BLASTX nr result

ID: Scutellaria23_contig00010708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00010708
         (922 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 ...   291   1e-76
emb|CBI15412.3| unnamed protein product [Vitis vinifera]              290   4e-76
ref|XP_002317931.1| predicted protein [Populus trichocarpa] gi|2...   276   5e-72
ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [...   275   1e-71
ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicu...   274   2e-71

>ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 [Vitis vinifera]
          Length = 902

 Score =  291 bits (746), Expect = 1e-76
 Identities = 142/193 (73%), Positives = 164/193 (84%), Gaps = 1/193 (0%)
 Frame = -3

Query: 920  GTSTYDGFGLAWAICEHIVEVIEAPTLFATHFHELTALAHETTSNEQSSKKLTGVANYHV 741
            GTSTYDGFGLAWAICEHIVEVI+APTLFATHFHELTALAHE T ++   K++ GVANYHV
Sbjct: 710  GTSTYDGFGLAWAICEHIVEVIKAPTLFATHFHELTALAHENTDHQPPEKQIVGVANYHV 769

Query: 740  SAHIDSSSRKLTMLYKVEPGACDQSFGIHVAEFAKFPESVIALAREKASELEDFSPVAIV 561
            SAHIDSSSRKLTMLYKVEPGACDQSFGIHVAEFA FPESV+ LAREKA+ELEDFSP  IV
Sbjct: 770  SAHIDSSSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFSPTEIV 829

Query: 560  PSD-PEKMGPKRKRVEDSDDVVKGTERARQFLKQFSKLPLDKLEFQQALEEVRKLKEDLV 384
             +D  +K+G KRKR    DD+ +G  RA QFLK+FS LPL+K++ ++AL++V KLK DL 
Sbjct: 830  SNDASDKVGSKRKRESSPDDISRGAARAHQFLKEFSDLPLEKMDLKEALQQVSKLKNDLE 889

Query: 383  KDAVHFSWLKQFF 345
            KDAV+  WL+QFF
Sbjct: 890  KDAVNCHWLQQFF 902


>emb|CBI15412.3| unnamed protein product [Vitis vinifera]
          Length = 945

 Score =  290 bits (741), Expect = 4e-76
 Identities = 142/196 (72%), Positives = 163/196 (83%), Gaps = 4/196 (2%)
 Frame = -3

Query: 920  GTSTYDGFGLAWAICEHIVEVIEAPTLFATHFHELTALAHETTSNEQSSKKLTGVANYHV 741
            GTSTYDGFGLAWAICEHIVEVI+APTLFATHFHELTALAHE T ++   K++ GVANYHV
Sbjct: 750  GTSTYDGFGLAWAICEHIVEVIKAPTLFATHFHELTALAHENTDHQPPEKQIVGVANYHV 809

Query: 740  SAHIDSSSRKLTMLYKVEPGACDQSFGIHVAEFAKFPESVIALAREKASELEDFSPVAIV 561
            SAHIDSSSRKLTMLYKVEPGACDQSFGIHVAEFA FPESV+ LAREKA+ELEDFSP  IV
Sbjct: 810  SAHIDSSSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFSPTEIV 869

Query: 560  PSDPE----KMGPKRKRVEDSDDVVKGTERARQFLKQFSKLPLDKLEFQQALEEVRKLKE 393
             +D      K+G KRKR    DD+ +G  RA QFLK+FS LPL+K++ ++AL++V KLK 
Sbjct: 870  SNDASDKGLKVGSKRKRESSPDDISRGAARAHQFLKEFSDLPLEKMDLKEALQQVSKLKN 929

Query: 392  DLVKDAVHFSWLKQFF 345
            DL KDAV+  WL+QFF
Sbjct: 930  DLEKDAVNCHWLQQFF 945


>ref|XP_002317931.1| predicted protein [Populus trichocarpa] gi|222858604|gb|EEE96151.1|
            predicted protein [Populus trichocarpa]
          Length = 944

 Score =  276 bits (706), Expect = 5e-72
 Identities = 135/193 (69%), Positives = 159/193 (82%), Gaps = 1/193 (0%)
 Frame = -3

Query: 920  GTSTYDGFGLAWAICEHIVEVIEAPTLFATHFHELTALAHETTSNEQSSKKLTGVANYHV 741
            GTSTYDGFGLAWAICEH+V  ++APTLFATHFHELTALAH+    E  +K++ GVANYHV
Sbjct: 752  GTSTYDGFGLAWAICEHLVRELKAPTLFATHFHELTALAHQKPDQEPHAKQIVGVANYHV 811

Query: 740  SAHIDSSSRKLTMLYKVEPGACDQSFGIHVAEFAKFPESVIALAREKASELEDFSPVAIV 561
            SAHIDSS+ KLTMLYKVEPGACDQSFGIHVAEFA FPESV+ LAREKA+ELEDFSP AI+
Sbjct: 812  SAHIDSSNHKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFSPTAII 871

Query: 560  PSDP-EKMGPKRKRVEDSDDVVKGTERARQFLKQFSKLPLDKLEFQQALEEVRKLKEDLV 384
              D  E++G KRKR  + DD+ KG  RA +FLK FS LPLD ++ +QAL ++ KLK+DL 
Sbjct: 872  SDDAREEVGSKRKRECNMDDMSKGAARAHRFLKDFSDLPLDTMDLKQALLQIGKLKDDLE 931

Query: 383  KDAVHFSWLKQFF 345
            KDAV+  WL+QFF
Sbjct: 932  KDAVNCHWLQQFF 944


>ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [Ricinus communis]
            gi|223549157|gb|EEF50646.1| DNA mismatch repair protein
            MSH2, putative [Ricinus communis]
          Length = 936

 Score =  275 bits (703), Expect = 1e-71
 Identities = 139/193 (72%), Positives = 160/193 (82%), Gaps = 1/193 (0%)
 Frame = -3

Query: 920  GTSTYDGFGLAWAICEHIVEVIEAPTLFATHFHELTALAHETTSNEQSSKKLTGVANYHV 741
            GTSTYDGFGLAWAICEH+V+VI+APTLFATHFHELT LA E    E   K++ GVANYHV
Sbjct: 746  GTSTYDGFGLAWAICEHLVQVIKAPTLFATHFHELTGLADEKA--EPHMKQIAGVANYHV 803

Query: 740  SAHIDSSSRKLTMLYKVEPGACDQSFGIHVAEFAKFPESVIALAREKASELEDFSPVAIV 561
            SAHIDSS+RKLTMLYKVEPGACDQSFGIHVAEFA FPESV+ALAREKA+ELEDFSP AIV
Sbjct: 804  SAHIDSSNRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVALAREKAAELEDFSPNAIV 863

Query: 560  PSD-PEKMGPKRKRVEDSDDVVKGTERARQFLKQFSKLPLDKLEFQQALEEVRKLKEDLV 384
             +D  EK+G KR R  D DDV +G  RA +FLK+FS LPL+ ++ ++AL++V KLKE L 
Sbjct: 864  SNDTTEKVGSKRNRKCDPDDVSRGAARAHKFLKEFSDLPLETMDLKEALQQVSKLKEGLE 923

Query: 383  KDAVHFSWLKQFF 345
            KDA +  WLKQFF
Sbjct: 924  KDAANCQWLKQFF 936


>ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicum]
            gi|296034481|gb|ADG85112.1| mismatch repair protein
            [Solanum lycopersicum]
          Length = 943

 Score =  274 bits (701), Expect = 2e-71
 Identities = 135/192 (70%), Positives = 165/192 (85%)
 Frame = -3

Query: 920  GTSTYDGFGLAWAICEHIVEVIEAPTLFATHFHELTALAHETTSNEQSSKKLTGVANYHV 741
            GTSTYDGFGLAWAICEHIVE I+APTLFATHFHELTALA+E  +N    K+++ VAN+HV
Sbjct: 750  GTSTYDGFGLAWAICEHIVEEIKAPTLFATHFHELTALANENGNN--GHKQISSVANFHV 807

Query: 740  SAHIDSSSRKLTMLYKVEPGACDQSFGIHVAEFAKFPESVIALAREKASELEDFSPVAIV 561
            SAHIDSSSRKLTMLYKV+PGACDQSFGIHVAEFA FP+SV+ALAREKASELEDFSP A++
Sbjct: 808  SAHIDSSSRKLTMLYKVQPGACDQSFGIHVAEFANFPQSVVALAREKASELEDFSPRAMM 867

Query: 560  PSDPEKMGPKRKRVEDSDDVVKGTERARQFLKQFSKLPLDKLEFQQALEEVRKLKEDLVK 381
            P+D +++  KRKR  D  DV +GT RARQFL+ F++LPLDK++ +QAL+++ ++K DL K
Sbjct: 868  PNDCKEVVSKRKREFDPHDVSRGTARARQFLQDFTQLPLDKMDLKQALQQLSQMKTDLEK 927

Query: 380  DAVHFSWLKQFF 345
            +AV   WL+QFF
Sbjct: 928  NAVDSQWLQQFF 939


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