BLASTX nr result

ID: Scutellaria23_contig00009425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00009425
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282052.1| PREDICTED: WD repeat-containing protein 44-l...    82   1e-13
ref|XP_004141232.1| PREDICTED: WD repeat-containing protein 44-l...    81   2e-13
emb|CBI20340.3| unnamed protein product [Vitis vinifera]               77   3e-12
ref|NP_566515.1| transducin/WD40 domain-containing protein [Arab...    71   1e-10
ref|XP_002885089.1| WD-40 repeat family protein [Arabidopsis lyr...    69   9e-10

>ref|XP_002282052.1| PREDICTED: WD repeat-containing protein 44-like [Vitis vinifera]
          Length = 880

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 54/150 (36%), Positives = 81/150 (54%), Gaps = 19/150 (12%)
 Frame = -2

Query: 616 NTSCSCSPYASDPEEDCDPNTNSNDS------LPKFPVCVSQNYDVWMSQPSSVEERRIR 455
           ++SCSCS  +S+ ++D DPN + N +      +PKFP+  S+ YD+W+S+PSS+EERR R
Sbjct: 23  SSSCSCS--SSNSDDDADPNASPNYASEHPFPIPKFPIGASK-YDIWISEPSSIEERRSR 79

Query: 454 LLCQMGLARDPSILRHRPS-------LSLSISSNTFDSLGETSCCDTLNSIDNTSDYVNA 296
           LL +MGL+ DPS+ R +P+       +  S+SS+     GE       +  D   D  N+
Sbjct: 80  LLREMGLSNDPSLSRVKPTADRSNGDIGRSVSSDRLAGQGEAGVVICRSKSDGAKDQCNS 139

Query: 295 ------YDSCNSNYGASLMVRSKSDGDCNS 224
                   S  S    S +V S+S G   S
Sbjct: 140 SVCSPPILSICSVVNNSKLVNSRSSGSNGS 169


>ref|XP_004141232.1| PREDICTED: WD repeat-containing protein 44-like [Cucumis sativus]
           gi|449498657|ref|XP_004160597.1| PREDICTED: WD
           repeat-containing protein 44-like [Cucumis sativus]
          Length = 918

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 58/161 (36%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
 Frame = -2

Query: 613 TSCSCSPYASDPEEDCDPNTNSNDS-----LPKFPVCVSQNYDVWMSQPSSVEERRIRLL 449
           +S SCS   SD + D   N+ + DS     +PKFP+ VS NYD+W+S+P+SV ERR RLL
Sbjct: 24  SSGSCSTSNSDDDRDSIVNSPNYDSEHPFPIPKFPMAVS-NYDIWISEPASVLERRSRLL 82

Query: 448 CQMGLARDPSILRHRPSLSLSISSNTFDSLGETSCCDTLNSIDNTSDYVNAYDSCNSNYG 269
            +MGL+ DPS+ R   +L L          G +   D L S                   
Sbjct: 83  REMGLSGDPSLSRANTALELDHKEKGVGDFGRSVSSDYLTS---------------QQQQ 127

Query: 268 ASLMVRSKSDG--DCNSHKSSEGYSNNSETGGNDNESDIQS 152
              ++RSKSDG  DCN + SS   S +      +  S I S
Sbjct: 128 PPAIIRSKSDGSADCNRNMSSSQASGSDTNNQCNYSSSISS 168


>emb|CBI20340.3| unnamed protein product [Vitis vinifera]
          Length = 749

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 39/83 (46%), Positives = 59/83 (71%), Gaps = 6/83 (7%)
 Frame = -2

Query: 616 NTSCSCSPYASDPEEDCDPNTNSNDS------LPKFPVCVSQNYDVWMSQPSSVEERRIR 455
           ++SCSCS  +S+ ++D DPN + N +      +PKFP+  S+ YD+W+S+PSS+EERR R
Sbjct: 23  SSSCSCS--SSNSDDDADPNASPNYASEHPFPIPKFPIGASK-YDIWISEPSSIEERRSR 79

Query: 454 LLCQMGLARDPSILRHRPSLSLS 386
           LL +MGL+ DPS+ R +P+   S
Sbjct: 80  LLREMGLSNDPSLSRVKPTADRS 102


>ref|NP_566515.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|13937211|gb|AAK50098.1|AF372960_1 AT3g15470/MJK13_13
           [Arabidopsis thaliana] gi|7021732|gb|AAF35413.1| unknown
           protein [Arabidopsis thaliana]
           gi|15795112|dbj|BAB02376.1| WD-40 repeat protein-like
           [Arabidopsis thaliana] gi|19548013|gb|AAL87370.1|
           AT3g15470/MJK13_13 [Arabidopsis thaliana]
           gi|332642159|gb|AEE75680.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 883

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 51/148 (34%), Positives = 77/148 (52%), Gaps = 20/148 (13%)
 Frame = -2

Query: 622 SSNTSCSCSPYASDPEEDCDPNTNSNDS------------------LPKFPVCVSQNYDV 497
           +S++SCSCS   SD + +  P  +S  S                  +P+FP+  S+ +DV
Sbjct: 26  ASSSSCSCSASNSDYDSESSPRISSAASHDSEELYGGGRRRRYPFPVPRFPMGASK-FDV 84

Query: 496 WMSQPSSVEERRIRLLCQMGLARDPSILRHRPSLSLSISSNTFDSLGETSCCDTLNSIDN 317
           W S+P+SV ERR +LL +MGL+RDP + R +P    S S +T  +  E S   + N +  
Sbjct: 85  WTSEPASVSERRSKLLNEMGLSRDPVLSRLKPVSDSSSSKDTGAAGFEISRSISCNQLAR 144

Query: 316 TSDYVNAYDSCNSNYG--ASLMVRSKSD 239
                  +  C+ + G  AS +VRSKSD
Sbjct: 145 RD-----HGECSESVGGCASCIVRSKSD 167


>ref|XP_002885089.1| WD-40 repeat family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330929|gb|EFH61348.1| WD-40 repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 885

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 52/148 (35%), Positives = 76/148 (51%), Gaps = 20/148 (13%)
 Frame = -2

Query: 622 SSNTSCSCSPYASDPEEDCDPNTNSNDS------------------LPKFPVCVSQNYDV 497
           +S++SCSCS   SD + +  P  +S  S                  +P+FP+  S+ +DV
Sbjct: 25  ASSSSCSCSASNSDYDSESSPRISSAASHDSEEHNGGGRRRRYPFPVPRFPMGASK-FDV 83

Query: 496 WMSQPSSVEERRIRLLCQMGLARDPSILRHRPSLSLSISSNTFDSLGETSCCDTLNSIDN 317
           W+S+P+SV ERR +LL +MGL+RDP + R +P   +S SS+     G +   D   SI  
Sbjct: 84  WISEPASVSERRSKLLNEMGLSRDPVLSRLKP---VSDSSSKETGAGSS---DISRSISC 137

Query: 316 TSDYVNAYDSCNSNYG--ASLMVRSKSD 239
                  +  C    G  AS +VRSKSD
Sbjct: 138 NQLARRDHGECFETVGGCASCIVRSKSD 165


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