BLASTX nr result

ID: Scutellaria23_contig00007290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00007290
         (896 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306429.1| high mobility group family [Populus trichoca...   122   9e-26
gb|ABK94286.1| unknown [Populus trichocarpa]                          121   3e-25
gb|AAC50019.1| high mobility group protein 2 HMG2 [Ipomoea nil]       114   2e-23
gb|ADD74180.2| high mobility group box 3 protein [Gossypium hirs...   110   6e-22
ref|XP_004146173.1| PREDICTED: HMG1/2-like protein-like [Cucumis...   108   1e-21

>ref|XP_002306429.1| high mobility group family [Populus trichocarpa]
           gi|222855878|gb|EEE93425.1| high mobility group family
           [Populus trichocarpa]
          Length = 144

 Score =  122 bits (307), Expect = 9e-26
 Identities = 69/127 (54%), Positives = 76/127 (59%), Gaps = 3/127 (2%)
 Frame = -1

Query: 683 MKGGKSKADSRKADGRLXXXXXXXXXXXXXXXXXXXXXXP---SAFFVFMEDFRKIYKEK 513
           MKGG+SK+DSR  D +L                          SAFFVFMEDFRK YKE 
Sbjct: 1   MKGGRSKSDSRNNDAKLKRKGAGAGTKASKKAAKDPNKPKRPASAFFVFMEDFRKQYKES 60

Query: 512 HPNNKSVAAVGKAGGDKWKSLTDEEKAPYVXXXXXXXXXXXXXXXXYNRKLAGEGDDESD 333
           HPNNKSVAAVGKAGGDKWKSL++ EKAPY                 YN++LAG  DDESD
Sbjct: 61  HPNNKSVAAVGKAGGDKWKSLSEAEKAPYAAKAEKRKFEYNKDMAAYNKRLAGGNDDESD 120

Query: 332 KSKSEVN 312
           KSKSEVN
Sbjct: 121 KSKSEVN 127


>gb|ABK94286.1| unknown [Populus trichocarpa]
          Length = 144

 Score =  121 bits (303), Expect = 3e-25
 Identities = 68/127 (53%), Positives = 76/127 (59%), Gaps = 3/127 (2%)
 Frame = -1

Query: 683 MKGGKSKADSRKADGRLXXXXXXXXXXXXXXXXXXXXXXP---SAFFVFMEDFRKIYKEK 513
           MKGG+SK+DSR  D +L                          SAFFVFMEDFRK YKE 
Sbjct: 1   MKGGRSKSDSRNNDAKLKRKGAGAGTKASKKAAKDPNKPKRPASAFFVFMEDFRKQYKES 60

Query: 512 HPNNKSVAAVGKAGGDKWKSLTDEEKAPYVXXXXXXXXXXXXXXXXYNRKLAGEGDDESD 333
           HPNNKSVAAVGKAGGDKWKSL++ EKAP+                 YN++LAG  DDESD
Sbjct: 61  HPNNKSVAAVGKAGGDKWKSLSEAEKAPFAAKAEKRKFEYNKDMAAYNKRLAGGNDDESD 120

Query: 332 KSKSEVN 312
           KSKSEVN
Sbjct: 121 KSKSEVN 127


>gb|AAC50019.1| high mobility group protein 2 HMG2 [Ipomoea nil]
          Length = 146

 Score =  114 bits (286), Expect = 2e-23
 Identities = 68/126 (53%), Positives = 73/126 (57%), Gaps = 2/126 (1%)
 Frame = -1

Query: 683 MKGGKSKADSRKADGRLXXXXXXXXXXXXXXXXXXXXXXPSAFFVFMEDFRKIYKEKHPN 504
           MKGGKSKA S                             PSAFFVFMEDFRK YKEKHPN
Sbjct: 1   MKGGKSKAKSDNKLAVKKRGCETKKSKKSVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPN 60

Query: 503 NKSVAAVGKAGGDKWKSLTDEEKAPYVXXXXXXXXXXXXXXXXYNRKLAGEG--DDESDK 330
           NKSVAAVGKAGGDKWK LTD EKAP++                YNRK AGE   ++ESDK
Sbjct: 61  NKSVAAVGKAGGDKWKQLTDAEKAPFIAKAEKRKQEYEKSMQAYNRKQAGEAADEEESDK 120

Query: 329 SKSEVN 312
           S+SEVN
Sbjct: 121 SRSEVN 126


>gb|ADD74180.2| high mobility group box 3 protein [Gossypium hirsutum]
          Length = 139

 Score =  110 bits (274), Expect = 6e-22
 Identities = 65/127 (51%), Positives = 77/127 (60%), Gaps = 3/127 (2%)
 Frame = -1

Query: 683 MKGGKSKADSRKADGRLXXXXXXXXXXXXXXXXXXXXXXP--SAFFVFMEDFRKIYKEKH 510
           MKGG++K+DS +A  +L                         SAFFVFME+FRK YKE +
Sbjct: 1   MKGGQTKSDSMQAGNKLKGKGAGAGKRAKKAAKDPNKPKRPASAFFVFMEEFRKQYKEAN 60

Query: 509 PNNKSVAAVGKAGGDKWKSLTDEEKAPYVXXXXXXXXXXXXXXXXYNRKLAGEG-DDESD 333
           P+N+SV+AVGKAGG+KWKS+TD EKAPYV                YN KLAG G DDESD
Sbjct: 61  PDNRSVSAVGKAGGEKWKSMTDAEKAPYVQKAEKRKSEYNKKMQAYNLKLAGGGNDDESD 120

Query: 332 KSKSEVN 312
           KSKSEVN
Sbjct: 121 KSKSEVN 127


>ref|XP_004146173.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
           gi|449495123|ref|XP_004159740.1| PREDICTED: HMG1/2-like
           protein-like [Cucumis sativus]
           gi|63020536|gb|AAY26151.1| high mobility group protein
           [Cucumis sativus]
          Length = 146

 Score =  108 bits (271), Expect = 1e-21
 Identities = 63/130 (48%), Positives = 76/130 (58%), Gaps = 6/130 (4%)
 Frame = -1

Query: 683 MKGGKSKADSRKADGRLXXXXXXXXXXXXXXXXXXXXXXP--SAFFVFMEDFRKIYKEKH 510
           MKGGKSK   +K D +L                         SAFFVFME+FRK YK++H
Sbjct: 1   MKGGKSKGAPKKTDTKLKSKSAGASKKSAKAAKDPNKPKRPASAFFVFMEEFRKQYKKEH 60

Query: 509 PNNKSVAAVGKAGGDKWKSLTDEEKAPYVXXXXXXXXXXXXXXXXYNRKLA----GEGDD 342
           PNNKSVAAVGKAGGDKWKS++D EKAPY+                YN+++A    G  ++
Sbjct: 61  PNNKSVAAVGKAGGDKWKSMSDAEKAPYINKAEKRKTEYNKSMQAYNKRIAEGGNGAEEE 120

Query: 341 ESDKSKSEVN 312
           ESDKSKSEVN
Sbjct: 121 ESDKSKSEVN 130


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