BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00008540
         (3973 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR08426.1| phytochrome A [Orobanche minor]                       1818   0.0  
gb|ABA46868.1| phytochrome A [Solanum tuberosum]                     1807   0.0  
sp|P30733.2|PHYA_SOLTU RecName: Full=Phytochrome A gi|7550158|gb...  1801   0.0  
ref|NP_001234490.1| alternative transcript type 3 [Solanum lycop...  1801   0.0  
sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1 gi|297478|e...  1799   0.0  

>gb|AAR08426.1| phytochrome A [Orobanche minor]
          Length = 1123

 Score = 1818 bits (4708), Expect = 0.0
 Identities = 901/1119 (80%), Positives = 999/1119 (89%), Gaps = 5/1119 (0%)
 Frame = +2

Query: 362  SKQPGQSSINSARSRHSARVVAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNVD---QRPK 532
            S QPG+SS NSA+SR SAR++AQTSIDAKL A              VRVTN       P+
Sbjct: 3    SSQPGRSSTNSAQSRQSARIIAQTSIDAKLDADFEESGSSFDYSTSVRVTNYPAGLSEPR 62

Query: 533  PDKVTTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEHPV 712
             DKVTT YLHQIQKGK IQ FGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVG+HP+
Sbjct: 63   SDKVTTAYLHQIQKGKLIQQFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHPL 122

Query: 713  LGIGSDIRNVFTAPSAAALHKALGFGEVSLLNPVLVHCKTSGKPFYAIIHRVTGSLIIDF 892
            LGIGSDIR +FTAPSAAAL KALGFGEVSLLNP+LVHCKTSGKPFYAIIHRVTGSLIIDF
Sbjct: 123  LGIGSDIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDF 182

Query: 893  EPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMVQEVFELTGYDRVMIY 1072
            EPVKPHEVPMTAAGALQSYKLAAKAI  LQ+LP GSIERLCDTMVQ+VFELTGYDRVMIY
Sbjct: 183  EPVKPHEVPMTAAGALQSYKLAAKAIACLQALPGGSIERLCDTMVQQVFELTGYDRVMIY 242

Query: 1073 KFHDDDHGEVLTEVTKPGLEPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 1252
            KFH+DDHGEV TE+TKPGLEPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ
Sbjct: 243  KFHEDDHGEVFTEITKPGLEPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 302

Query: 1253 DENLPIELTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEGSDSTH-PERRKR 1429
            D+NLP +LTLCGSTLRAPH CH QYMENMNSIASLVMSVVVNEGDE+G DS+  P +RKR
Sbjct: 303  DDNLPFDLTLCGSTLRAPHGCHSQYMENMNSIASLVMSVVVNEGDEDGPDSSSGPYKRKR 362

Query: 1430 LWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDML 1609
            LWGLVVCH+T PRF+PFPLRYACEFL QVF+IHVNKELELENQMLEKNILRTQTLLCD+L
Sbjct: 363  LWGLVVCHNTCPRFIPFPLRYACEFLVQVFSIHVNKELELENQMLEKNILRTQTLLCDLL 422

Query: 1610 LRDAPLGIVSQSPNVMDLVKCDGAVLIYKNKKYRLGITPNDFQVRDIVSWLDEYHRDSTG 1789
            LRD PLGIVSQSPNVMDLVKCDGA+L++K  KYRLG+TP DFQ+RDIVSWLDEYH+DSTG
Sbjct: 423  LRDVPLGIVSQSPNVMDLVKCDGAILLHKRTKYRLGLTPTDFQIRDIVSWLDEYHQDSTG 482

Query: 1790 LSTDSLYDAGFPGALALGDAVCGMAAVKITEKDWLIWFRSHTAAEVRWGGAKHDPGEKDD 1969
            LSTDSLYDAGFPGALALG+A+CGMAAVKIT++DWL WFRSHTAAE+RWGGAKH+   KDD
Sbjct: 483  LSTDSLYDAGFPGALALGNALCGMAAVKITDEDWLFWFRSHTAAEIRWGGAKHELEAKDD 542

Query: 1970 GRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNAFKEADYLESDTKAIHTKL 2149
            GRKMHPRSSF+AFLEVVKTRSLPWKD+EMD IHSLQLILRNA+KE++  + +++ IH +L
Sbjct: 543  GRKMHPRSSFRAFLEVVKTRSLPWKDYEMDGIHSLQLILRNAYKESEEKDLESREIHARL 602

Query: 2150 NDLQIDGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLPVDEATGKH 2329
            N+LQIDG++E+EAVTSEMVRLIETA+VPI +V VDGLVNGWNTKI+DLTGL V EA G H
Sbjct: 603  NELQIDGVKEIEAVTSEMVRLIETATVPIFSVGVDGLVNGWNTKISDLTGLSVVEAIGMH 662

Query: 2330 FLTLVEESSADSVSKMLQLALEGKEERNVQFEIKTHGRRSESGPISLVVNACASRDIKDN 2509
            FL LVE+SSAD+VSKML LAL+GKEE +VQFEIKTHG+RSESGPISL+VNACAS+D+K+N
Sbjct: 663  FLALVEDSSADTVSKMLGLALQGKEEHDVQFEIKTHGQRSESGPISLIVNACASKDVKEN 722

Query: 2510 VVGVCFIAQDVTAQKNMMDKFTKIEGDYRAXXXXXXXXXXXXFGTDEFGWCSEWNAAMTK 2689
            VVGVCFIAQD+T QK+MMDKFT+IEGDYR+            FGTDEFGWCSEWNAAM K
Sbjct: 723  VVGVCFIAQDITTQKSMMDKFTRIEGDYRSIIQNPNPLIPPIFGTDEFGWCSEWNAAMIK 782

Query: 2690 LSGWSRDDVINKMLLGEIFGMNRACCRLKNQEAFVNLGIVLNNAVTGQDNEKLPFGFFSR 2869
            LSGW R+ VI+KMLLGE+FG+N+ACCRLKNQEA+VNLG+VLNN VTGQ++ K+ FGFFSR
Sbjct: 783  LSGWGREAVIDKMLLGEVFGLNKACCRLKNQEAYVNLGVVLNNTVTGQESGKVSFGFFSR 842

Query: 2870 TGKYVECLLCVSKKLDEEGVVTGVFCFXXXXXXXXXXXXHVQRLSEQTALKRLRVLSYIR 3049
            +GKYV CLLCVSKK+D EG VTG+FCF            H+QR+SEQTA KRLRVL+YIR
Sbjct: 843  SGKYVACLLCVSKKVDSEGSVTGLFCFLQLASPELQQALHIQRISEQTASKRLRVLAYIR 902

Query: 3050 REIRNPLSGIIFSRKMMEGTNLDDEQKNLLRTSVYCQRQLNKILDDTDLDHIIEGYLDLE 3229
            REIR+PLSGIIFSRK+MEGT+L+DEQKN++RTS++CQ Q+NKIL+DTDLDHIIEGYLDLE
Sbjct: 903  REIRSPLSGIIFSRKLMEGTDLNDEQKNIVRTSLHCQSQMNKILEDTDLDHIIEGYLDLE 962

Query: 3230 MVEFKLHEVLIVSISQVMLKSNGKGIMIVDNLPPNLSTETLYGDSLRLQQVLAAFLLTAV 3409
            MVEFKLHEVLI SISQV+ KSNGKGI IVDNL PNLS ETLYGDSLRLQQVLAAFLL AV
Sbjct: 963  MVEFKLHEVLIASISQVISKSNGKGIKIVDNLAPNLSNETLYGDSLRLQQVLAAFLLIAV 1022

Query: 3410 TSTPSGGQLAIAASMTKDSIGESVQLGHLEFRITHTGGGVPQELLNQMFGD-AVDASEDG 3586
             STPSGGQL +AA++ KDSIGE VQLG LE RITH GGGVPQE+LNQMFGD   DASEDG
Sbjct: 1023 DSTPSGGQLGVAATLAKDSIGEFVQLGRLECRITH-GGGVPQEILNQMFGDEPTDASEDG 1081

Query: 3587 ISLFISRKLVKLMNGEVQYLREAGRSTFIISVELAISNK 3703
            ISLFISRKLVKLM G++QYLREAGRSTFIISVE+AISNK
Sbjct: 1082 ISLFISRKLVKLMKGDIQYLREAGRSTFIISVEIAISNK 1120


>gb|ABA46868.1| phytochrome A [Solanum tuberosum]
          Length = 1123

 Score = 1807 bits (4680), Expect = 0.0
 Identities = 888/1119 (79%), Positives = 996/1119 (89%), Gaps = 5/1119 (0%)
 Frame = +2

Query: 362  SKQPGQSSINSARSRHSARVVAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNV---DQRPK 532
            S +P QSS  S+RS+HSAR++AQTSIDAKLHA              VRVT+V   ++RPK
Sbjct: 3    SSRPSQSSATSSRSKHSARIIAQTSIDAKLHADFEESGDSFDYSSSVRVTSVAGDEERPK 62

Query: 533  PDKVTTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEHPV 712
             DKVTT YLHQIQKGK IQPFG LLALDEKT +VIA+SENAPEMLTMVSHAVPSVGEHPV
Sbjct: 63   SDKVTTAYLHQIQKGKFIQPFGSLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPV 122

Query: 713  LGIGSDIRNVFTAPSAAALHKALGFGEVSLLNPVLVHCKTSGKPFYAIIHRVTGSLIIDF 892
            LGIG+DIR +FT PS AAL KALGFGEVSLLNPVLVHCK SGKPFYAI+HRVTGSLIIDF
Sbjct: 123  LGIGTDIRTIFTGPSGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLIIDF 182

Query: 893  EPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMVQEVFELTGYDRVMIY 1072
            EPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGS+ERLCDTMVQEVFELTGYDRVM Y
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGY 242

Query: 1073 KFHDDDHGEVLTEVTKPGLEPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 1252
            KFHDDDHGEV++E+TKPGLEPY+GLHYPATDIPQAARFLFMKNKVRMICDCRA HVKVVQ
Sbjct: 243  KFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQ 302

Query: 1253 DENLPIELTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEG--SDSTHPERRK 1426
            DE LP +LTLCGSTLRAPH CHLQYMENMNS+ASLVM+VVVN+GDEEG  SDS+  ++RK
Sbjct: 303  DEKLPFDLTLCGSTLRAPHYCHLQYMENMNSVASLVMAVVVNDGDEEGESSDSSQSQKRK 362

Query: 1427 RLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDM 1606
            RLWGLVVCH+T+PRFVPFPLRYACEFLAQVFAIHVNKELELENQ LEKNILRTQTLLCDM
Sbjct: 363  RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLCDM 422

Query: 1607 LLRDAPLGIVSQSPNVMDLVKCDGAVLIYKNKKYRLGITPNDFQVRDIVSWLDEYHRDST 1786
            L+RDAPLGIVSQSPN+MDLVKCDGA L+YKNK +RLG+ P+DFQ+ DIVSWL EYH DST
Sbjct: 423  LMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDST 482

Query: 1787 GLSTDSLYDAGFPGALALGDAVCGMAAVKITEKDWLIWFRSHTAAEVRWGGAKHDPGEKD 1966
            GLSTDSLYDAGFPGALALGDAVCGMAAV+I++KDWL W+RSHTAAEVRWGGAKH+PGEKD
Sbjct: 483  GLSTDSLYDAGFPGALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKD 542

Query: 1967 DGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNAFKEADYLESDTKAIHTK 2146
            DGRKMHPRSSFKAFLEVVKTRS+PWKD+EMDAIHSLQLILRNAFK+AD + S+T +IHTK
Sbjct: 543  DGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDADAVNSNTNSIHTK 602

Query: 2147 LNDLQIDGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLPVDEATGK 2326
            LNDL+IDG+QELEAVT+EM+RLIETASVPI AVDVDG VNGWNTK+A+LTGLPVDEA GK
Sbjct: 603  LNDLRIDGMQELEAVTAEMIRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGK 662

Query: 2327 HFLTLVEESSADSVSKMLQLALEGKEERNVQFEIKTHGRRSESGPISLVVNACASRDIKD 2506
            H LTLVE+SS D+V+KML+LAL+GKEERNV+FEIK HG   +S PISL+VNACAS+D++D
Sbjct: 663  HLLTLVEDSSVDTVNKMLELALQGKEERNVEFEIKAHGPSRDSSPISLIVNACASKDVRD 722

Query: 2507 NVVGVCFIAQDVTAQKNMMDKFTKIEGDYRAXXXXXXXXXXXXFGTDEFGWCSEWNAAMT 2686
            +VVGVCFIAQD+T QK++MDKFT+IEGDYRA            FGTD+FGWCSEWN+AMT
Sbjct: 723  SVVGVCFIAQDITGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMT 782

Query: 2687 KLSGWSRDDVINKMLLGEIFGMNRACCRLKNQEAFVNLGIVLNNAVTGQDNEKLPFGFFS 2866
            KL+GW RDDV++KMLLGE+FG   ACCRLKNQEAFVN G++LNNA+TGQ++EK+PFGFF 
Sbjct: 783  KLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGFFG 842

Query: 2867 RTGKYVECLLCVSKKLDEEGVVTGVFCFXXXXXXXXXXXXHVQRLSEQTALKRLRVLSYI 3046
            R GKYVECLLCVSK+LD+EG VTG+FCF            HVQRLSEQTALKRL+VL+YI
Sbjct: 843  RYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYI 902

Query: 3047 RREIRNPLSGIIFSRKMMEGTNLDDEQKNLLRTSVYCQRQLNKILDDTDLDHIIEGYLDL 3226
            RR+I+NPLSGIIFS KM+EGT+L +EQKN+L TS  CQRQLNKILDDTDLD IIEGYLDL
Sbjct: 903  RRQIKNPLSGIIFSWKMLEGTSLGEEQKNILHTSAQCQRQLNKILDDTDLDSIIEGYLDL 962

Query: 3227 EMVEFKLHEVLIVSISQVMLKSNGKGIMIVDNLPPNLSTETLYGDSLRLQQVLAAFLLTA 3406
            EM+EFKLHEVL+ SISQVM+KSNGK IMI +++  +L  ETLYGDS RLQQVLA FLL +
Sbjct: 963  EMLEFKLHEVLVASISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLLVS 1022

Query: 3407 VTSTPSGGQLAIAASMTKDSIGESVQLGHLEFRITHTGGGVPQELLNQMFGDAVDASEDG 3586
            V STPSGGQL+I+  +TKD IGESVQL  LEFRI HTGGGVP+ELL+QM G  VDASE+G
Sbjct: 1023 VNSTPSGGQLSISGRLTKDRIGESVQLALLEFRIRHTGGGVPEELLSQMLGSEVDASEEG 1082

Query: 3587 ISLFISRKLVKLMNGEVQYLREAGRSTFIISVELAISNK 3703
            I L +SRKLVKLMNGEVQYLREAGRSTFIISVELA++ K
Sbjct: 1083 IFLLVSRKLVKLMNGEVQYLREAGRSTFIISVELAVATK 1121


>sp|P30733.2|PHYA_SOLTU RecName: Full=Phytochrome A gi|7550158|gb|AAB21533.2| type A
            phytochrome [Solanum tuberosum]
          Length = 1123

 Score = 1801 bits (4666), Expect = 0.0
 Identities = 887/1119 (79%), Positives = 994/1119 (88%), Gaps = 5/1119 (0%)
 Frame = +2

Query: 362  SKQPGQSSINSARSRHSARVVAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNV---DQRPK 532
            S +P QSS  S+RS+HSAR++AQTSIDAKLHA              VRVTNV   +QRPK
Sbjct: 3    SSRPSQSSTTSSRSKHSARIIAQTSIDAKLHADFEESGDSFDYSSSVRVTNVAEGEQRPK 62

Query: 533  PDKVTTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEHPV 712
             DKVTT YLHQIQKGK IQPFGCLLALDEKT +VIA+SENAPEMLTMVSHAVPSVGEHPV
Sbjct: 63   SDKVTTAYLHQIQKGKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPV 122

Query: 713  LGIGSDIRNVFTAPSAAALHKALGFGEVSLLNPVLVHCKTSGKPFYAIIHRVTGSLIIDF 892
            LGIG DIR +FT PS AAL KALGFGEVSLLNPVLVHCK SGKPFYAI+HRVTGSLIIDF
Sbjct: 123  LGIGIDIRTIFTGPSGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLIIDF 182

Query: 893  EPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMVQEVFELTGYDRVMIY 1072
            EPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGS+ERLCDTMVQEVFELTGYDRVM Y
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGY 242

Query: 1073 KFHDDDHGEVLTEVTKPGLEPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 1252
            KFHDDDHGEV++E+TKPGLEPY+GLHYPATDIPQAARFLFMKNKVRMICDCRA HVKVVQ
Sbjct: 243  KFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQ 302

Query: 1253 DENLPIELTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEG--SDSTHPERRK 1426
            DE LP +LTLCGSTLRAPH CHLQYMENMNSIASLVM+VVVN+GDEEG  SDS+  ++RK
Sbjct: 303  DEKLPFDLTLCGSTLRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRK 362

Query: 1427 RLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDM 1606
            RLWGLVV H+T+PRF PFPLRYACEFLAQVFAI VNKELELENQ LEKNILRTQTLLCDM
Sbjct: 363  RLWGLVVSHNTTPRFAPFPLRYACEFLAQVFAILVNKELELENQFLEKNILRTQTLLCDM 422

Query: 1607 LLRDAPLGIVSQSPNVMDLVKCDGAVLIYKNKKYRLGITPNDFQVRDIVSWLDEYHRDST 1786
            L+RDAPLGIVSQSPN+MDL+KCDGA L+YKNK +RLG+ P+DFQ+ DIVSWL EYH DST
Sbjct: 423  LMRDAPLGIVSQSPNIMDLIKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDST 482

Query: 1787 GLSTDSLYDAGFPGALALGDAVCGMAAVKITEKDWLIWFRSHTAAEVRWGGAKHDPGEKD 1966
            GLSTDSLYDAGFPGALALGDAVCGMAAV+I++KDWL W+RSHTAAEVRWGGAKH+PGEKD
Sbjct: 483  GLSTDSLYDAGFPGALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKD 542

Query: 1967 DGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNAFKEADYLESDTKAIHTK 2146
            DGRKMHPRSSFK FLEVVKTRS+PWKD+EMD IHSLQLILRNAFK+AD + S+T +IHTK
Sbjct: 543  DGRKMHPRSSFKGFLEVVKTRSIPWKDYEMDRIHSLQLILRNAFKDADAVNSNTISIHTK 602

Query: 2147 LNDLQIDGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLPVDEATGK 2326
            LNDL+IDG+QELEAVT+EMVRLIETASVPI AVDVDG VNGWNTK+A+LTGLPVDEA GK
Sbjct: 603  LNDLKIDGMQELEAVTAEMVRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGK 662

Query: 2327 HFLTLVEESSADSVSKMLQLALEGKEERNVQFEIKTHGRRSESGPISLVVNACASRDIKD 2506
            H LTLVE+SS D+V+KML+LAL+G+EERNV+FEIKTHG   +S PISL+VNACAS+D++D
Sbjct: 663  HLLTLVEDSSVDTVNKMLELALQGQEERNVEFEIKTHGPSRDSSPISLIVNACASKDVRD 722

Query: 2507 NVVGVCFIAQDVTAQKNMMDKFTKIEGDYRAXXXXXXXXXXXXFGTDEFGWCSEWNAAMT 2686
            +VVGVCFIAQD+T QK++MDKFT+IEGDYRA            FGTD+FGWCSEWN+AMT
Sbjct: 723  SVVGVCFIAQDITGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMT 782

Query: 2687 KLSGWSRDDVINKMLLGEIFGMNRACCRLKNQEAFVNLGIVLNNAVTGQDNEKLPFGFFS 2866
             L+GW RDDV++KMLLGE+FG   ACCRLKNQEAFVN G++LNNA+TGQ++EK+PFGFF+
Sbjct: 783  MLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGFFA 842

Query: 2867 RTGKYVECLLCVSKKLDEEGVVTGVFCFXXXXXXXXXXXXHVQRLSEQTALKRLRVLSYI 3046
            R GKYVECLLCVSK+LD+EG VTG+FCF            HVQRLSEQTALKRL+VL+YI
Sbjct: 843  RYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYI 902

Query: 3047 RREIRNPLSGIIFSRKMMEGTNLDDEQKNLLRTSVYCQRQLNKILDDTDLDHIIEGYLDL 3226
            RR+IRNPLSGIIFSRKM+EGT+L +EQKN+L TS  CQRQL+KILDDTDLD IIEGYLDL
Sbjct: 903  RRQIRNPLSGIIFSRKMLEGTSLGEEQKNILHTSAQCQRQLDKILDDTDLDSIIEGYLDL 962

Query: 3227 EMVEFKLHEVLIVSISQVMLKSNGKGIMIVDNLPPNLSTETLYGDSLRLQQVLAAFLLTA 3406
            EM+EFKLHEVL+ SISQVM+KSNGK IMI +++  +L  ETLYGDS RLQQVLA FLL +
Sbjct: 963  EMLEFKLHEVLVASISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLLVS 1022

Query: 3407 VTSTPSGGQLAIAASMTKDSIGESVQLGHLEFRITHTGGGVPQELLNQMFGDAVDASEDG 3586
            V STPSGG+L+I+  +TKD IGESVQL  LEFRI HTGGGVP+ELL+QMFG   DASE+G
Sbjct: 1023 VNSTPSGGKLSISGKLTKDRIGESVQLALLEFRIRHTGGGVPEELLSQMFGSEADASEEG 1082

Query: 3587 ISLFISRKLVKLMNGEVQYLREAGRSTFIISVELAISNK 3703
            ISL +SRKLVKLMNGEVQYLREAGRSTFIISVELA++ K
Sbjct: 1083 ISLLVSRKLVKLMNGEVQYLREAGRSTFIISVELAVATK 1121


>ref|NP_001234490.1| alternative transcript type 3 [Solanum lycopersicum]
            gi|3492795|emb|CAA05086.1| phyA [Solanum lycopersicum]
            gi|3492797|emb|CAA05087.1| phyA [Solanum lycopersicum]
            gi|3492799|emb|CAA05088.1| phyA [Solanum lycopersicum]
            gi|3492801|emb|CAA05089.1| phyA [Solanum lycopersicum]
          Length = 1123

 Score = 1801 bits (4666), Expect = 0.0
 Identities = 885/1117 (79%), Positives = 997/1117 (89%), Gaps = 5/1117 (0%)
 Frame = +2

Query: 362  SKQPGQSSINSARSRHSARVVAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNV---DQRPK 532
            S +P QSS  S+RS+HSAR+VAQTSIDAKLHA              VRVT+V   +++PK
Sbjct: 3    SSRPSQSSTTSSRSKHSARIVAQTSIDAKLHADFEESGDSFDYSSSVRVTSVAGDEEKPK 62

Query: 533  PDKVTTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEHPV 712
             DKVTT YLHQIQKGK IQPFGCLLALDEKT +VIA+SENAPEMLTMVSHAVPSVGEHPV
Sbjct: 63   SDKVTTAYLHQIQKGKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPV 122

Query: 713  LGIGSDIRNVFTAPSAAALHKALGFGEVSLLNPVLVHCKTSGKPFYAIIHRVTGSLIIDF 892
            LGIG+DIR +FT PS AAL KALGFGEVSLLNPVLVHCK SGKPFYAI+HRVTGSLI+DF
Sbjct: 123  LGIGTDIRTIFTGPSGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLILDF 182

Query: 893  EPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMVQEVFELTGYDRVMIY 1072
            EPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGS+ERLCDTMVQEVFELTGYDRVM Y
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGY 242

Query: 1073 KFHDDDHGEVLTEVTKPGLEPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 1252
            KFH+DDHGEV++E+TKPGLEPY+GLHYPATDIPQAARFLFMKNKVRMICDCRA HVKVVQ
Sbjct: 243  KFHEDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQ 302

Query: 1253 DENLPIELTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEG--SDSTHPERRK 1426
            DE LP +LTLCGSTLRAPH CHLQYMENMNSIASLVM+VVVN+GDEEG  SDS+  ++RK
Sbjct: 303  DEKLPFDLTLCGSTLRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRK 362

Query: 1427 RLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDM 1606
            RLWGLVVCH+T+PRFVPFPLRYACEFLAQVFAIHVNKELELENQ LEKNILRTQTLLCDM
Sbjct: 363  RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLCDM 422

Query: 1607 LLRDAPLGIVSQSPNVMDLVKCDGAVLIYKNKKYRLGITPNDFQVRDIVSWLDEYHRDST 1786
            L+RDAPLGIVSQSPN+MDLVKCDGA L+YKNK +RLG+ P+DFQ++DIVSWL EYH DST
Sbjct: 423  LMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKIHRLGMNPSDFQLQDIVSWLCEYHTDST 482

Query: 1787 GLSTDSLYDAGFPGALALGDAVCGMAAVKITEKDWLIWFRSHTAAEVRWGGAKHDPGEKD 1966
            GLSTDSLYDAGFPGALALGDAVCGMAAV+I++KDWL WFRSHTAAEVRWGGAKH+PGEKD
Sbjct: 483  GLSTDSLYDAGFPGALALGDAVCGMAAVRISDKDWLFWFRSHTAAEVRWGGAKHEPGEKD 542

Query: 1967 DGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNAFKEADYLESDTKAIHTK 2146
            DGRKMHPRSSFKAFLEVVKTRS+PWKD+EMDAIHSLQLILRNAFK+A+ + S+T +I+ K
Sbjct: 543  DGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDAEVVNSNTNSIYKK 602

Query: 2147 LNDLQIDGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLPVDEATGK 2326
            LNDL+IDG+QELE+VT+EMVRLIETA VPILAVDVDG VNGWNTKIA+LTGLPVDEA GK
Sbjct: 603  LNDLKIDGMQELESVTAEMVRLIETALVPILAVDVDGQVNGWNTKIAELTGLPVDEAIGK 662

Query: 2327 HFLTLVEESSADSVSKMLQLALEGKEERNVQFEIKTHGRRSESGPISLVVNACASRDIKD 2506
            H LTLVE+SS D+V+KML+LAL+GKEE+NV+FEIKTHG   +S PISL+VNACAS+D++D
Sbjct: 663  HLLTLVEDSSVDTVNKMLELALQGKEEKNVEFEIKTHGPSRDSSPISLIVNACASKDVRD 722

Query: 2507 NVVGVCFIAQDVTAQKNMMDKFTKIEGDYRAXXXXXXXXXXXXFGTDEFGWCSEWNAAMT 2686
            NVVGVCF+A D+T QK++MDKFT+IEGDYRA            FGTD+FGWCSEWN AMT
Sbjct: 723  NVVGVCFMAHDITGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNTAMT 782

Query: 2687 KLSGWSRDDVINKMLLGEIFGMNRACCRLKNQEAFVNLGIVLNNAVTGQDNEKLPFGFFS 2866
            KL+GW RDDV++KMLLGE+FG   ACCRLKNQEAFVN G+VLNNA+TGQ++EK+PFGFF+
Sbjct: 783  KLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVVLNNAITGQESEKIPFGFFA 842

Query: 2867 RTGKYVECLLCVSKKLDEEGVVTGVFCFXXXXXXXXXXXXHVQRLSEQTALKRLRVLSYI 3046
            R GKYVECLLCVSK+LD+EG VTG+FCF            +VQRLSEQTALKRL+VL+YI
Sbjct: 843  RYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALYVQRLSEQTALKRLKVLAYI 902

Query: 3047 RREIRNPLSGIIFSRKMMEGTNLDDEQKNLLRTSVYCQRQLNKILDDTDLDHIIEGYLDL 3226
            RR+IRNPLSGIIFSRKM+EGT+L +EQKN+L TS  CQRQLNKILDDTDLD II+GYLDL
Sbjct: 903  RRQIRNPLSGIIFSRKMLEGTSLGEEQKNILHTSAQCQRQLNKILDDTDLDSIIDGYLDL 962

Query: 3227 EMVEFKLHEVLIVSISQVMLKSNGKGIMIVDNLPPNLSTETLYGDSLRLQQVLAAFLLTA 3406
            EM+EFKLHEVL+ SISQVM+KSNGK IMI +++  +L  ETLYGDS RLQQVLA FLL +
Sbjct: 963  EMLEFKLHEVLVASISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLLVS 1022

Query: 3407 VTSTPSGGQLAIAASMTKDSIGESVQLGHLEFRITHTGGGVPQELLNQMFGDAVDASEDG 3586
            V +TPSGGQL+I+  +TKD IGESVQL  LEFRI HTGGGVP+ELL QMFG   DASE+G
Sbjct: 1023 VNATPSGGQLSISGRLTKDRIGESVQLALLEFRIRHTGGGVPEELLGQMFGSEADASEEG 1082

Query: 3587 ISLFISRKLVKLMNGEVQYLREAGRSTFIISVELAIS 3697
            ISL +SRKLVKLMNGEVQYLREAG+STFIISVELA++
Sbjct: 1083 ISLLVSRKLVKLMNGEVQYLREAGQSTFIISVELAVA 1119


>sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1 gi|297478|emb|CAA47284.1| type-A
            phytochrome [Nicotiana tabacum]
          Length = 1124

 Score = 1799 bits (4659), Expect = 0.0
 Identities = 887/1119 (79%), Positives = 995/1119 (88%), Gaps = 5/1119 (0%)
 Frame = +2

Query: 362  SKQPGQSSINSARSRHSARVVAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNV---DQRPK 532
            S +P QSS  SARS+HSAR++AQT+IDAKLHA              VRVT+V   +++PK
Sbjct: 3    SSRPSQSSTTSARSKHSARIIAQTTIDAKLHADFEESGDSFDYSSSVRVTSVAGDERKPK 62

Query: 533  PDKVTTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEHPV 712
             D+VTT YL+QIQKGK IQPFGCLLALDEKTF+VIA+SENAPEMLTMVSHAVPSVGE P 
Sbjct: 63   SDRVTTAYLNQIQKGKFIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGELPA 122

Query: 713  LGIGSDIRNVFTAPSAAALHKALGFGEVSLLNPVLVHCKTSGKPFYAIIHRVTGSLIIDF 892
            LGIG+DIR +FT PSAAAL KALGFGEVSLLNPVLVHCKTSGKP+YAI+HRVTGSLIIDF
Sbjct: 123  LGIGTDIRTIFTGPSAAALQKALGFGEVSLLNPVLVHCKTSGKPYYAIVHRVTGSLIIDF 182

Query: 893  EPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMVQEVFELTGYDRVMIY 1072
            EPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LPSGS+ERLCDTMVQEVFELTGYDRVM Y
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVMTY 242

Query: 1073 KFHDDDHGEVLTEVTKPGLEPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 1252
            KFHDDDHGEV+ E+TKPGL+PY+GLHYPATDIPQAARFLFMKNKVRMICDCRA HVKVVQ
Sbjct: 243  KFHDDDHGEVVAEITKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQ 302

Query: 1253 DENLPIELTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEG--SDSTHPERRK 1426
            DE LP +LTLCGSTLRAPH CHLQYMENM+SIASLVM+VVVN+GDEEG  SDST  ++RK
Sbjct: 303  DEKLPFDLTLCGSTLRAPHYCHLQYMENMSSIASLVMAVVVNDGDEEGESSDSTQSQKRK 362

Query: 1427 RLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDM 1606
            RLWGLVVCH+T+PRFVPFPLRYACEFLAQVFAIHVNKELELE+Q+LEKNILRTQTLLCDM
Sbjct: 363  RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDM 422

Query: 1607 LLRDAPLGIVSQSPNVMDLVKCDGAVLIYKNKKYRLGITPNDFQVRDIVSWLDEYHRDST 1786
            L+R APLGIVSQSPN+MDLVKCDGA L+YKNK +RLG+TP+DFQ+ DIVSWL EYH DST
Sbjct: 423  LMRVAPLGIVSQSPNIMDLVKCDGAALLYKNKIHRLGMTPSDFQLHDIVSWLSEYHTDST 482

Query: 1787 GLSTDSLYDAGFPGALALGDAVCGMAAVKITEKDWLIWFRSHTAAEVRWGGAKHDPGEKD 1966
            GLSTDSLYDAGFPGALALGD VCGMAAV+I++K WL W+RSHTAAEVRWGGAKH+PGEKD
Sbjct: 483  GLSTDSLYDAGFPGALALGDVVCGMAAVRISDKGWLFWYRSHTAAEVRWGGAKHEPGEKD 542

Query: 1967 DGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNAFKEADYLESDTKAIHTK 2146
            DGRKMHPRSSFKAFLEVVKTRS+PWKD+EMDAIHSLQLILRNA K+AD ++S+T  IHTK
Sbjct: 543  DGRKMHPRSSFKAFLEVVKTRSVPWKDYEMDAIHSLQLILRNASKDADAMDSNTNIIHTK 602

Query: 2147 LNDLQIDGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLPVDEATGK 2326
            LNDL+IDG+QELEAVT+EMVRLIETASVPI AVDVDG +NGWNTKIA+LTGLPVDEA G 
Sbjct: 603  LNDLKIDGLQELEAVTAEMVRLIETASVPIFAVDVDGQLNGWNTKIAELTGLPVDEAIGN 662

Query: 2327 HFLTLVEESSADSVSKMLQLALEGKEERNVQFEIKTHGRRSESGPISLVVNACASRDIKD 2506
            H LTLVE+SS D+VSKML+LAL+GKEERNV+FEIKTHG   +S PISL+VNACASRD+ D
Sbjct: 663  HLLTLVEDSSVDTVSKMLELALQGKEERNVEFEIKTHGPSGDSSPISLIVNACASRDVGD 722

Query: 2507 NVVGVCFIAQDVTAQKNMMDKFTKIEGDYRAXXXXXXXXXXXXFGTDEFGWCSEWNAAMT 2686
            +VVGVCFIAQD+T QKN+MDKFT+IEGDYRA            FGTD+FGWCSEWN+AMT
Sbjct: 723  SVVGVCFIAQDITGQKNIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMT 782

Query: 2687 KLSGWSRDDVINKMLLGEIFGMNRACCRLKNQEAFVNLGIVLNNAVTGQDNEKLPFGFFS 2866
            KL+GW RDDVI+KMLLGE+FG   ACCRLKNQEAFVN G+VLNNA+TGQ+  K+ FGFF+
Sbjct: 783  KLTGWRRDDVIDKMLLGEVFGTQAACCRLKNQEAFVNFGVVLNNAMTGQECAKISFGFFA 842

Query: 2867 RTGKYVECLLCVSKKLDEEGVVTGVFCFXXXXXXXXXXXXHVQRLSEQTALKRLRVLSYI 3046
            R GKYVECLLCVSK+LD EG VTG+FCF            H+QRLSEQTALKRL+VL+YI
Sbjct: 843  RNGKYVECLLCVSKRLDREGAVTGLFCFLQLASHELQQALHIQRLSEQTALKRLKVLAYI 902

Query: 3047 RREIRNPLSGIIFSRKMMEGTNLDDEQKNLLRTSVYCQRQLNKILDDTDLDHIIEGYLDL 3226
            RR+IRNPLSGIIFSRKM+EGTNL +EQKN+LRTS  CQRQLNKILDDTDLD II+GYLDL
Sbjct: 903  RRQIRNPLSGIIFSRKMLEGTNLGEEQKNILRTSSQCQRQLNKILDDTDLDSIIDGYLDL 962

Query: 3227 EMVEFKLHEVLIVSISQVMLKSNGKGIMIVDNLPPNLSTETLYGDSLRLQQVLAAFLLTA 3406
            EM+EFKLHEVL+ SISQ+M+KSNGK IMIV+++  +L  ETLYGDS RLQQVLA FLL  
Sbjct: 963  EMLEFKLHEVLVASISQIMMKSNGKNIMIVNDMVEDLLNETLYGDSPRLQQVLANFLLVC 1022

Query: 3407 VTSTPSGGQLAIAASMTKDSIGESVQLGHLEFRITHTGGGVPQELLNQMFGDAVDASEDG 3586
            V STPSGGQL+I+ ++TKD IGESVQL  LE RI+HTGGGVP+ELL+QMFG   +ASE+G
Sbjct: 1023 VNSTPSGGQLSISGTLTKDRIGESVQLALLEVRISHTGGGVPEELLSQMFGTEAEASEEG 1082

Query: 3587 ISLFISRKLVKLMNGEVQYLREAGRSTFIISVELAISNK 3703
            ISL ISRKLVKLMNGEVQYLREAGRSTFIISVELA++ K
Sbjct: 1083 ISLLISRKLVKLMNGEVQYLREAGRSTFIISVELAVATK 1121