BLASTX nr result

ID: Scutellaria23_contig00010639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00010639
         (1059 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524303.1| polypyrimidine tract binding protein, putati...   375   e-101
ref|XP_002264763.2| PREDICTED: polypyrimidine tract-binding prot...   371   e-100
ref|XP_002264689.2| PREDICTED: polypyrimidine tract-binding prot...   371   e-100
emb|CBI18226.3| unnamed protein product [Vitis vinifera]              371   e-100
ref|XP_002893943.1| predicted protein [Arabidopsis lyrata subsp....   367   3e-99

>ref|XP_002524303.1| polypyrimidine tract binding protein, putative [Ricinus communis]
           gi|223536394|gb|EEF38043.1| polypyrimidine tract binding
           protein, putative [Ricinus communis]
          Length = 437

 Score =  375 bits (963), Expect = e-101
 Identities = 181/199 (90%), Positives = 191/199 (95%)
 Frame = +3

Query: 45  LPPGISGTNDRCTVLVSNLNSDRIDEDKLFNLFSIYGNIIRIKLLRNKPDHALVQMGDGF 224
           LPPGISGTNDRCTVLVSNLN D+IDEDKLFNLFS+YGNI+RIKLLRNKPDHALVQMGDGF
Sbjct: 235 LPPGISGTNDRCTVLVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRNKPDHALVQMGDGF 294

Query: 225 QAELAVHFLKGAILFGKRLEVNFSKHPNITTGADTHEYSNSNLNRFNRNAAKNYRYCCSP 404
           QAELAVHFLKGA+LFGKRLEVNFSKHPNIT GADTHEY NSNLNRFNRNAAKNYRYCCSP
Sbjct: 295 QAELAVHFLKGAVLFGKRLEVNFSKHPNITQGADTHEYVNSNLNRFNRNAAKNYRYCCSP 354

Query: 405 TKMIHISTLPQDVTEEEITSHLEEHGTIISTKLFEMNGKKQALVLFENEEQATEALVCKH 584
           TKMIH+STLPQD+TEEEI SHLEEHGTI++TKLFEMNGKKQALVLFE EEQATEALVCKH
Sbjct: 355 TKMIHLSTLPQDITEEEIVSHLEEHGTIVNTKLFEMNGKKQALVLFETEEQATEALVCKH 414

Query: 585 ATSLGGSTIRISFSQLQTI 641
           A S+ GS IRISFSQLQ+I
Sbjct: 415 AISVAGSIIRISFSQLQSI 433


>ref|XP_002264763.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 2
           [Vitis vinifera]
          Length = 432

 Score =  371 bits (952), Expect = e-100
 Identities = 181/199 (90%), Positives = 190/199 (95%)
 Frame = +3

Query: 45  LPPGISGTNDRCTVLVSNLNSDRIDEDKLFNLFSIYGNIIRIKLLRNKPDHALVQMGDGF 224
           LPPGISGTNDRCTVLVSNLN DRIDEDKLFNLFSIYGNI+RIKLLRNKPDHALVQMGDGF
Sbjct: 234 LPPGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGF 293

Query: 225 QAELAVHFLKGAILFGKRLEVNFSKHPNITTGADTHEYSNSNLNRFNRNAAKNYRYCCSP 404
           QAELAVHFLKGA+LFGKRLEVNFSK+ NITTGADTHEY NS+LNRFNRNAAKNYRYCCSP
Sbjct: 294 QAELAVHFLKGAMLFGKRLEVNFSKYSNITTGADTHEYMNSSLNRFNRNAAKNYRYCCSP 353

Query: 405 TKMIHISTLPQDVTEEEITSHLEEHGTIISTKLFEMNGKKQALVLFENEEQATEALVCKH 584
           TKMIH+STL QD+TEEEI SHLEEHGTI++TKLFEMNGKKQALV+FENEEQATEALVCKH
Sbjct: 354 TKMIHVSTLNQDITEEEIVSHLEEHGTIVNTKLFEMNGKKQALVMFENEEQATEALVCKH 413

Query: 585 ATSLGGSTIRISFSQLQTI 641
           AT LGG  IRISFSQLQ I
Sbjct: 414 ATPLGGLAIRISFSQLQGI 432


>ref|XP_002264689.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 1
           [Vitis vinifera]
          Length = 445

 Score =  371 bits (952), Expect = e-100
 Identities = 181/199 (90%), Positives = 190/199 (95%)
 Frame = +3

Query: 45  LPPGISGTNDRCTVLVSNLNSDRIDEDKLFNLFSIYGNIIRIKLLRNKPDHALVQMGDGF 224
           LPPGISGTNDRCTVLVSNLN DRIDEDKLFNLFSIYGNI+RIKLLRNKPDHALVQMGDGF
Sbjct: 247 LPPGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGF 306

Query: 225 QAELAVHFLKGAILFGKRLEVNFSKHPNITTGADTHEYSNSNLNRFNRNAAKNYRYCCSP 404
           QAELAVHFLKGA+LFGKRLEVNFSK+ NITTGADTHEY NS+LNRFNRNAAKNYRYCCSP
Sbjct: 307 QAELAVHFLKGAMLFGKRLEVNFSKYSNITTGADTHEYMNSSLNRFNRNAAKNYRYCCSP 366

Query: 405 TKMIHISTLPQDVTEEEITSHLEEHGTIISTKLFEMNGKKQALVLFENEEQATEALVCKH 584
           TKMIH+STL QD+TEEEI SHLEEHGTI++TKLFEMNGKKQALV+FENEEQATEALVCKH
Sbjct: 367 TKMIHVSTLNQDITEEEIVSHLEEHGTIVNTKLFEMNGKKQALVMFENEEQATEALVCKH 426

Query: 585 ATSLGGSTIRISFSQLQTI 641
           AT LGG  IRISFSQLQ I
Sbjct: 427 ATPLGGLAIRISFSQLQGI 445


>emb|CBI18226.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score =  371 bits (952), Expect = e-100
 Identities = 181/199 (90%), Positives = 190/199 (95%)
 Frame = +3

Query: 45  LPPGISGTNDRCTVLVSNLNSDRIDEDKLFNLFSIYGNIIRIKLLRNKPDHALVQMGDGF 224
           LPPGISGTNDRCTVLVSNLN DRIDEDKLFNLFSIYGNI+RIKLLRNKPDHALVQMGDGF
Sbjct: 245 LPPGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGF 304

Query: 225 QAELAVHFLKGAILFGKRLEVNFSKHPNITTGADTHEYSNSNLNRFNRNAAKNYRYCCSP 404
           QAELAVHFLKGA+LFGKRLEVNFSK+ NITTGADTHEY NS+LNRFNRNAAKNYRYCCSP
Sbjct: 305 QAELAVHFLKGAMLFGKRLEVNFSKYSNITTGADTHEYMNSSLNRFNRNAAKNYRYCCSP 364

Query: 405 TKMIHISTLPQDVTEEEITSHLEEHGTIISTKLFEMNGKKQALVLFENEEQATEALVCKH 584
           TKMIH+STL QD+TEEEI SHLEEHGTI++TKLFEMNGKKQALV+FENEEQATEALVCKH
Sbjct: 365 TKMIHVSTLNQDITEEEIVSHLEEHGTIVNTKLFEMNGKKQALVMFENEEQATEALVCKH 424

Query: 585 ATSLGGSTIRISFSQLQTI 641
           AT LGG  IRISFSQLQ I
Sbjct: 425 ATPLGGLAIRISFSQLQGI 443


>ref|XP_002893943.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297339785|gb|EFH70202.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 432

 Score =  367 bits (941), Expect = 3e-99
 Identities = 174/199 (87%), Positives = 190/199 (95%)
 Frame = +3

Query: 45  LPPGISGTNDRCTVLVSNLNSDRIDEDKLFNLFSIYGNIIRIKLLRNKPDHALVQMGDGF 224
           LPPGI+GTNDRCTVLVSNLN+D IDEDKLFNLFS+YGNI+RIKLLRNKPDHALVQMGDGF
Sbjct: 234 LPPGITGTNDRCTVLVSNLNADSIDEDKLFNLFSLYGNIVRIKLLRNKPDHALVQMGDGF 293

Query: 225 QAELAVHFLKGAILFGKRLEVNFSKHPNITTGADTHEYSNSNLNRFNRNAAKNYRYCCSP 404
           QAELAVHFLKGA+LFGKRLEVNFSKHPNIT G D+H+Y NSNLNRFNRNAAKNYRYCCSP
Sbjct: 294 QAELAVHFLKGAVLFGKRLEVNFSKHPNITPGTDSHDYVNSNLNRFNRNAAKNYRYCCSP 353

Query: 405 TKMIHISTLPQDVTEEEITSHLEEHGTIISTKLFEMNGKKQALVLFENEEQATEALVCKH 584
           TKMIH+STLPQDVTEEE+ +H++EHG I++TK+FEMNGKKQALV FENEE+A EALVCKH
Sbjct: 354 TKMIHLSTLPQDVTEEEVMNHVQEHGAIVNTKVFEMNGKKQALVQFENEEEAAEALVCKH 413

Query: 585 ATSLGGSTIRISFSQLQTI 641
           ATSLGGS IRISFSQLQTI
Sbjct: 414 ATSLGGSIIRISFSQLQTI 432


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