BLASTX nr result

ID: Scutellaria23_contig00007008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00007008
         (1381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520247.1| Shwachman-Bodian-Diamond syndrome protein, p...   551   e-154
ref|XP_002302200.1| predicted protein [Populus trichocarpa] gi|2...   539   e-151
ref|XP_002891277.1| transcription factor [Arabidopsis lyrata sub...   531   e-148
ref|XP_002266110.1| PREDICTED: ribosome maturation protein SBDS ...   531   e-148
ref|NP_564488.1| sequence-specific DNA binding transcription fac...   525   e-146

>ref|XP_002520247.1| Shwachman-Bodian-Diamond syndrome protein, putative [Ricinus
            communis] gi|223540466|gb|EEF42033.1|
            Shwachman-Bodian-Diamond syndrome protein, putative
            [Ricinus communis]
          Length = 356

 Score =  551 bits (1421), Expect = e-154
 Identities = 275/360 (76%), Positives = 309/360 (85%)
 Frame = -3

Query: 1343 MSKTLVQPVGQKRLTNVAVVRLKKHGNRFEIACYKNKVLSWRSHVEKDLDEVLQSQTVYS 1164
            MSK+L+QP+GQKRLTNVAVVRLKKHG RFEIACYKNKVLSWRS VEKDLDEVLQS TVYS
Sbjct: 1    MSKSLMQPIGQKRLTNVAVVRLKKHGFRFEIACYKNKVLSWRSGVEKDLDEVLQSHTVYS 60

Query: 1163 NVSKGILAKSKDLVAAFGTDDQSKVCLEILEKGELQVAGKERESQFSSQFRDIATIVMQK 984
            NVSKG+LAKSKDL  AFGTDDQ+K+CLEILEKGELQVAGKERESQ +SQFRDIAT+VMQK
Sbjct: 61   NVSKGVLAKSKDLEKAFGTDDQTKICLEILEKGELQVAGKERESQLTSQFRDIATMVMQK 120

Query: 983  TFNPETQRPYTISMIERLMHDIHFAVDPNSSSKKQALEVIRELQKLYPIKRSPMRLRLTV 804
            T NPETQRPYTISMIERLMH+IHFAVDP+SSSKKQALEVIRELQK +PIKRSPMRLRL +
Sbjct: 121  TVNPETQRPYTISMIERLMHEIHFAVDPHSSSKKQALEVIRELQKHFPIKRSPMRLRLAI 180

Query: 803  PEQNMPSLLEKINGWNCNIVSKDESGSQLSVICELEPSLFRDCDAFVRNMQGRLDILAVN 624
             E N+ SLLEK+N WN  +VSKDESGSQLSVICEL+P LFR+CD  VRN+QGRL+ILA++
Sbjct: 181  SEPNISSLLEKLNTWNATVVSKDESGSQLSVICELDPGLFRECDVLVRNLQGRLEILAMS 240

Query: 623  VHMDSDTQVDHFDDLEDERSNMEKSSAVAAAQLSEKLQKHATIXXXXXXXXSQGEAKLQK 444
            VH + D  VD +DD ED  +++ K S  +  QLSEK+QK            ++GE K  K
Sbjct: 241  VHFEGDAHVDDYDDYEDVPASIPKESTDSVVQLSEKIQKQT----ISAEKKNEGEVKQHK 296

Query: 443  CSTCNAFVGDAKEYRAHFKSEWHKHNLRRKTRQLPPLTAEECMADLDLGDSKADLKDYSF 264
            C+TCNAFVGDAKEYR HFKSEWHKHNLRRKTR L PLTAEEC+AD++L DSKADLKDYSF
Sbjct: 297  CNTCNAFVGDAKEYRDHFKSEWHKHNLRRKTRHLLPLTAEECLADVELDDSKADLKDYSF 356


>ref|XP_002302200.1| predicted protein [Populus trichocarpa] gi|222843926|gb|EEE81473.1|
            predicted protein [Populus trichocarpa]
          Length = 356

 Score =  539 bits (1389), Expect = e-151
 Identities = 269/360 (74%), Positives = 302/360 (83%)
 Frame = -3

Query: 1343 MSKTLVQPVGQKRLTNVAVVRLKKHGNRFEIACYKNKVLSWRSHVEKDLDEVLQSQTVYS 1164
            MS  L+QPVGQKRLTNVAVVRLKKHG RFEIACYKNKVLSWRS VEKDLDEVLQS TVYS
Sbjct: 1    MSVKLLQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSHTVYS 60

Query: 1163 NVSKGILAKSKDLVAAFGTDDQSKVCLEILEKGELQVAGKERESQFSSQFRDIATIVMQK 984
            NVSKG+LAK+ DLV AFG DD +K+CLEILEKGELQVAGKER+SQ SSQFRDIATIVMQK
Sbjct: 61   NVSKGVLAKNSDLVKAFGHDDHTKICLEILEKGELQVAGKERDSQLSSQFRDIATIVMQK 120

Query: 983  TFNPETQRPYTISMIERLMHDIHFAVDPNSSSKKQALEVIRELQKLYPIKRSPMRLRLTV 804
            T NPETQRPYTISM+ERLMH+IHFAVDP+SSSKKQAL+VIRELQK +PIKRSPMRLRL V
Sbjct: 121  TINPETQRPYTISMVERLMHEIHFAVDPHSSSKKQALDVIRELQKHFPIKRSPMRLRLAV 180

Query: 803  PEQNMPSLLEKINGWNCNIVSKDESGSQLSVICELEPSLFRDCDAFVRNMQGRLDILAVN 624
              Q  P+LLEK+N W+ N+VSKDESGS  SVICE++P  FRDCDA VRN+QGR++ILAV+
Sbjct: 181  IGQKFPNLLEKLNAWDANVVSKDESGSHQSVICEMDPGFFRDCDALVRNLQGRMEILAVS 240

Query: 623  VHMDSDTQVDHFDDLEDERSNMEKSSAVAAAQLSEKLQKHATIXXXXXXXXSQGEAKLQK 444
            VH + DT VD FDD ED    + K SA +  QLSEK+QK                AK  K
Sbjct: 241  VHFEGDTHVDDFDDYEDVPPALPKESADSEVQLSEKIQKQTISEEKKADTL----AKQNK 296

Query: 443  CSTCNAFVGDAKEYRAHFKSEWHKHNLRRKTRQLPPLTAEECMADLDLGDSKADLKDYSF 264
            CSTCNAFVGDAK++R HFKS+WHKHNL+RKT+QLPPLTAEEC+AD+DL DSKADLK+YSF
Sbjct: 297  CSTCNAFVGDAKQFRDHFKSDWHKHNLKRKTKQLPPLTAEECLADMDLNDSKADLKEYSF 356


>ref|XP_002891277.1| transcription factor [Arabidopsis lyrata subsp. lyrata]
            gi|297337119|gb|EFH67536.1| transcription factor
            [Arabidopsis lyrata subsp. lyrata]
          Length = 370

 Score =  531 bits (1368), Expect = e-148
 Identities = 262/370 (70%), Positives = 305/370 (82%), Gaps = 10/370 (2%)
 Frame = -3

Query: 1343 MSKTLVQPVGQKRLTNVAVVRLKKHGNRFEIACYKNKVLSWRSHVEKDLDEVLQSQTVYS 1164
            MSKTLVQPVGQKRLTNVAVVRLKK GNRFEIACYKNKVLSWRS VEKD+DEVLQS TVYS
Sbjct: 1    MSKTLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYS 60

Query: 1163 NVSKGILAKSKDLVAAFGTDDQSKVCLEILEKGELQVAGKERESQFSSQFRDIATIVMQK 984
            NVSKG+LAKSKDL+ AFG+DD +K+C++ILEKGELQVAGKERESQFSSQFRDIATIVMQK
Sbjct: 61   NVSKGVLAKSKDLMKAFGSDDHTKICIDILEKGELQVAGKERESQFSSQFRDIATIVMQK 120

Query: 983  TFNPETQRPYTISMIERLMHDIHFAVDPNSSSKKQALEVIRELQKLYPIKRSPMRLRLTV 804
            T NPETQRPYTI M+ERLMH+IHFAVDP+S+SKKQAL+VIRELQK +PIKRSPMRLRLTV
Sbjct: 121  TINPETQRPYTIGMVERLMHEIHFAVDPHSNSKKQALDVIRELQKQFPIKRSPMRLRLTV 180

Query: 803  PEQNMPSLLEKINGWNCNIVSKDESGSQLSVICELEPSLFRDCDAFVRNMQGRLDILAVN 624
            P QN PSLLEK+  W  ++VSKDESG+Q+S +CE+EP LFR+CD+ VRNMQGRL+ILAV+
Sbjct: 181  PVQNFPSLLEKLKEWEASVVSKDESGTQMSTVCEMEPGLFRECDSHVRNMQGRLEILAVS 240

Query: 623  VHMDSDTQVDHFDDLEDERSNMEKSSAVA----------AAQLSEKLQKHATIXXXXXXX 474
            VH + DT +DH+D+ +D      K    A            +LS+K+QK           
Sbjct: 241  VHAEGDTNMDHYDEHDDMAFQTHKPLLPADTETKDLTDPVIELSKKMQKQEISTADTIKQ 300

Query: 473  XSQGEAKLQKCSTCNAFVGDAKEYRAHFKSEWHKHNLRRKTRQLPPLTAEECMADLDLGD 294
                E K  KCSTCN FVG+AKEYR H KS+WHKHNL+RKTR+LPPL+AEECM+++D+ D
Sbjct: 301  EGGEEKKGTKCSTCNTFVGEAKEYREHCKSDWHKHNLKRKTRKLPPLSAEECMSEIDMDD 360

Query: 293  SKADLKDYSF 264
            S+ADLKDYSF
Sbjct: 361  SRADLKDYSF 370


>ref|XP_002266110.1| PREDICTED: ribosome maturation protein SBDS [Vitis vinifera]
            gi|302142747|emb|CBI19950.3| unnamed protein product
            [Vitis vinifera]
          Length = 358

 Score =  531 bits (1367), Expect = e-148
 Identities = 267/361 (73%), Positives = 304/361 (84%), Gaps = 1/361 (0%)
 Frame = -3

Query: 1343 MSKTLVQPVGQKRLTNVAVVRLKKHGNRFEIACYKNKVLSWRSHVEKDLDEVLQSQTVYS 1164
            MS+ + QP+GQKRLTNVAVVRLKK G RFEIACYKNKVLSWRS VEKDLDEVLQS  VYS
Sbjct: 1    MSRVVQQPIGQKRLTNVAVVRLKKKGIRFEIACYKNKVLSWRSGVEKDLDEVLQSHIVYS 60

Query: 1163 NVSKGILAKSKDLVAAFGTD-DQSKVCLEILEKGELQVAGKERESQFSSQFRDIATIVMQ 987
            NVSKG+LAKSKDL AAFG + DQ+++ LEIL+KGELQVAGKERESQ SSQFRDIATIVMQ
Sbjct: 61   NVSKGVLAKSKDLEAAFGKERDQTEILLEILDKGELQVAGKERESQLSSQFRDIATIVMQ 120

Query: 986  KTFNPETQRPYTISMIERLMHDIHFAVDPNSSSKKQALEVIRELQKLYPIKRSPMRLRLT 807
            KT NPETQRPYT SMIERLMH+IHF+VDPNSSSKKQALEVIRELQK +PIKR PMRLRLT
Sbjct: 121  KTINPETQRPYTSSMIERLMHEIHFSVDPNSSSKKQALEVIRELQKHFPIKRCPMRLRLT 180

Query: 806  VPEQNMPSLLEKINGWNCNIVSKDESGSQLSVICELEPSLFRDCDAFVRNMQGRLDILAV 627
            VP+QN  SLLEK+N WN +IVSKDESG QLS+ICE+EP +FRDCDA VRN+QGRL+ILAV
Sbjct: 181  VPQQNFSSLLEKLNVWNASIVSKDESGGQLSIICEMEPGIFRDCDALVRNLQGRLEILAV 240

Query: 626  NVHMDSDTQVDHFDDLEDERSNMEKSSAVAAAQLSEKLQKHATIXXXXXXXXSQGEAKLQ 447
            ++HM+ DT VD +DD E   S + K SA    QLSEK+Q+            ++GE K  
Sbjct: 241  SLHMEGDTHVDDYDDHEHVPSRLPKESADPVLQLSEKVQRQT---ISVGSSSTEGEVKQN 297

Query: 446  KCSTCNAFVGDAKEYRAHFKSEWHKHNLRRKTRQLPPLTAEECMADLDLGDSKADLKDYS 267
            KCSTC+AFVGD+K+YR HFKSEWHKHNL RKTRQLPPL+AEEC+ D+++ D KADLKDYS
Sbjct: 298  KCSTCDAFVGDSKQYREHFKSEWHKHNLGRKTRQLPPLSAEECLTDMEMNDLKADLKDYS 357

Query: 266  F 264
            F
Sbjct: 358  F 358


>ref|NP_564488.1| sequence-specific DNA binding transcription factor [Arabidopsis
            thaliana] gi|7523664|gb|AAF63104.1|AC006423_5 Unknown
            protein [Arabidopsis thaliana] gi|15450898|gb|AAK96720.1|
            Unknown protein [Arabidopsis thaliana]
            gi|30725592|gb|AAP37818.1| At1g43860 [Arabidopsis
            thaliana] gi|332193881|gb|AEE32002.1| sequence-specific
            DNA binding transcription factor [Arabidopsis thaliana]
          Length = 370

 Score =  525 bits (1352), Expect = e-146
 Identities = 258/370 (69%), Positives = 307/370 (82%), Gaps = 10/370 (2%)
 Frame = -3

Query: 1343 MSKTLVQPVGQKRLTNVAVVRLKKHGNRFEIACYKNKVLSWRSHVEKDLDEVLQSQTVYS 1164
            MSKTLVQPVGQKRLTNVAVVRLKK GNRFEIACYKNKVLSWRS VEKD+DEVLQS TVYS
Sbjct: 1    MSKTLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYS 60

Query: 1163 NVSKGILAKSKDLVAAFGTDDQSKVCLEILEKGELQVAGKERESQFSSQFRDIATIVMQK 984
            NVSKG+LAKSKDL+ +FG+DD +K+C++ILEKGELQVAGKERESQFSSQFRDIATIVMQK
Sbjct: 61   NVSKGVLAKSKDLMKSFGSDDHTKICIDILEKGELQVAGKERESQFSSQFRDIATIVMQK 120

Query: 983  TFNPETQRPYTISMIERLMHDIHFAVDPNSSSKKQALEVIRELQKLYPIKRSPMRLRLTV 804
            T NPETQRPYTISM+ERLMH+IHFAVDP+S+SKKQAL+VIRELQK +PIKRSPMRLRLTV
Sbjct: 121  TINPETQRPYTISMVERLMHEIHFAVDPHSNSKKQALDVIRELQKHFPIKRSPMRLRLTV 180

Query: 803  PEQNMPSLLEKINGWNCNIVSKDESGSQLSVICELEPSLFRDCDAFVRNMQGRLDILAVN 624
            P QN PSLLEK+  W+ ++VSKDESG+Q+S +CE+EP LFR+CD+ VR++QGRL+ILAV+
Sbjct: 181  PVQNFPSLLEKLKEWDGSVVSKDESGTQMSTVCEMEPGLFRECDSHVRSIQGRLEILAVS 240

Query: 623  VHMDSDTQVDHFDDLEDERSNMEKSSAVA----------AAQLSEKLQKHATIXXXXXXX 474
            VH + DT +DH+D+ +D      K    A            +LS+KLQK           
Sbjct: 241  VHAEGDTSMDHYDEHDDMALQTHKPLLPAETETKDLTDPVVELSKKLQKQEISTTDNIKQ 300

Query: 473  XSQGEAKLQKCSTCNAFVGDAKEYRAHFKSEWHKHNLRRKTRQLPPLTAEECMADLDLGD 294
                E K  KCSTCN FVG+AK+YR H KS+WHKHNL+RKTR+LPP++A+ECM+++D+ D
Sbjct: 301  EGGEEKKGTKCSTCNTFVGEAKQYREHCKSDWHKHNLKRKTRKLPPISADECMSEIDMDD 360

Query: 293  SKADLKDYSF 264
            S+ADLKDYSF
Sbjct: 361  SRADLKDYSF 370


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