMQSMKD 58


>ref|NP_974205.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75123851|sp|Q6ID77.1|MED11_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           11 gi|48310228|gb|AAT41779.1| At3g01435 [Arabidopsis
           thaliana] gi|52218796|gb|AAU29468.1| At3g01435
           [Arabidopsis thaliana] gi|110738543|dbj|BAF01197.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332640145|gb|AEE73666.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 115

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 44/58 (75%), Positives = 53/58 (91%)
 Frame = -2

Query: 432 MDPQSQTTSLQRLQNVEKRIVRVLELAGGIMEEMANPSGPRKELVNSHCSEFMQLVKN 259
           MDPQ+Q TSLQRLQNVE R+V+VLELAGG+MEE+A+PSGP+KE VNSHC EFMQ +K+
Sbjct: 1   MDPQTQNTSLQRLQNVENRVVKVLELAGGVMEELASPSGPKKEFVNSHCREFMQSMKD 58


>ref|XP_003631040.1| hypothetical protein MTR_8g106500 [Medicago truncatula]
           gi|355525062|gb|AET05516.1| hypothetical protein
           MTR_8g106500 [Medicago truncatula]
          Length = 91

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 51/86 (59%), Positives = 66/86 (76%)
 Frame = -2

Query: 432 MDPQSQTTSLQRLQNVEKRIVRVLELAGGIMEEMANPSGPRKELVNSHCSEFMQLVKNDK 253
           MD Q QTTSLQRLQNVEKRIV+VLELAGG+M+E+A+P GPRK+LV +HC EFMQL+K   
Sbjct: 1   MDSQGQTTSLQRLQNVEKRIVKVLELAGGVMDELASPVGPRKDLVQNHCLEFMQLIKVIF 60

Query: 252 TMSDP*NRQVSLGKSFLTCLSTASIS 175
           T+S   +  ++    ++T  S+ SIS
Sbjct: 61  TLSLNNSLFITRLHWYITIDSSGSIS 86


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