BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00008852
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605589.1| Cytochrome b559 subunit alpha [Medicago trun...   190   1e-61
prf||1011228A cytochrome b559                                         170   2e-57
ref|XP_002888378.1| hypothetical protein ARALYDRAFT_894035 [Arab...   162   8e-55
ref|XP_003606015.1| Cytochrome b559 subunit alpha [Medicago trun...   168   2e-54
pir||T14570 cytochrome b559 component psbE - beet chloroplast gi...   192   8e-47

>ref|XP_003605589.1| Cytochrome b559 subunit alpha [Medicago truncatula]
           gi|355506644|gb|AES87786.1| Cytochrome b559 subunit
           alpha [Medicago truncatula]
          Length = 153

 Score =  190 bits (482), Expect(2) = 1e-61
 Identities = 99/132 (75%), Positives = 102/132 (77%), Gaps = 1/132 (0%)
 Frame = +2

Query: 224 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 403
           MSGSTGERSFADIITSIRYW+IHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR
Sbjct: 1   MSGSTGERSFADIITSIRYWIIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 60

Query: 404 QGIPLITGRFDSLEQLDEFSRSF*EALIK*L*IEPIQFLQYDGWLFTA*LYLPS-FFWGQ 580
           QGIPLITGRFDSLEQLDEF R                      WL    L +P+ FFW Q
Sbjct: 61  QGIPLITGRFDSLEQLDEFIR----------------------WLAVHGLAVPTVFFWDQ 98

Query: 581 YQQCSSSNDKPN 616
           YQQCSSSNDKPN
Sbjct: 99  YQQCSSSNDKPN 110



 Score = 73.2 bits (178), Expect(2) = 1e-61
 Identities = 34/34 (100%), Positives = 34/34 (100%)
 Frame = +3

Query: 618 PNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLA 719
           PNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLA
Sbjct: 111 PNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLA 144


>prf||1011228A cytochrome b559
          Length = 122

 Score =  170 bits (431), Expect(2) = 2e-57
 Identities = 83/83 (100%), Positives = 83/83 (100%)
 Frame = +2

Query: 224 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 403
           MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR
Sbjct: 1   MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 60

Query: 404 QGIPLITGRFDSLEQLDEFSRSF 472
           QGIPLITGRFDSLEQLDEFSRSF
Sbjct: 61  QGIPLITGRFDSLEQLDEFSRSF 83



 Score = 78.6 bits (192), Expect(2) = 2e-57
 Identities = 37/39 (94%), Positives = 38/39 (97%)
 Frame = +1

Query: 490 MTIDRTYPIFTVRWLAVHGLAVPTVFFLGSISAMQFIQR 606
           MTIDRTYPIFTVRWLA+HGLAVPTV FLGSISAMQFIQR
Sbjct: 84  MTIDRTYPIFTVRWLAIHGLAVPTVSFLGSISAMQFIQR 122


>ref|XP_002888378.1| hypothetical protein ARALYDRAFT_894035 [Arabidopsis lyrata subsp.
           lyrata] gi|297334219|gb|EFH64637.1| hypothetical protein
           ARALYDRAFT_894035 [Arabidopsis lyrata subsp. lyrata]
          Length = 136

 Score =  162 bits (411), Expect(3) = 8e-55
 Identities = 79/81 (97%), Positives = 79/81 (97%)
 Frame = +2

Query: 224 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 403
           MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR
Sbjct: 1   MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 60

Query: 404 QGIPLITGRFDSLEQLDEFSR 466
           QGIPLITGRFD LEQLDEF R
Sbjct: 61  QGIPLITGRFDPLEQLDEFMR 81



 Score = 60.1 bits (144), Expect(3) = 8e-55
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +3

Query: 630 AMTQSNPNEQNVELNRTSLYWGLLLIFVLA 719
           AMTQSNPNEQ+VELNRTSLYWGLL IFVLA
Sbjct: 98  AMTQSNPNEQSVELNRTSLYWGLLFIFVLA 127



 Score = 38.5 bits (88), Expect(3) = 8e-55
 Identities = 16/21 (76%), Positives = 20/21 (95%)
 Frame = +1

Query: 523 VRWLAVHGLAVPTVFFLGSIS 585
           +RWLAVHGLAVPTV FLG+++
Sbjct: 80  MRWLAVHGLAVPTVSFLGAMT 100


>ref|XP_003606015.1| Cytochrome b559 subunit alpha [Medicago truncatula]
           gi|355507070|gb|AES88212.1| Cytochrome b559 subunit
           alpha [Medicago truncatula]
          Length = 136

 Score =  168 bits (425), Expect(2) = 2e-54
 Identities = 91/131 (69%), Positives = 92/131 (70%)
 Frame = +2

Query: 224 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 403
           MSGSTGERSFADIITSIRYW+IHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR
Sbjct: 1   MSGSTGERSFADIITSIRYWIIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 60

Query: 404 QGIPLITGRFDSLEQLDEFSRSF*EALIK*L*IEPIQFLQYDGWLFTA*LYLPSFFWGQY 583
           QGIPLITGRFDSLEQLDEF R                      WL               
Sbjct: 61  QGIPLITGRFDSLEQLDEFIR----------------------WL--------------- 83

Query: 584 QQCSSSNDKPN 616
            QCSSSNDKPN
Sbjct: 84  -QCSSSNDKPN 93



 Score = 70.9 bits (172), Expect(2) = 2e-54
 Identities = 33/34 (97%), Positives = 33/34 (97%)
 Frame = +3

Query: 618 PNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLA 719
           PNYRA TQSNPNEQNVELNRTSLYWGLLLIFVLA
Sbjct: 94  PNYRATTQSNPNEQNVELNRTSLYWGLLLIFVLA 127


>pir||T14570 cytochrome b559 component psbE - beet chloroplast
           gi|860891|emb|CAA60967.1| PSII cytochome b559 alpha
           chain [Beta vulgaris subsp. vulgaris]
           gi|860897|emb|CAA60972.1| PSII cytochrome b599 alpha
           chain [Beta vulgaris subsp. vulgaris]
          Length = 118

 Score =  192 bits (487), Expect = 8e-47
 Identities = 99/116 (85%), Positives = 103/116 (88%), Gaps = 4/116 (3%)
 Frame = +2

Query: 137 DPISVIAFY*SHLLWNRS----PLTVQEYVELSMSGSTGERSFADIITSIRYWVIHSITI 304
           +P  ++ FY +  L   S    PLTVQEYVELSMSGSTGERSFADIITSIRYWVIHSITI
Sbjct: 3   NPTRILRFYVNGNLLISSFTDLPLTVQEYVELSMSGSTGERSFADIITSIRYWVIHSITI 62

Query: 305 PSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF 472
           PSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
Sbjct: 63  PSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF 118