BLASTX nr result

ID: Scutellaria23_contig00008127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00008127
         (1389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_564622.1| RNA-binding S4 domain-containing protein [Arabi...   417   e-114
ref|XP_002282453.1| PREDICTED: putative RNA-binding protein ylmH...   417   e-114
emb|CAN67613.1| hypothetical protein VITISV_010260 [Vitis vinifera]   417   e-114
ref|NP_001241156.1| uncharacterized protein LOC100793767 [Glycin...   404   e-110
ref|XP_002316899.1| predicted protein [Populus trichocarpa] gi|2...   404   e-110

>ref|NP_564622.1| RNA-binding S4 domain-containing protein [Arabidopsis thaliana]
            gi|16648939|gb|AAL24321.1| Unknown protein [Arabidopsis
            thaliana] gi|24899783|gb|AAN65106.1| Unknown protein
            [Arabidopsis thaliana] gi|27311617|gb|AAO00774.1| Unknown
            protein [Arabidopsis thaliana] gi|30984534|gb|AAP42730.1|
            At1g53120 [Arabidopsis thaliana]
            gi|332194772|gb|AEE32893.1| RNA-binding S4
            domain-containing protein [Arabidopsis thaliana]
          Length = 320

 Score =  417 bits (1073), Expect = e-114
 Identities = 202/272 (74%), Positives = 244/272 (89%)
 Frame = +3

Query: 321  ALDVFHSPQAVKGDVDVFLKGVGDKDTIEEVKRILDMAKRASLRQEVLHTDFLTPPVVKE 500
            AL   +S +A+KGDVD  LKGVGD+   +EVK+IL+MA+RAS ++EVLHTDFLTPP+VKE
Sbjct: 49   ALRRCYSAEAIKGDVDFLLKGVGDQAVAKEVKQILEMARRASSKREVLHTDFLTPPIVKE 108

Query: 501  SMLALAKMADIKMVAQGGYPEAERCRLSVGHPDVLTSDPDIVAALSISGNFGFETCTHGD 680
            S+  L K AD+K+VAQGGYPEAERCR+S+GHPDVLTSDPDIVAALSI+GNFGF+ C+HGD
Sbjct: 109  SVSLLEKFADVKIVAQGGYPEAERCRISIGHPDVLTSDPDIVAALSITGNFGFQPCSHGD 168

Query: 681  FLGAVLGTGIVRDKLGDIILQGEKGAHILVVPELVDFLVSSLDKVRNVSVTCEKIPLLAL 860
            FLGA+LGTGI R+KLGDI++Q EKGA +L+VPELVDF+V++LDKV NV VTC KIPLLAL
Sbjct: 169  FLGAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLAL 228

Query: 861  EYQPPRTNTLKTVEASLRLDSIASAGFKISRSKMANLISNGDVRVNWATVTKSNTTLKTG 1040
            EY+PPRTN+ KTVEASLR+D++ASAGFKISRSK+ +LIS+ DVRVNWATVTK+ T +KTG
Sbjct: 229  EYEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTG 288

Query: 1041 DIVSVSGKGRLKIGEINSTRKGKFGVELIRFL 1136
            D+VSVSGKGRLKIGEIN T+KGKF VE+IR+L
Sbjct: 289  DVVSVSGKGRLKIGEINETKKGKFAVEIIRYL 320


>ref|XP_002282453.1| PREDICTED: putative RNA-binding protein ylmH [Vitis vinifera]
            gi|302142996|emb|CBI20291.3| unnamed protein product
            [Vitis vinifera]
          Length = 321

 Score =  417 bits (1072), Expect = e-114
 Identities = 204/267 (76%), Positives = 239/267 (89%)
 Frame = +3

Query: 336  HSPQAVKGDVDVFLKGVGDKDTIEEVKRILDMAKRASLRQEVLHTDFLTPPVVKESMLAL 515
            H  QA+KGD +  LKGV D+ TIE VK IL+MAKRAS R+EVLHTDFLTPPV+KESM+ L
Sbjct: 55   HLAQAMKGDANSLLKGVADRSTIEAVKHILEMAKRASARREVLHTDFLTPPVLKESMIVL 114

Query: 516  AKMADIKMVAQGGYPEAERCRLSVGHPDVLTSDPDIVAALSISGNFGFETCTHGDFLGAV 695
             K+AD+K VAQGGYP+AERCRLSVGH +VLT+ PDIVAAL I+GNFGF++C+HGDFLGA+
Sbjct: 115  EKLADMKAVAQGGYPQAERCRLSVGHSEVLTTAPDIVAALRITGNFGFQSCSHGDFLGAI 174

Query: 696  LGTGIVRDKLGDIILQGEKGAHILVVPELVDFLVSSLDKVRNVSVTCEKIPLLALEYQPP 875
            LGTGI R+KLGDIILQGEKGA +L+VPELVDFLVSSL+KV NVSV+C K+PLLALEY+ P
Sbjct: 175  LGTGIAREKLGDIILQGEKGAQVLIVPELVDFLVSSLEKVGNVSVSCTKMPLLALEYEEP 234

Query: 876  RTNTLKTVEASLRLDSIASAGFKISRSKMANLISNGDVRVNWATVTKSNTTLKTGDIVSV 1055
            RT T KT+E SLR+D++ASAGFK+SRSK+ +LISNGDVRVNW TVTK+ TTLKTGD+VSV
Sbjct: 235  RTTTFKTIELSLRVDALASAGFKLSRSKLVDLISNGDVRVNWTTVTKNGTTLKTGDVVSV 294

Query: 1056 SGKGRLKIGEINSTRKGKFGVELIRFL 1136
            SGKGRLKIGEINST+KGK+ VELIRFL
Sbjct: 295  SGKGRLKIGEINSTKKGKYAVELIRFL 321


>emb|CAN67613.1| hypothetical protein VITISV_010260 [Vitis vinifera]
          Length = 269

 Score =  417 bits (1072), Expect = e-114
 Identities = 204/267 (76%), Positives = 239/267 (89%)
 Frame = +3

Query: 336  HSPQAVKGDVDVFLKGVGDKDTIEEVKRILDMAKRASLRQEVLHTDFLTPPVVKESMLAL 515
            H  QA+KGD +  LKGV D+ TIE VK IL+MAKRAS R+EVLHTDFLTPPV+KESM+ L
Sbjct: 3    HLAQAMKGDANSLLKGVADRSTIEAVKHILEMAKRASARREVLHTDFLTPPVLKESMIVL 62

Query: 516  AKMADIKMVAQGGYPEAERCRLSVGHPDVLTSDPDIVAALSISGNFGFETCTHGDFLGAV 695
             K+AD+K VAQGGYP+AERCRLSVGH +VLT+ PDIVAAL I+GNFGF++C+HGDFLGA+
Sbjct: 63   EKLADMKAVAQGGYPQAERCRLSVGHSEVLTTAPDIVAALRITGNFGFQSCSHGDFLGAI 122

Query: 696  LGTGIVRDKLGDIILQGEKGAHILVVPELVDFLVSSLDKVRNVSVTCEKIPLLALEYQPP 875
            LGTGI R+KLGDIILQGEKGA +L+VPELVDFLVSSL+KV NVSV+C K+PLLALEY+ P
Sbjct: 123  LGTGIAREKLGDIILQGEKGAQVLIVPELVDFLVSSLEKVGNVSVSCTKMPLLALEYEEP 182

Query: 876  RTNTLKTVEASLRLDSIASAGFKISRSKMANLISNGDVRVNWATVTKSNTTLKTGDIVSV 1055
            RT T KT+E SLR+D++ASAGFK+SRSK+ +LISNGDVRVNW TVTK+ TTLKTGD+VSV
Sbjct: 183  RTTTFKTIELSLRVDALASAGFKLSRSKLVDLISNGDVRVNWTTVTKNGTTLKTGDVVSV 242

Query: 1056 SGKGRLKIGEINSTRKGKFGVELIRFL 1136
            SGKGRLKIGEINST+KGK+ VELIRFL
Sbjct: 243  SGKGRLKIGEINSTKKGKYAVELIRFL 269


>ref|NP_001241156.1| uncharacterized protein LOC100793767 [Glycine max]
            gi|255642537|gb|ACU21532.1| unknown [Glycine max]
          Length = 324

 Score =  404 bits (1039), Expect = e-110
 Identities = 192/272 (70%), Positives = 242/272 (88%)
 Frame = +3

Query: 321  ALDVFHSPQAVKGDVDVFLKGVGDKDTIEEVKRILDMAKRASLRQEVLHTDFLTPPVVKE 500
            A  V  + QA+KG+VD+ LKGVG++   +EVK IL+MA+RASL++E+LHTDFLTPPV+KE
Sbjct: 53   ASGVSQTVQALKGEVDLLLKGVGERSVTKEVKHILEMARRASLKREILHTDFLTPPVLKE 112

Query: 501  SMLALAKMADIKMVAQGGYPEAERCRLSVGHPDVLTSDPDIVAALSISGNFGFETCTHGD 680
            SM  L K+AD+K +AQGGYP+AERCR+SVGHP+ LTSDPDI++ALSI+GNF FE C+HGD
Sbjct: 113  SMQVLEKLADVKAIAQGGYPQAERCRISVGHPEELTSDPDIISALSITGNFQFEPCSHGD 172

Query: 681  FLGAVLGTGIVRDKLGDIILQGEKGAHILVVPELVDFLVSSLDKVRNVSVTCEKIPLLAL 860
            FLG++LGTGIVR+KLGDIILQGE+GA I+VVPELV+FL+S+L KVRNV V+C KIPL++L
Sbjct: 173  FLGSILGTGIVREKLGDIILQGEQGAQIIVVPELVEFLMSTLVKVRNVPVSCTKIPLISL 232

Query: 861  EYQPPRTNTLKTVEASLRLDSIASAGFKISRSKMANLISNGDVRVNWATVTKSNTTLKTG 1040
            +Y+PPRT + KT+EASLR+D++ASAGFK+SRSK+ ++ISNGDVR+NW  VT   TTLK+G
Sbjct: 233  DYEPPRTKSFKTIEASLRVDALASAGFKVSRSKLVDMISNGDVRINWIPVTTKGTTLKSG 292

Query: 1041 DIVSVSGKGRLKIGEINSTRKGKFGVELIRFL 1136
            DIVS+SGKGRLKIGEINST+KGKF VELIR+L
Sbjct: 293  DIVSISGKGRLKIGEINSTKKGKFAVELIRYL 324


>ref|XP_002316899.1| predicted protein [Populus trichocarpa] gi|222859964|gb|EEE97511.1|
            predicted protein [Populus trichocarpa]
          Length = 268

 Score =  404 bits (1037), Expect = e-110
 Identities = 200/267 (74%), Positives = 236/267 (88%)
 Frame = +3

Query: 336  HSPQAVKGDVDVFLKGVGDKDTIEEVKRILDMAKRASLRQEVLHTDFLTPPVVKESMLAL 515
            H  QA KG+V V LKGV DK  IEEVKRILDMA+RASLR+EVLHTDFLTPP +KES+  L
Sbjct: 3    HVAQATKGEV-VALKGVEDKSVIEEVKRILDMARRASLRREVLHTDFLTPPTLKESLHVL 61

Query: 516  AKMADIKMVAQGGYPEAERCRLSVGHPDVLTSDPDIVAALSISGNFGFETCTHGDFLGAV 695
             K+AD+K +AQGGYP+AERCRLSVGHP+ LTSDPDIVAALSI+GNFGF+ C+HGDFLGA+
Sbjct: 62   EKLADVKAIAQGGYPQAERCRLSVGHPETLTSDPDIVAALSITGNFGFQLCSHGDFLGAI 121

Query: 696  LGTGIVRDKLGDIILQGEKGAHILVVPELVDFLVSSLDKVRNVSVTCEKIPLLALEYQPP 875
            LGTGI R+KLGDII+ G K A +L+VP+LVD++VSSLDKV +VSV+C  IPL A+EY+PP
Sbjct: 122  LGTGIARNKLGDIIVLGGKRAQVLLVPDLVDYIVSSLDKVGDVSVSCTPIPLHAIEYEPP 181

Query: 876  RTNTLKTVEASLRLDSIASAGFKISRSKMANLISNGDVRVNWATVTKSNTTLKTGDIVSV 1055
            RT + KTVEASLR+D++ASAGFKISRSK+ +LISN DVRVNW T+TK+NTTLKTGD+VSV
Sbjct: 182  RTKSFKTVEASLRVDALASAGFKISRSKLVDLISNKDVRVNWTTITKNNTTLKTGDVVSV 241

Query: 1056 SGKGRLKIGEINSTRKGKFGVELIRFL 1136
            SGKGRLKIGEIN+TRKGKF VELI +L
Sbjct: 242  SGKGRLKIGEINTTRKGKFAVELIHYL 268


Top