BLASTX nr result

ID: Scutellaria23_contig00007235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00007235
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002878157.1| 40S ribosomal protein S2 [Arabidopsis lyrata...   214   6e-54
ref|XP_003538262.1| PREDICTED: 40S ribosomal protein S2-4-like [...   214   8e-54
ref|XP_003538244.1| PREDICTED: 40S ribosomal protein S2-4-like [...   214   8e-54
ref|XP_003518614.1| PREDICTED: 40S ribosomal protein S2-4-like [...   214   8e-54
ref|XP_003525227.1| PREDICTED: 40S ribosomal protein S2-4-like [...   214   8e-54

>ref|XP_002878157.1| 40S ribosomal protein S2 [Arabidopsis lyrata subsp. lyrata]
           gi|297323995|gb|EFH54416.1| 40S ribosomal protein S2
           [Arabidopsis lyrata subsp. lyrata]
          Length = 272

 Score =  214 bits (545), Expect = 6e-54
 Identities = 104/106 (98%), Positives = 106/106 (100%)
 Frame = +3

Query: 3   QRTRFKAFVVVGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHT 182
           QRTRFKAFVVVGDSNGHVGLGVKCSKEVATAIRGAIILAKLSV+P+RRGYWGNKIGKPHT
Sbjct: 101 QRTRFKAFVVVGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPHT 160

Query: 183 VPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTS 320
           VPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTS
Sbjct: 161 VPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTS 206


>ref|XP_003538262.1| PREDICTED: 40S ribosomal protein S2-4-like [Glycine max]
          Length = 275

 Score =  214 bits (544), Expect = 8e-54
 Identities = 105/106 (99%), Positives = 106/106 (100%)
 Frame = +3

Query: 3   QRTRFKAFVVVGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHT 182
           QRTRFKAFVVVGD+NGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHT
Sbjct: 105 QRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHT 164

Query: 183 VPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTS 320
           VPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTS
Sbjct: 165 VPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTS 210


>ref|XP_003538244.1| PREDICTED: 40S ribosomal protein S2-4-like [Glycine max]
          Length = 275

 Score =  214 bits (544), Expect = 8e-54
 Identities = 105/106 (99%), Positives = 106/106 (100%)
 Frame = +3

Query: 3   QRTRFKAFVVVGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHT 182
           QRTRFKAFVVVGD+NGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHT
Sbjct: 105 QRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHT 164

Query: 183 VPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTS 320
           VPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTS
Sbjct: 165 VPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTS 210


>ref|XP_003518614.1| PREDICTED: 40S ribosomal protein S2-4-like [Glycine max]
          Length = 275

 Score =  214 bits (544), Expect = 8e-54
 Identities = 105/106 (99%), Positives = 106/106 (100%)
 Frame = +3

Query: 3   QRTRFKAFVVVGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHT 182
           QRTRFKAFVVVGD+NGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHT
Sbjct: 105 QRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHT 164

Query: 183 VPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTS 320
           VPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTS
Sbjct: 165 VPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTS 210


>ref|XP_003525227.1| PREDICTED: 40S ribosomal protein S2-4-like [Glycine max]
          Length = 272

 Score =  214 bits (544), Expect = 8e-54
 Identities = 105/106 (99%), Positives = 106/106 (100%)
 Frame = +3

Query: 3   QRTRFKAFVVVGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHT 182
           QRTRFKAFVVVGD+NGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHT
Sbjct: 102 QRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHT 161

Query: 183 VPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTS 320
           VPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTS
Sbjct: 162 VPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTS 207


Top