BLASTX nr result

ID: Scutellaria23_contig00008196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00008196
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW90572.1| ribosomal protein L32 [Solanum tuberosum]              101   1e-19
dbj|BAG80685.1| ribosomal protein L32 [Populus alba]                   97   3e-18
ref|XP_002311319.1| predicted protein [Populus trichocarpa] gi|2...    96   5e-18
ref|XP_003589494.1| hypothetical protein MTR_1g025320 [Medicago ...    96   7e-18
ref|XP_002316112.1| predicted protein [Populus trichocarpa] gi|2...    96   7e-18

>gb|AFW90572.1| ribosomal protein L32 [Solanum tuberosum]
          Length = 132

 Score =  101 bits (252), Expect = 1e-19
 Identities = 51/87 (58%), Positives = 66/87 (75%)
 Frame = -2

Query: 608 RRLAHSLAQPAPLGTAINHQINNSLPPFVLPEDHEDNNWSIEKPDSPFFGGAMELMAVPK 429
           RR  H  ++PAPL + ++ ++  + P  VLPE+  ++N     P+SPF  G+MELMAVPK
Sbjct: 22  RRFIHITSRPAPLDSVVD-RLTATSPSLVLPENENNSNMF---PNSPFNWGSMELMAVPK 77

Query: 428 RKVTPHKRGIRNGPKALKPVPVIIRCK 348
           +KV+PHKRGIRNGPKALKPVPVIIRCK
Sbjct: 78  KKVSPHKRGIRNGPKALKPVPVIIRCK 104


>dbj|BAG80685.1| ribosomal protein L32 [Populus alba]
          Length = 138

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 53/95 (55%), Positives = 61/95 (64%), Gaps = 6/95 (6%)
 Frame = -2

Query: 614 GFRRLAHSLAQPAPLGTAINHQINNSLPPFVLPEDHEDNNWSIEKPDSPF------FGGA 453
           G R+  H +A   PL  A+   I  + P F LPE   + + S    D  F      FGG+
Sbjct: 21  GIRKWTHVVAMAPPLDGALESSI--AAPQFTLPEFDANQDTSKNSSDFGFTFPGFSFGGS 78

Query: 452 MELMAVPKRKVTPHKRGIRNGPKALKPVPVIIRCK 348
           MELMAVPKRKVTPHKRGIRNGPKALKP+PVIIRCK
Sbjct: 79  MELMAVPKRKVTPHKRGIRNGPKALKPIPVIIRCK 113


>ref|XP_002311319.1| predicted protein [Populus trichocarpa] gi|222851139|gb|EEE88686.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 57/113 (50%), Positives = 66/113 (58%), Gaps = 6/113 (5%)
 Frame = -2

Query: 668 LTVSMLRNVGRRTEFAVGGFRRLAHSLAQPAPLGTAINHQINNSLPPFVLPEDHEDNNWS 489
           L + ML+           G RR AH  A   PL  A+   I +  P   LPE   + + S
Sbjct: 3   LRLGMLKCAAGGNSGCRSGIRRWAHVPAMARPLDGALESYIAS--PQLTLPELDANQDTS 60

Query: 488 IEKPDSPF------FGGAMELMAVPKRKVTPHKRGIRNGPKALKPVPVIIRCK 348
               +S F      FGG+MELMAVPKRKVTPHKRGIRNGPKALKP+PVIIRCK
Sbjct: 61  SNSSNSGFGLPGFSFGGSMELMAVPKRKVTPHKRGIRNGPKALKPIPVIIRCK 113


>ref|XP_003589494.1| hypothetical protein MTR_1g025320 [Medicago truncatula]
           gi|355478542|gb|AES59745.1| hypothetical protein
           MTR_1g025320 [Medicago truncatula]
          Length = 151

 Score = 95.9 bits (237), Expect = 7e-18
 Identities = 55/111 (49%), Positives = 70/111 (63%)
 Frame = -2

Query: 680 HTAQLTVSMLRNVGRRTEFAVGGFRRLAHSLAQPAPLGTAINHQINNSLPPFVLPEDHED 501
           H   + +++LR+  R+   A+G F RL HS+ Q  PL  +I+H I +  P  VLPE    
Sbjct: 24  HIMTMRIAILRDTRRKLGGALG-FNRLIHSVPQSPPLAGSIDHGIQSLKP--VLPEFCSP 80

Query: 500 NNWSIEKPDSPFFGGAMELMAVPKRKVTPHKRGIRNGPKALKPVPVIIRCK 348
                       FGG+MELMAVPKRK +PHKRGIRNGPKALKPVPV++ CK
Sbjct: 81  TF---------SFGGSMELMAVPKRKTSPHKRGIRNGPKALKPVPVLVLCK 122


>ref|XP_002316112.1| predicted protein [Populus trichocarpa]
           gi|224112197|ref|XP_002316116.1| predicted protein
           [Populus trichocarpa] gi|222865152|gb|EEF02283.1|
           predicted protein [Populus trichocarpa]
           gi|222865156|gb|EEF02287.1| predicted protein [Populus
           trichocarpa]
          Length = 138

 Score = 95.9 bits (237), Expect = 7e-18
 Identities = 56/113 (49%), Positives = 65/113 (57%), Gaps = 6/113 (5%)
 Frame = -2

Query: 668 LTVSMLRNVGRRTEFAVGGFRRLAHSLAQPAPLGTAINHQINNSLPPFVLPEDHEDNNWS 489
           L + ML+           G R+  H +A   PL  A+   I +  P F LPE   + + S
Sbjct: 3   LRLGMLKCAAEANNGCRLGIRKWTHVVAMAPPLDGALESSIAS--PQFTLPEFDANQDTS 60

Query: 488 IEKPDSPF------FGGAMELMAVPKRKVTPHKRGIRNGPKALKPVPVIIRCK 348
               D  F      FGG+MELMAVPKRKVTPHKRGIRNGPKALKP PVIIRCK
Sbjct: 61  NNSSDFGFTFPGFSFGGSMELMAVPKRKVTPHKRGIRNGPKALKPTPVIIRCK 113


Top