BLASTX nr result

ID: Scutellaria23_contig00009398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00009398
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28
ref|XP_002303044.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27
ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26
ref|XP_004139628.1| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26
ref|XP_002863920.1| pentatricopeptide repeat-containing protein ...   124   1e-26

>ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
           chloroplastic-like [Vitis vinifera]
           gi|297744374|emb|CBI37344.3| unnamed protein product
           [Vitis vinifera]
          Length = 497

 Score =  129 bits (325), Expect = 2e-28
 Identities = 77/138 (55%), Positives = 87/138 (63%), Gaps = 10/138 (7%)
 Frame = +3

Query: 78  MASLGGPTSPFRPSFDRRDRTRSNT---RPELQPSNVSERQLDLXXXXXXXXXXXXXXXT 248
           M SL  P+ P   +F+RR  +   T   +P   PS                         
Sbjct: 1   MTSLSSPSPPLPQAFNRRPASAPETVRSKPSSSPSPTETTSAGRNRRTGVVKEKEREERE 60

Query: 249 NR-----KIASQKAISIILRREATKAVIEKKKG--NSKKLLPRTVLEALHERITALRWES 407
            R     KIAS+KAIS+ILRREATKAVIEKK+G  NSKKLLPRTVLEALHERITALRWES
Sbjct: 61  RREEVALKIASKKAISVILRREATKAVIEKKRGPNNSKKLLPRTVLEALHERITALRWES 120

Query: 408 ALKVFELLREQLWYKPNT 461
           ALKVFELLREQLWY+PN+
Sbjct: 121 ALKVFELLREQLWYRPNS 138


>ref|XP_002303044.1| predicted protein [Populus trichocarpa] gi|222844770|gb|EEE82317.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score =  125 bits (314), Expect = 4e-27
 Identities = 77/138 (55%), Positives = 92/138 (66%), Gaps = 12/138 (8%)
 Frame = +3

Query: 78  MASLGGPTSPFRPSFDRRDRTRSN------TRPELQP----SNVSERQLDLXXXXXXXXX 227
           MASL   T+ F+ SF+ + +T+S       +RPE +     S+ +               
Sbjct: 1   MASLSPSTNLFQQSFNWKLQTKSKVTPSCASRPETKSNFASSSANNNVAIEWEKLKKKEE 60

Query: 228 XXXXXXTNRKIASQKAISIILRREATKAVIEKKKG--NSKKLLPRTVLEALHERITALRW 401
                  NRKIASQKAIS+ILRREATKAVIEKK+G  NSKKLLP+TVLEALHERITALRW
Sbjct: 61  KERKEEVNRKIASQKAISVILRREATKAVIEKKRGPTNSKKLLPQTVLEALHERITALRW 120

Query: 402 ESALKVFELLREQLWYKP 455
            SAL+VFELLREQLWY+P
Sbjct: 121 ASALEVFELLREQLWYRP 138


>ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
           chloroplastic-like [Cucumis sativus]
          Length = 511

 Score =  124 bits (310), Expect = 1e-26
 Identities = 63/71 (88%), Positives = 68/71 (95%), Gaps = 2/71 (2%)
 Frame = +3

Query: 249 NRKIASQKAISIILRREATKAVIEKKKG--NSKKLLPRTVLEALHERITALRWESALKVF 422
           NRKIASQKAIS+ILRREATKAVIE+K+G  NSKKLLPRTVLEALH+RIT LRWESALKVF
Sbjct: 83  NRKIASQKAISVILRREATKAVIERKRGPNNSKKLLPRTVLEALHDRITTLRWESALKVF 142

Query: 423 ELLREQLWYKP 455
           ELLREQLWY+P
Sbjct: 143 ELLREQLWYRP 153


>ref|XP_004139628.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
           chloroplastic-like [Cucumis sativus]
          Length = 456

 Score =  124 bits (310), Expect = 1e-26
 Identities = 63/71 (88%), Positives = 68/71 (95%), Gaps = 2/71 (2%)
 Frame = +3

Query: 249 NRKIASQKAISIILRREATKAVIEKKKG--NSKKLLPRTVLEALHERITALRWESALKVF 422
           NRKIASQKAIS+ILRREATKAVIE+K+G  NSKKLLPRTVLEALH+RIT LRWESALKVF
Sbjct: 28  NRKIASQKAISVILRREATKAVIERKRGPNNSKKLLPRTVLEALHDRITTLRWESALKVF 87

Query: 423 ELLREQLWYKP 455
           ELLREQLWY+P
Sbjct: 88  ELLREQLWYRP 98


>ref|XP_002863920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297309755|gb|EFH40179.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 498

 Score =  124 bits (310), Expect = 1e-26
 Identities = 64/71 (90%), Positives = 68/71 (95%)
 Frame = +3

Query: 246 TNRKIASQKAISIILRREATKAVIEKKKGNSKKLLPRTVLEALHERITALRWESALKVFE 425
           TN KIAS+KAISIILRREATK +IEKKKG SKKLLPRTVLE+LHERITALRWESAL+VFE
Sbjct: 83  TNTKIASRKAISIILRREATKEIIEKKKG-SKKLLPRTVLESLHERITALRWESALQVFE 141

Query: 426 LLREQLWYKPN 458
           LLREQLWYKPN
Sbjct: 142 LLREQLWYKPN 152


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