BLASTX nr result

ID: Scutellaria23_contig00008224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00008224
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helica...   232   2e-59
emb|CBI30650.3| unnamed protein product [Vitis vinifera]              232   2e-59
ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinu...   223   2e-56
ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helica...   221   5e-56
tpg|DAA52873.1| TPA: putative RNA helicase family protein [Zea m...   215   3e-54

>ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helicase DHX35 [Vitis
           vinifera]
          Length = 695

 Score =  232 bits (592), Expect = 2e-59
 Identities = 112/137 (81%), Positives = 127/137 (92%), Gaps = 1/137 (0%)
 Frame = +3

Query: 105 MSRFWKPGAEKPRLIEDEEGGVLFYSASVSSS-GYGHPNMEKHRQMLPVYKYRTAILYLV 281
           MS+FWKPG+EKPRL++DEEGGVLFYSAS SSS G+G+ N+EK RQ LPVYKYRTAILYLV
Sbjct: 1   MSQFWKPGSEKPRLLDDEEGGVLFYSASASSSSGFGYSNIEKQRQRLPVYKYRTAILYLV 60

Query: 282 ERHGTTIVVGETGSGKTTQIPQYLKEAGWADNGLMIACTQPRRLAVQSVAARVSQEMGVK 461
           E H TTI+VGETGSGKTTQIPQYLKEAGWAD G +IACTQPRRLAVQ+VA+RV++EMGVK
Sbjct: 61  ETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRVAEEMGVK 120

Query: 462 LGEEVGYTIRFEDITNT 512
           LGEEVGYTIRFED++ T
Sbjct: 121 LGEEVGYTIRFEDLSKT 137


>emb|CBI30650.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score =  232 bits (592), Expect = 2e-59
 Identities = 112/137 (81%), Positives = 127/137 (92%), Gaps = 1/137 (0%)
 Frame = +3

Query: 105 MSRFWKPGAEKPRLIEDEEGGVLFYSASVSSS-GYGHPNMEKHRQMLPVYKYRTAILYLV 281
           MS+FWKPG+EKPRL++DEEGGVLFYSAS SSS G+G+ N+EK RQ LPVYKYRTAILYLV
Sbjct: 1   MSQFWKPGSEKPRLLDDEEGGVLFYSASASSSSGFGYSNIEKQRQRLPVYKYRTAILYLV 60

Query: 282 ERHGTTIVVGETGSGKTTQIPQYLKEAGWADNGLMIACTQPRRLAVQSVAARVSQEMGVK 461
           E H TTI+VGETGSGKTTQIPQYLKEAGWAD G +IACTQPRRLAVQ+VA+RV++EMGVK
Sbjct: 61  ETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRVAEEMGVK 120

Query: 462 LGEEVGYTIRFEDITNT 512
           LGEEVGYTIRFED++ T
Sbjct: 121 LGEEVGYTIRFEDLSKT 137


>ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223538218|gb|EEF39827.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 696

 Score =  223 bits (567), Expect = 2e-56
 Identities = 107/138 (77%), Positives = 125/138 (90%), Gaps = 2/138 (1%)
 Frame = +3

Query: 105 MSRFWKPGAEKPRLIEDEEGGVLFYSASVSSS--GYGHPNMEKHRQMLPVYKYRTAILYL 278
           M+ FWKPG EKP L++DEEGGV+F S+SVSSS  GYG+ ++EK RQ LPVYKYRTAILYL
Sbjct: 1   MALFWKPGTEKPPLLDDEEGGVVFLSSSVSSSSSGYGYVSIEKQRQRLPVYKYRTAILYL 60

Query: 279 VERHGTTIVVGETGSGKTTQIPQYLKEAGWADNGLMIACTQPRRLAVQSVAARVSQEMGV 458
           VE H T+++VGETGSGKTTQIPQYLKEAGWAD G +IACTQPRRLAVQ+VA+RV++EMGV
Sbjct: 61  VETHATSVIVGETGSGKTTQIPQYLKEAGWADGGRLIACTQPRRLAVQAVASRVAEEMGV 120

Query: 459 KLGEEVGYTIRFEDITNT 512
           KLGEEVGYTIRFED+TN+
Sbjct: 121 KLGEEVGYTIRFEDLTNS 138


>ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helicase DHX35-like [Cucumis
           sativus] gi|449515633|ref|XP_004164853.1| PREDICTED:
           probable ATP-dependent RNA helicase DHX35-like [Cucumis
           sativus]
          Length = 696

 Score =  221 bits (563), Expect = 5e-56
 Identities = 107/137 (78%), Positives = 123/137 (89%), Gaps = 2/137 (1%)
 Frame = +3

Query: 105 MSRFWKPGAEKPRLIEDEEGGVLFYSASVSSS--GYGHPNMEKHRQMLPVYKYRTAILYL 278
           M++FWKPG EKPRL++D EGGVLF+S+S SSS  G+G  + EK RQ LPVYKYRTAILYL
Sbjct: 1   MAQFWKPGTEKPRLLDDGEGGVLFFSSSYSSSSSGFGFSSTEKQRQRLPVYKYRTAILYL 60

Query: 279 VERHGTTIVVGETGSGKTTQIPQYLKEAGWADNGLMIACTQPRRLAVQSVAARVSQEMGV 458
           VE H TTI+VGETGSGKTTQIPQ+LKEAGWAD G +IACTQPRRLAVQ+VA+RV++EMGV
Sbjct: 61  VETHATTIIVGETGSGKTTQIPQFLKEAGWADGGRVIACTQPRRLAVQAVASRVAEEMGV 120

Query: 459 KLGEEVGYTIRFEDITN 509
           KLGEEVGYTIRFED+TN
Sbjct: 121 KLGEEVGYTIRFEDLTN 137


>tpg|DAA52873.1| TPA: putative RNA helicase family protein [Zea mays]
          Length = 940

 Score =  215 bits (548), Expect = 3e-54
 Identities = 107/139 (76%), Positives = 123/139 (88%), Gaps = 4/139 (2%)
 Frame = +3

Query: 105 MSRFWKPGAEKPR--LIEDEEGGVLFY--SASVSSSGYGHPNMEKHRQMLPVYKYRTAIL 272
           MSRFWKPG+EKP   L++DEEGGV+F   S+SVSSSG+G+ ++E+ RQ LPVYKYR AIL
Sbjct: 242 MSRFWKPGSEKPSTLLVDDEEGGVVFLPSSSSVSSSGFGYASLERQRQRLPVYKYRKAIL 301

Query: 273 YLVERHGTTIVVGETGSGKTTQIPQYLKEAGWADNGLMIACTQPRRLAVQSVAARVSQEM 452
           YLVERH TTIVVGETGSGK+TQIPQYLKEAGWAD G +I CTQPRRLAVQ VA+RV++E+
Sbjct: 302 YLVERHATTIVVGETGSGKSTQIPQYLKEAGWADGGRLIGCTQPRRLAVQMVASRVAEEV 361

Query: 453 GVKLGEEVGYTIRFEDITN 509
           GVKLGEEVGYTIRFED TN
Sbjct: 362 GVKLGEEVGYTIRFEDQTN 380


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