BLASTX nr result

ID: Scutellaria23_contig00007565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00007565
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34928.3| unnamed protein product [Vitis vinifera]              171   7e-41
ref|XP_002278403.1| PREDICTED: protein farnesyltransferase subun...   171   7e-41
sp|Q04903.1|FNTB_PEA RecName: Full=Protein farnesyltransferase s...   166   2e-39
gb|AAB38796.1| farnesyltransferase beta subunit, partial [Nicoti...   162   4e-38
gb|AAQ02809.1|AF389849_1 farnesyltransferase beta subunit [Catha...   160   2e-37

>emb|CBI34928.3| unnamed protein product [Vitis vinifera]
          Length = 421

 Score =  171 bits (434), Expect = 7e-41
 Identities = 77/114 (67%), Positives = 98/114 (85%), Gaps = 1/114 (0%)
 Frame = -3

Query: 506 ASSSKGVNYGYNFIKGPIGMKPLFNSMALQQYILLCSQ-EEAGFRDKPGKRRDHYHTCYV 330
           + S+K  N G+NF+K P  M+PLF+S+ALQQYI+LCSQ +E GFRDKPGK RD+YHTCY 
Sbjct: 306 SGSAKFSNIGFNFLKEPAEMEPLFHSIALQQYIILCSQLQEGGFRDKPGKHRDYYHTCYC 365

Query: 329 LSGLSICQHSNTKDADSPPLPKDVIGPYSNLLEPLHPLYNIVLDKYYEAYDFFA 168
           LSGLS+ Q+S +KDADSPPLP+ V GPYSNLLEP+HPLYN++LD Y+EA++FF+
Sbjct: 366 LSGLSVAQYSYSKDADSPPLPRAVFGPYSNLLEPIHPLYNVILDLYHEAHEFFS 419


>ref|XP_002278403.1| PREDICTED: protein farnesyltransferase subunit beta-like isoform 1
           [Vitis vinifera]
          Length = 438

 Score =  171 bits (434), Expect = 7e-41
 Identities = 77/114 (67%), Positives = 98/114 (85%), Gaps = 1/114 (0%)
 Frame = -3

Query: 506 ASSSKGVNYGYNFIKGPIGMKPLFNSMALQQYILLCSQ-EEAGFRDKPGKRRDHYHTCYV 330
           + S+K  N G+NF+K P  M+PLF+S+ALQQYI+LCSQ +E GFRDKPGK RD+YHTCY 
Sbjct: 323 SGSAKFSNIGFNFLKEPAEMEPLFHSIALQQYIILCSQLQEGGFRDKPGKHRDYYHTCYC 382

Query: 329 LSGLSICQHSNTKDADSPPLPKDVIGPYSNLLEPLHPLYNIVLDKYYEAYDFFA 168
           LSGLS+ Q+S +KDADSPPLP+ V GPYSNLLEP+HPLYN++LD Y+EA++FF+
Sbjct: 383 LSGLSVAQYSYSKDADSPPLPRAVFGPYSNLLEPIHPLYNVILDLYHEAHEFFS 436


>sp|Q04903.1|FNTB_PEA RecName: Full=Protein farnesyltransferase subunit beta;
           Short=FTase-beta; AltName: Full=CAAX farnesyltransferase
           subunit beta; AltName: Full=Ras proteins
           prenyltransferase subunit beta gi|169049|gb|AAA33649.1|
           farnesyl-protein transferase beta-subunit [Pisum
           sativum]
          Length = 419

 Score =  166 bits (421), Expect = 2e-39
 Identities = 80/124 (64%), Positives = 101/124 (81%), Gaps = 2/124 (1%)
 Frame = -3

Query: 527 VQQEELNASSSKGV-NYGYNFIKGPIGMKPLFNSMALQQYILLCSQEE-AGFRDKPGKRR 354
           ++ E +N S S  V N GYNFI      +PLF+S+ALQQYILLCSQE+  G RDKPGKRR
Sbjct: 296 IRHEGMNESCSSDVKNIGYNFISEWRQSEPLFHSIALQQYILLCSQEQDGGLRDKPGKRR 355

Query: 353 DHYHTCYVLSGLSICQHSNTKDADSPPLPKDVIGPYSNLLEPLHPLYNIVLDKYYEAYDF 174
           DHYH+CY LSGLS+CQ+S +K  DSPPLPK V+GPYSNLLEP+HPL+N+VLD+Y EA++F
Sbjct: 356 DHYHSCYCLSGLSLCQYSWSKRPDSPPLPKVVMGPYSNLLEPIHPLFNVVLDRYREAHEF 415

Query: 173 FARI 162
           F+++
Sbjct: 416 FSQL 419


>gb|AAB38796.1| farnesyltransferase beta subunit, partial [Nicotiana glutinosa]
          Length = 446

 Score =  162 bits (410), Expect = 4e-38
 Identities = 78/126 (61%), Positives = 98/126 (77%), Gaps = 2/126 (1%)
 Frame = -3

Query: 539 SCQPVQQEELNASS-SKGVNYGYNFIKGPIGMKPLFNSMALQQYILLCSQEEAGFRDKPG 363
           +C   Q+ + NAS  +K  + GY+F+   I M+P+F+S  LQQY+LLCSQ + GFRDKPG
Sbjct: 319 TCPLGQEGQENASDPTKIADTGYDFVNRTIAMRPVFDSFYLQQYVLLCSQIDGGFRDKPG 378

Query: 362 KRRDHYHTCYVLSGLSICQHSNTKDADSPPLPKDVIGPYS-NLLEPLHPLYNIVLDKYYE 186
           K RDHYHTCY LSGLSI Q+S T +AD+PPLP+DV GPYS NLLE +HPLYN+VLD+YYE
Sbjct: 379 KGRDHYHTCYCLSGLSIAQYSWTNEADAPPLPRDVFGPYSQNLLEQIHPLYNVVLDRYYE 438

Query: 185 AYDFFA 168
           A  FF+
Sbjct: 439 ARSFFS 444


>gb|AAQ02809.1|AF389849_1 farnesyltransferase beta subunit [Catharanthus roseus]
           gi|47933946|gb|AAT39532.1| farnesyltransferase beta
           subunit [Catharanthus roseus]
          Length = 455

 Score =  160 bits (405), Expect = 2e-37
 Identities = 77/125 (61%), Positives = 96/125 (76%)
 Frame = -3

Query: 539 SCQPVQQEELNASSSKGVNYGYNFIKGPIGMKPLFNSMALQQYILLCSQEEAGFRDKPGK 360
           +C   Q+E+ ++ S+   + GYNFI     +  LFNSM LQQYILLCSQEE GFRDKPGK
Sbjct: 331 ACNLNQEEDNDSPSANLTDAGYNFISKRTAIGSLFNSMLLQQYILLCSQEEQGFRDKPGK 390

Query: 359 RRDHYHTCYVLSGLSICQHSNTKDADSPPLPKDVIGPYSNLLEPLHPLYNIVLDKYYEAY 180
           RRD+YHTCY LSGLSICQ+ +  D +SPP  +DV+GPY+NLLE +HPLY IVLD+Y EA 
Sbjct: 391 RRDYYHTCYCLSGLSICQYCSV-DLNSPPFCRDVLGPYTNLLEQVHPLYGIVLDRYNEAR 449

Query: 179 DFFAR 165
           DFF++
Sbjct: 450 DFFSK 454


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