BLASTX nr result

ID: Scutellaria23_contig00008342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00008342
         (803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containi...   129   6e-28
emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]   129   1e-27
ref|XP_002523895.1| pentatricopeptide repeat-containing protein,...   115   9e-24
ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21
ref|XP_002533225.1| pentatricopeptide repeat-containing protein,...   106   7e-21

>ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein At2g16880-like
            [Vitis vinifera]
          Length = 778

 Score =  129 bits (325), Expect = 6e-28
 Identities = 69/117 (58%), Positives = 78/117 (66%)
 Frame = +3

Query: 3    PDGYTFNAIIGALNDAGRTREAEELLSEMFERDKLTQQSKRSDDEQAVVARXXXXXXXXX 182
            PD YT+NAII AL D+GR REAEE +S+M E+  L  Q  + D  + VV           
Sbjct: 661  PDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSS 720

Query: 183  XVAYSEQINELCNEGRYKDAMNIFAELTQKGITVQKSTYIRLMNGLIKRRKSIMKPA 353
             VAYSE I ELC EG+YKDAM IF E  QKGITV KSTYI LM+GLIKRRKSI K A
Sbjct: 721  SVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSISKEA 777


>emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  129 bits (323), Expect = 1e-27
 Identities = 69/117 (58%), Positives = 78/117 (66%)
 Frame = +3

Query: 3    PDGYTFNAIIGALNDAGRTREAEELLSEMFERDKLTQQSKRSDDEQAVVARXXXXXXXXX 182
            PD YT+NAII AL D+GR REAEE +S+M E+  L  Q  + D  + VV           
Sbjct: 661  PDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSS 720

Query: 183  XVAYSEQINELCNEGRYKDAMNIFAELTQKGITVQKSTYIRLMNGLIKRRKSIMKPA 353
             VAYSE I ELC EG+YKDAM IF E  QKGITV KSTYI LM+GLIKRRKSI K A
Sbjct: 721  SVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSISKEA 777


>ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223536825|gb|EEF38464.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 784

 Score =  115 bits (289), Expect = 9e-24
 Identities = 60/115 (52%), Positives = 77/115 (66%)
 Frame = +3

Query: 3    PDGYTFNAIIGALNDAGRTREAEELLSEMFERDKLTQQSKRSDDEQAVVARXXXXXXXXX 182
            PD YT+NAI+ AL DAGR +EAEE +S + E+ KL  Q+   +  +   +          
Sbjct: 665  PDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPN 724

Query: 183  XVAYSEQINELCNEGRYKDAMNIFAELTQKGITVQKSTYIRLMNGLIKRRKSIMK 347
             V +SEQINELC +G+YKDAM++  E TQKGIT+ KSTYI LM GLIKRRKSI +
Sbjct: 725  SVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIKRRKSISR 779


>ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein At2g16880-like
            [Cucumis sativus] gi|449529106|ref|XP_004171542.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  107 bits (268), Expect = 2e-21
 Identities = 54/115 (46%), Positives = 73/115 (63%)
 Frame = +3

Query: 3    PDGYTFNAIIGALNDAGRTREAEELLSEMFERDKLTQQSKRSDDEQAVVARXXXXXXXXX 182
            PD YT+  II AL DAGR +EAEE   +M E   +  Q+ +    Q V+           
Sbjct: 666  PDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFK 725

Query: 183  XVAYSEQINELCNEGRYKDAMNIFAELTQKGITVQKSTYIRLMNGLIKRRKSIMK 347
             +AYS+QINELCN+ +YKDAM++F E+T++G+ + K TY+ LM GLIKRRKS  K
Sbjct: 726  SIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIKRRKSTSK 780


>ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526957|gb|EEF29157.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 605

 Score =  106 bits (264), Expect = 7e-21
 Identities = 56/109 (51%), Positives = 71/109 (65%)
 Frame = +3

Query: 3   PDGYTFNAIIGALNDAGRTREAEELLSEMFERDKLTQQSKRSDDEQAVVARXXXXXXXXX 182
           PD YT NAI+ AL DAGR +EAEE +S + E+ KL  Q+   +  +   +          
Sbjct: 497 PDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQTISLNKRKTESSSETSQESDPN 556

Query: 183 XVAYSEQINELCNEGRYKDAMNIFAELTQKGITVQKSTYIRLMNGLIKR 329
            VA+SEQINELC +G+YKDAM++  E TQKGI + KSTYI LM GLIKR
Sbjct: 557 SVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYISLMEGLIKR 605


Top