BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00006888
         (1428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]   603   e-170
ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containi...   598   e-168
ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containi...   587   e-165
ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containi...   587   e-165
ref|XP_002883344.1| pentatricopeptide repeat-containing protein ...   563   e-158

>emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  603 bits (1554), Expect = e-170
 Identities = 298/483 (61%), Positives = 368/483 (76%), Gaps = 10/483 (2%)
 Frame = +1

Query: 7    LFDAIPEPTTVVWNTLMIGHICNNMPHEAISLYSRLFCAVNSSDDRKCDAYTYSSVLKAC 186
            LFD+IP PTTV+WNT++IG ICNNMP +A+  Y+R+     +S   K D+YT+SS LKAC
Sbjct: 59   LFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARM----RASPSPKFDSYTFSSTLKAC 114

Query: 187  ADTKQLSIGKAVHCHVLRSGLYTSRIVHNSLLNMYTTCLLR----------SGCDLVKRV 336
            A  + L +GKA+HCHVLRS   +SRIV+NSLLNMY+TCL            + CDLV+RV
Sbjct: 115  AQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRV 174

Query: 337  FRTMRRRNVVSWNIMIAWYAKTGRYSEAVRHLEMMKRAGFTPSVVSFVNLFPAVSGLGDI 516
            F TMR+RNVV+WN MI+WY KT R  EA +    M R G  P+ VSFVN+FPAV  + D 
Sbjct: 175  FDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMNDY 234

Query: 517  DIANVVYGMVTKLGDDYVNDLFVVSSAITMYAELGCVDFARQIFDNCFKKNAHVWNTMIG 696
            D ANV+YG+V KLG DYV+D FVVSSAI MYAELGCVDFAR+IFD C ++N  VWNTMIG
Sbjct: 235  DNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIG 294

Query: 697  GYVQNNHPIAAIELFIMALEAQDGGNVDDVTFLSALSAASELQQLNVAQQLHSYLIKKSL 876
            GYVQNN PI AI+LF+  +E++    +DDVTFLSAL+A S+LQ L++ +QLH+Y++K S 
Sbjct: 295  GYVQNNCPIEAIDLFVQVMESEQFX-LDDVTFLSALTAISQLQWLDLGRQLHAYILKSST 353

Query: 877  VSSVILLNAVIALYSRCNFIGDSFKVFSEMQERDVVSWNTMICALVQNGLDDEGLMLVYE 1056
            +  V++LNA+I +YSRC  IG SFKVFS M ERDVV+WNTM+ A VQNGLDDEGLMLV+E
Sbjct: 354  ILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFE 413

Query: 1057 MQKLGVSVDDVTIAAILSAASNLRNREVGKQTHGYLIRHGIEFNGMDNYLIDMYAKSGLI 1236
            MQK G  VD VT+ A+LS ASNLR++E+GKQ H YLIRHGI+F GMD YLIDMYAKSGLI
Sbjct: 414  MQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDGYLIDMYAKSGLI 473

Query: 1237 EAAETIFKRNCKAGSDLALWNAMISGNTQNGLIEESLTIFRQMLEGNATPNAVTLASVLP 1416
              A+ +F++N     D A WNAMI+G TQNGL EE   +FR+M+E N  PNAVTLAS+LP
Sbjct: 474  TTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILP 533

Query: 1417 ACS 1425
            AC+
Sbjct: 534  ACN 536



 Score =  177 bits (449), Expect = 6e-42
 Identities = 124/461 (26%), Positives = 219/461 (47%), Gaps = 4/461 (0%)
 Frame = +1

Query: 1    RQLFDAIPEPTTVVWNTLMIGHICNNMPHEAISLYSRLFCAVNSSDDRKCDAYTYSSVLK 180
            R++FD   E  T VWNT++ G++ NN P EAI L    F  V  S+    D  T+ S L 
Sbjct: 275  REIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDL----FVQVMESEQFXLDDVTFLSALT 330

Query: 181  ACADTKQLSIGKAVHCHVLRSGLYTSRIVHNSLLNMYTTCLLRSGCDLVKRVFRTMRRRN 360
            A +  + L +G+ +H ++L+S      ++ N+++ MY+ C          +VF  M  R+
Sbjct: 331  AISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRC---GSIGTSFKVFSNMLERD 387

Query: 361  VVSWNIMIAWYAKTGRYSEAVRHLEMMKRAGFTPSVVSFVNLFPAVSGLGDIDIANVVYG 540
            VV+WN M++ + + G   E +  +  M++ GF    V+   L    S L   +I    + 
Sbjct: 388  VVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHA 447

Query: 541  MVTKLGDDYVNDLFVVSSAITMYAELGCVDFARQIFD--NCFKKNAHVWNTMIGGYVQNN 714
             + + G  +     +    I MYA+ G +  A+Q+F+  + + ++   WN MI GY QN 
Sbjct: 448  YLIRHGIQFEG---MDGYLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNG 504

Query: 715  HPIAAIELFIMALEAQDGGNVDDVTFLSALSAASELQQLNVAQQLHSYLIKKSLVSSVIL 894
                   +F   +E     N   VT  S L A + +  + + +Q+H + I+  L  +V +
Sbjct: 505  LSEEGFAVFRKMIEQNVRPNA--VTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFV 562

Query: 895  LNAVIALYSRCNFIGDSFKVFSEMQERDVVSWNTMICALVQNGLDDEGLMLVYEMQKLGV 1074
              A++ +YS+   I  +  VF+E  E++ V++ TMI +  Q+G+ +  L L + M   G+
Sbjct: 563  GTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGI 622

Query: 1075 SVDDVTIAAILSAASNLRNREVGKQTHGYLIRHGIEFNGMDNY--LIDMYAKSGLIEAAE 1248
              D VT  AILSA S     + G +    + R        ++Y  + DM  + G +  A 
Sbjct: 623  KPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSSEHYCCVADMLGRVGRVXEAY 682

Query: 1249 TIFKRNCKAGSDLALWNAMISGNTQNGLIEESLTIFRQMLE 1371
               K   + G+   +W +++     +G  E    +  ++LE
Sbjct: 683  EFVKGLGEEGNTFRIWGSLLGACRIHGEFELGKVVANKLLE 723



 Score =  174 bits (442), Expect = 4e-41
 Identities = 129/482 (26%), Positives = 232/482 (48%), Gaps = 7/482 (1%)
 Frame = +1

Query: 1    RQLFDAIPEPTTVVWNTLMIGHICNNMPHEAISLYSRLFCAVNSSDDRKCDAYTYSSVLK 180
            R++FD + +   V WNT++  ++      EA  ++  +          +    ++ +V  
Sbjct: 172  RRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRM-----GIRPTPVSFVNVFP 226

Query: 181  ACADTKQLSIGKAVHCHVLRSG--LYTSRIVHNSLLNMYTTCLLRSGC-DLVKRVFRTMR 351
            A            ++  V++ G        V +S + MY       GC D  + +F    
Sbjct: 227  AVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAEL----GCVDFAREIFDCCL 282

Query: 352  RRNVVSWNIMIAWYAKTGRYSEAVR-HLEMMKRAGFTPSVVSFVNLFPAVSGLGDIDIAN 528
             RN   WN MI  Y +     EA+   +++M+   F    V+F++   A+S L  +D+  
Sbjct: 283  ERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGR 342

Query: 529  VVYGMVTKLGDDYVNDLFVVSSAITMYAELGCVDFARQIFDNCFKKNAHVWNTMIGGYVQ 708
             ++  + K     +  + ++++ I MY+  G +  + ++F N  +++   WNTM+  +VQ
Sbjct: 343  QLHAYILK--SSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQ 400

Query: 709  NNHPIAAIELFIMALEAQDGGNVDDVTFLSALSAASELQQLNVAQQLHSYLIKKSLVSSV 888
            N      + L +  ++ Q G  VD VT  + LS AS L+   + +Q H+YLI+  +    
Sbjct: 401  NGLDDEGLML-VFEMQKQ-GFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEG 458

Query: 889  ILLNAVIALYSRCNFIGDSFKVFSEMQ--ERDVVSWNTMICALVQNGLDDEGLMLVYEMQ 1062
             +   +I +Y++   I  + ++F +    +RD  +WN MI    QNGL +EG  +  +M 
Sbjct: 459  -MDGYLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMI 517

Query: 1063 KLGVSVDDVTIAAILSAASNLRNREVGKQTHGYLIRHGIEFNG-MDNYLIDMYAKSGLIE 1239
            +  V  + VT+A+IL A + +    +GKQ HG+ IR  +  N  +   L+DMY+KSG I 
Sbjct: 518  EQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAIT 577

Query: 1240 AAETIFKRNCKAGSDLALWNAMISGNTQNGLIEESLTIFRQMLEGNATPNAVTLASVLPA 1419
             AE +F    +  S    +  MI    Q+G+ E +L++F  ML     P++VT  ++L A
Sbjct: 578  YAENVFAETLEKNS--VTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSA 635

Query: 1420 CS 1425
            CS
Sbjct: 636  CS 637



 Score =  118 bits (296), Expect = 3e-24
 Identities = 80/284 (28%), Positives = 143/284 (50%), Gaps = 19/284 (6%)
 Frame = +1

Query: 634  ARQIFDNCFKKNAHVWNTMIGGYVQNNHPIAAIELFIMALEAQDGGNVDDVTFLSALSAA 813
            A  +FD+  +    +WNT+I G++ NN PI A+ LF   + A      D  TF S L A 
Sbjct: 56   ALHLFDSIPRPTTVLWNTIIIGFICNNMPIDAL-LFYARMRASPSPKFDSYTFSSTLKAC 114

Query: 814  SELQQLNVAQQLHSYLIKKSLVSSVILLNAVIALYSRC----NFIGDSF---------KV 954
            ++ + L + + LH ++++    SS I+ N+++ +YS C     ++G ++         +V
Sbjct: 115  AQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRV 174

Query: 955  FSEMQERDVVSWNTMICALVQNGLDDEGLMLVYEMQKLGVSVDDVTIAAILSAASNLRNR 1134
            F  M++R+VV+WNTMI   V+     E   +   M ++G+    V+   +  A   + + 
Sbjct: 175  FDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMNDY 234

Query: 1135 EVGKQTHGYLIRHGIEFNGMDNYL-----IDMYAKSGLIEAAETIFKRNCKAGSDLALWN 1299
            +     +G +++ G ++  +D++      I MYA+ G ++ A  IF  +C    +  +WN
Sbjct: 235  DNANVLYGLVVKLGSDY--VDDFFVVSSAIFMYAELGCVDFAREIF--DCCLERNTEVWN 290

Query: 1300 AMISGNTQNGLIEESLTIFRQMLEGNATP-NAVTLASVLPACSQ 1428
             MI G  QN    E++ +F Q++E      + VT  S L A SQ
Sbjct: 291  TMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQ 334


>ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
            chloroplastic [Vitis vinifera]
          Length = 825

 Score =  598 bits (1542), Expect = e-168
 Identities = 296/483 (61%), Positives = 367/483 (75%), Gaps = 10/483 (2%)
 Frame = +1

Query: 7    LFDAIPEPTTVVWNTLMIGHICNNMPHEAISLYSRLFCAVNSSDDRKCDAYTYSSVLKAC 186
            LFD+IP PTTV+WNT++IG ICNNMP +A+  Y+R+     +S   K D+YT+SS LKAC
Sbjct: 59   LFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARM----RASPSPKFDSYTFSSTLKAC 114

Query: 187  ADTKQLSIGKAVHCHVLRSGLYTSRIVHNSLLNMYTTCLLR----------SGCDLVKRV 336
            A  + L +GKA+HCHVLRS   +SRIV+NSLLNMY+TCL            + CDLV+RV
Sbjct: 115  AQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRV 174

Query: 337  FRTMRRRNVVSWNIMIAWYAKTGRYSEAVRHLEMMKRAGFTPSVVSFVNLFPAVSGLGDI 516
            F TMR+RNVV+WN MI+WY KT R  EA +    M R G  P+ VSFVN+FPAV  + D 
Sbjct: 175  FDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMSDY 234

Query: 517  DIANVVYGMVTKLGDDYVNDLFVVSSAITMYAELGCVDFARQIFDNCFKKNAHVWNTMIG 696
            D ANV+YG+V KLG D+V+D FVVSSAI MYAELGCVDFAR+IFD C ++N  VWNTMIG
Sbjct: 235  DNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIG 294

Query: 697  GYVQNNHPIAAIELFIMALEAQDGGNVDDVTFLSALSAASELQQLNVAQQLHSYLIKKSL 876
            GYVQNN PI AI+LF+  +E++    +DDVTFLSAL+A S+LQ L + +QLH+Y++K S 
Sbjct: 295  GYVQNNCPIEAIDLFVQVMESEQFV-LDDVTFLSALTAISQLQWLELGRQLHAYILKSST 353

Query: 877  VSSVILLNAVIALYSRCNFIGDSFKVFSEMQERDVVSWNTMICALVQNGLDDEGLMLVYE 1056
            +  V++LNA+I +YSRC  IG SFKVFS M ERDVV+WNTM+ A VQNGLDDEGLMLV+ 
Sbjct: 354  ILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFA 413

Query: 1057 MQKLGVSVDDVTIAAILSAASNLRNREVGKQTHGYLIRHGIEFNGMDNYLIDMYAKSGLI 1236
            MQK G  VD VT+ A+LS ASNLR++E+GKQ H YLIRHGI+F GMD+YLIDMYAKSGLI
Sbjct: 414  MQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDSYLIDMYAKSGLI 473

Query: 1237 EAAETIFKRNCKAGSDLALWNAMISGNTQNGLIEESLTIFRQMLEGNATPNAVTLASVLP 1416
              A+ +F++N     D A WNAMI+G TQNGL EE   +FR+M+E N  PNAVTLAS+LP
Sbjct: 474  TTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILP 533

Query: 1417 ACS 1425
            AC+
Sbjct: 534  ACN 536



 Score =  179 bits (454), Expect = 2e-42
 Identities = 133/481 (27%), Positives = 234/481 (48%), Gaps = 6/481 (1%)
 Frame = +1

Query: 1    RQLFDAIPEPTTVVWNTLMIGHICNNMPHEAISLYSRLFCAVNSSDDRKCDAYTYSSVLK 180
            R++FD + +   V WNT++  ++      EA  ++ R    +            + +V +
Sbjct: 172  RRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMF-RTMMRMGIRPTPVSFVNVFPAVWR 230

Query: 181  ACA-DTKQLSIGKAVHCHVLRSGLYTSRIVHNSLLNMYTTCLLRSGC-DLVKRVFRTMRR 354
                D   +  G  V    L S       V +S + MY       GC D  + +F     
Sbjct: 231  MSDYDNANVLYGLVVK---LGSDFVDDFFVVSSAIFMYAEL----GCVDFAREIFDCCLE 283

Query: 355  RNVVSWNIMIAWYAKTGRYSEAVR-HLEMMKRAGFTPSVVSFVNLFPAVSGLGDIDIANV 531
            RN   WN MI  Y +     EA+   +++M+   F    V+F++   A+S L  +++   
Sbjct: 284  RNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQ 343

Query: 532  VYGMVTKLGDDYVNDLFVVSSAITMYAELGCVDFARQIFDNCFKKNAHVWNTMIGGYVQN 711
            ++  + K     +  + ++++ I MY+  G +  + ++F N  +++   WNTM+  +VQN
Sbjct: 344  LHAYILK--SSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQN 401

Query: 712  NHPIAAIELFIMALEAQDGGNVDDVTFLSALSAASELQQLNVAQQLHSYLIKKSLVSSVI 891
                  + L + A++ Q G  VD VT  + LS AS L+   + +Q H+YLI+  +     
Sbjct: 402  GLDDEGLML-VFAMQKQ-GFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEG- 458

Query: 892  LLNAVIALYSRCNFIGDSFKVFSEMQE--RDVVSWNTMICALVQNGLDDEGLMLVYEMQK 1065
            + + +I +Y++   I  + ++F +  +  RD  +WN MI    QNGL +EG  +  +M +
Sbjct: 459  MDSYLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIE 518

Query: 1066 LGVSVDDVTIAAILSAASNLRNREVGKQTHGYLIRHGIEFNG-MDNYLIDMYAKSGLIEA 1242
              V  + VT+A+IL A + +    +GKQ HG+ IR  +  N  +   L+DMY+KSG I  
Sbjct: 519  QNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITY 578

Query: 1243 AETIFKRNCKAGSDLALWNAMISGNTQNGLIEESLTIFRQMLEGNATPNAVTLASVLPAC 1422
            AE +F    +  S    +  MIS   Q+G+ E +L++F  ML     P++VT  ++L AC
Sbjct: 579  AENVFAETLEKNS--VTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSAC 636

Query: 1423 S 1425
            S
Sbjct: 637  S 637



 Score =  177 bits (450), Expect = 5e-42
 Identities = 125/461 (27%), Positives = 220/461 (47%), Gaps = 4/461 (0%)
 Frame = +1

Query: 1    RQLFDAIPEPTTVVWNTLMIGHICNNMPHEAISLYSRLFCAVNSSDDRKCDAYTYSSVLK 180
            R++FD   E  T VWNT++ G++ NN P EAI L    F  V  S+    D  T+ S L 
Sbjct: 275  REIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDL----FVQVMESEQFVLDDVTFLSALT 330

Query: 181  ACADTKQLSIGKAVHCHVLRSGLYTSRIVHNSLLNMYTTCLLRSGCDLVKRVFRTMRRRN 360
            A +  + L +G+ +H ++L+S      ++ N+++ MY+ C          +VF  M  R+
Sbjct: 331  AISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRC---GSIGTSFKVFSNMLERD 387

Query: 361  VVSWNIMIAWYAKTGRYSEAVRHLEMMKRAGFTPSVVSFVNLFPAVSGLGDIDIANVVYG 540
            VV+WN M++ + + G   E +  +  M++ GF    V+   L    S L   +I    + 
Sbjct: 388  VVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHA 447

Query: 541  MVTKLGDDYVNDLFVVSSAITMYAELGCVDFARQIFD--NCFKKNAHVWNTMIGGYVQNN 714
             + + G  +     + S  I MYA+ G +  A+Q+F+  + + ++   WN MI GY QN 
Sbjct: 448  YLIRHGIQFEG---MDSYLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNG 504

Query: 715  HPIAAIELFIMALEAQDGGNVDDVTFLSALSAASELQQLNVAQQLHSYLIKKSLVSSVIL 894
                   +F   +E     N   VT  S L A + +  + + +Q+H + I+  L  +V +
Sbjct: 505  LSEEGFAVFRKMIEQNVRPNA--VTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFV 562

Query: 895  LNAVIALYSRCNFIGDSFKVFSEMQERDVVSWNTMICALVQNGLDDEGLMLVYEMQKLGV 1074
              A++ +YS+   I  +  VF+E  E++ V++ TMI +  Q+G+ +  L L + M   G+
Sbjct: 563  GTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGI 622

Query: 1075 SVDDVTIAAILSAASNLRNREVGKQTHGYLIRHGIEFNGMDNY--LIDMYAKSGLIEAAE 1248
              D VT  AILSA S     + G +    + R        ++Y  + DM  + G +  A 
Sbjct: 623  KPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSAEHYCCVADMLGRVGRVVEAY 682

Query: 1249 TIFKRNCKAGSDLALWNAMISGNTQNGLIEESLTIFRQMLE 1371
               K   + G+   +W +++     +G  E    +  ++LE
Sbjct: 683  EFVKGLGEEGNTFGIWGSLLGACRIHGEFELGKVVANKLLE 723



 Score =  119 bits (298), Expect = 2e-24
 Identities = 81/284 (28%), Positives = 143/284 (50%), Gaps = 19/284 (6%)
 Frame = +1

Query: 634  ARQIFDNCFKKNAHVWNTMIGGYVQNNHPIAAIELFIMALEAQDGGNVDDVTFLSALSAA 813
            A  +FD+  +    +WNT+I G++ NN PI A+ LF   + A      D  TF S L A 
Sbjct: 56   ALHLFDSIPRPTTVLWNTIIIGFICNNMPIDAL-LFYARMRASPSPKFDSYTFSSTLKAC 114

Query: 814  SELQQLNVAQQLHSYLIKKSLVSSVILLNAVIALYSRC----NFIGDSF---------KV 954
            ++ + L + + LH ++++    SS I+ N+++ +YS C     ++G ++         +V
Sbjct: 115  AQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRV 174

Query: 955  FSEMQERDVVSWNTMICALVQNGLDDEGLMLVYEMQKLGVSVDDVTIAAILSAASNLRNR 1134
            F  M++R+VV+WNTMI   V+     E   +   M ++G+    V+   +  A   + + 
Sbjct: 175  FDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMSDY 234

Query: 1135 EVGKQTHGYLIRHGIEFNGMDNYL-----IDMYAKSGLIEAAETIFKRNCKAGSDLALWN 1299
            +     +G +++ G +F  +D++      I MYA+ G ++ A  IF  +C    +  +WN
Sbjct: 235  DNANVLYGLVVKLGSDF--VDDFFVVSSAIFMYAELGCVDFAREIF--DCCLERNTEVWN 290

Query: 1300 AMISGNTQNGLIEESLTIFRQMLEGNA-TPNAVTLASVLPACSQ 1428
             MI G  QN    E++ +F Q++E      + VT  S L A SQ
Sbjct: 291  TMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQ 334


>ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
            chloroplastic-like [Cucumis sativus]
          Length = 817

 Score =  587 bits (1512), Expect = e-165
 Identities = 286/485 (58%), Positives = 370/485 (76%), Gaps = 10/485 (2%)
 Frame = +1

Query: 1    RQLFDAIPEPTTVVWNTLMIGHICNNMPHEAISLYSRLFCAVNSSDDRKCDAYTYSSVLK 180
            RQLFDA+P P+TV+WNT++IG +CNN P EA+  YS +    +SS   KCD+YTYSSVLK
Sbjct: 48   RQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNM---KSSSPQVKCDSYTYSSVLK 104

Query: 181  ACADTKQLSIGKAVHCHVLRSGLYTSRIVHNSLLNMYTTCLLR----------SGCDLVK 330
            ACADT+ L +GKAVH H LR  +  SRIV+NSLLNMY+ C             S CDLV+
Sbjct: 105  ACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVR 164

Query: 331  RVFRTMRRRNVVSWNIMIAWYAKTGRYSEAVRHLEMMKRAGFTPSVVSFVNLFPAVSGLG 510
            +VF TMR+R VV+WN +IAWY +T RY+EAV+   MM + G  PS VSFVN+FPA S LG
Sbjct: 165  KVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLG 224

Query: 511  DIDIANVVYGMVTKLGDDYVNDLFVVSSAITMYAELGCVDFARQIFDNCFKKNAHVWNTM 690
            D   ANVV+GM+ KLG +YVNDL+VVSSAI MYAELGC++FA+++FDNC ++N  VWNTM
Sbjct: 225  DFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTM 284

Query: 691  IGGYVQNNHPIAAIELFIMALEAQDGGNVDDVTFLSALSAASELQQLNVAQQLHSYLIKK 870
            I  +VQNN  +  I+LF  A+E++D   +D+VT LSA+SAAS LQ+  +A+QLH+++IK 
Sbjct: 285  ISAFVQNNFSLEGIQLFFQAVESEDAA-IDEVTLLSAISAASHLQKFELAEQLHAFVIKN 343

Query: 871  SLVSSVILLNAVIALYSRCNFIGDSFKVFSEMQERDVVSWNTMICALVQNGLDDEGLMLV 1050
              V+ V ++NA+IA+YSRCN I  SFK+F  M E+DVVSWNTMI A VQNGL+DE LML 
Sbjct: 344  VAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLF 403

Query: 1051 YEMQKLGVSVDDVTIAAILSAASNLRNREVGKQTHGYLIRHGIEFNGMDNYLIDMYAKSG 1230
            YEM+K  + VD VT+ A+LSAAS+LRN ++GKQTHGYL+R+GI+F GMD+YLIDMYAKSG
Sbjct: 404  YEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSG 463

Query: 1231 LIEAAETIFKRNCKAGSDLALWNAMISGNTQNGLIEESLTIFRQMLEGNATPNAVTLASV 1410
            LIEAA+ +F+++     D A WN+M+SG TQNGL++++  I RQML+    PN VTLAS+
Sbjct: 464  LIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASI 523

Query: 1411 LPACS 1425
            LPAC+
Sbjct: 524  LPACN 528



 Score =  187 bits (476), Expect = 4e-45
 Identities = 146/483 (30%), Positives = 248/483 (51%), Gaps = 8/483 (1%)
 Frame = +1

Query: 1    RQLFDAIPEPTTVVWNTLMIGHICNNMPHEAISLYSRLFCAVNSSDDRKCDAYTYSSVLK 180
            R++FD + + T V WNTL+  ++      EA+  +S +          K    ++ +V  
Sbjct: 164  RKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMM-----KIGIKPSPVSFVNVFP 218

Query: 181  ACADTKQLSIGKAVHCHVLRSGL-YTSRI-VHNSLLNMYTTCLLRSGC-DLVKRVFRTMR 351
            A +          VH  +++ G  Y + + V +S + MY       GC +  K+VF    
Sbjct: 219  AFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAEL----GCLEFAKKVFDNCL 274

Query: 352  RRNVVSWNIMIAWYAKTGRYSEAVR-HLEMMKRAGFTPSVVSFVNLFPAVSGLGDIDIAN 528
             RN   WN MI+ + +     E ++   + ++        V+ ++   A S L   ++A 
Sbjct: 275  ERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAE 334

Query: 529  VVYGMVTKLGDDYVNDLFVVSSAITMYAELGCVDFARQIFDNCFKKNAHVWNTMIGGYVQ 708
             ++  V K  +  V  + V+++ I MY+    +D + +IFDN  +K+   WNTMI  +VQ
Sbjct: 335  QLHAFVIK--NVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQ 392

Query: 709  NNHPIAAIELFIMALEAQDGGNVDDVTFLSALSAASELQQLNVAQQLHSYLIKKSLVSSV 888
            N     A+ LF   ++ QD   VD VT  + LSAAS+L+  ++ +Q H YL++  +    
Sbjct: 393  NGLNDEALMLFY-EMKKQDL-MVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEG 450

Query: 889  ILLNAVIALYSRCNFIGDSFKVFSEM--QERDVVSWNTMICALVQNGLDDEGLMLVYEMQ 1062
             + + +I +Y++   I  +  VF +    ERD  +WN+M+    QNGL D+  +++ +M 
Sbjct: 451  -MDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQML 509

Query: 1063 KLGVSVDDVTIAAILSAASNLRNREVGKQTHGYLIRHGIEFNG-MDNYLIDMYAKSGLIE 1239
               V  + VT+A+IL A +     + GKQ HG+ IR+ ++ N  +   LIDMY+KSG I 
Sbjct: 510  DQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIA 569

Query: 1240 AAETIF-KRNCKAGSDLALWNAMISGNTQNGLIEESLTIFRQMLEGNATPNAVTLASVLP 1416
             AE +F K N K+   +  ++ MI G  Q+G+ E +L +F +M +    P+AVTL +VL 
Sbjct: 570  HAENVFSKANEKS---IVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLS 626

Query: 1417 ACS 1425
            ACS
Sbjct: 627  ACS 629



 Score =  177 bits (448), Expect = 8e-42
 Identities = 128/464 (27%), Positives = 226/464 (48%), Gaps = 7/464 (1%)
 Frame = +1

Query: 1    RQLFDAIPEPTTVVWNTLMIGHICNNMPHEAISLYSRLFCAVNSSDDRKCDAYTYSSVLK 180
            +++FD   E  T VWNT++   + NN   E I L+   F AV S +D   D  T  S + 
Sbjct: 267  KKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLF---FQAVES-EDAAIDEVTLLSAIS 322

Query: 181  ACADTKQLSIGKAVHCHVLRSGLYTSRIVHNSLLNMYTTCLLRSGCDLVKRVFRTMRRRN 360
            A +  ++  + + +H  V+++   T   V N+L+ MY+ C   +  D   ++F  M  ++
Sbjct: 323  AASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRC---NSIDTSFKIFDNMPEKD 379

Query: 361  VVSWNIMIAWYAKTGRYSEAVRHLEMMKRAGFTPSVVSFVNLFPAVSGLGDIDIANVVYG 540
            VVSWN MI+ + + G   EA+     MK+       V+   L  A S L + DI    +G
Sbjct: 380  VVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHG 439

Query: 541  MVTKLGDDYVNDLFVVSSAITMYAELGCVDFARQIFDNCF--KKNAHVWNTMIGGYVQNN 714
             + + G  +     + S  I MYA+ G ++ A+ +F+  F  +++   WN+M+ GY QN 
Sbjct: 440  YLLRNGIQFEG---MDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNG 496

Query: 715  HPIAAIELFIMALEAQDGGNVDDVTFLSALSAASELQQLNVAQQLHSYLIKKSLVSSVIL 894
                A  +    L+ +   NV  VT  S L A +    ++  +QLH + I+  L  +V +
Sbjct: 497  LVDQAFLILRQMLDQKVMPNV--VTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFV 554

Query: 895  LNAVIALYSRCNFIGDSFKVFSEMQERDVVSWNTMICALVQNGLDDEGLMLVYEMQKLGV 1074
              A+I +YS+   I  +  VFS+  E+ +V+++TMI    Q+G+ +  L + + MQK G+
Sbjct: 555  ATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGI 614

Query: 1075 SVDDVTIAAILSAASNLRNREVGKQTHG-----YLIRHGIEFNGMDNYLIDMYAKSGLIE 1239
              D VT+ A+LSA S     + G Q        Y I+   E       + DM  ++G ++
Sbjct: 615  QPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCC---VADMLGRAGRVD 671

Query: 1240 AAETIFKRNCKAGSDLALWNAMISGNTQNGLIEESLTIFRQMLE 1371
             A        + G+ + +W ++++    +   E    + +++LE
Sbjct: 672  KAYEFVIGLGEKGNVMEIWGSLLAACRIHKQFELGKLVAKKLLE 715



 Score =  115 bits (288), Expect = 3e-23
 Identities = 84/287 (29%), Positives = 140/287 (48%), Gaps = 18/287 (6%)
 Frame = +1

Query: 619  GCVDFARQIFDNCFKKNAHVWNTMIGGYVQNNHPIAAIELFIMALEAQDGGNVDDVTFLS 798
            G +  ARQ+FD   + +  +WNT+I G V NN P  A+  +     +      D  T+ S
Sbjct: 42   GQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSS 101

Query: 799  ALSAASELQQLNVAQQLHSYLIKKSLVSSVILLNAVIALYSRCNFIGDS----------- 945
             L A ++ + L V + +H++ ++  +  S I+ N+++ +YS C+                
Sbjct: 102  VLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCD 161

Query: 946  --FKVFSEMQERDVVSWNTMICALVQNGLDDEGLMLVYEMQKLGVSVDDVTIAAILSAAS 1119
               KVF  M++R VV+WNT+I   V+     E +     M K+G+    V+   +  A S
Sbjct: 162  LVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFS 221

Query: 1120 NLRNREVGKQTHGYLIRHGIEFNGMDNYLID----MYAKSGLIEAAETIFKRNCKAGSDL 1287
            +L + +     HG L++ G E+   D Y++     MYA+ G +E A+ +F  NC    + 
Sbjct: 222  SLGDFKNANVVHGMLVKLGSEYVN-DLYVVSSAIFMYAELGCLEFAKKVFD-NC-LERNT 278

Query: 1288 ALWNAMISGNTQNGLIEESLTIFRQMLEG-NATPNAVTLASVLPACS 1425
             +WN MIS   QN    E + +F Q +E  +A  + VTL S + A S
Sbjct: 279  EVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAAS 325


>ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
            chloroplastic-like [Cucumis sativus]
          Length = 793

 Score =  587 bits (1512), Expect = e-165
 Identities = 286/485 (58%), Positives = 370/485 (76%), Gaps = 10/485 (2%)
 Frame = +1

Query: 1    RQLFDAIPEPTTVVWNTLMIGHICNNMPHEAISLYSRLFCAVNSSDDRKCDAYTYSSVLK 180
            RQLFDA+P P+TV+WNT++IG +CNN P EA+  YS +    +SS   KCD+YTYSSVLK
Sbjct: 24   RQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNM---KSSSPQVKCDSYTYSSVLK 80

Query: 181  ACADTKQLSIGKAVHCHVLRSGLYTSRIVHNSLLNMYTTCLLR----------SGCDLVK 330
            ACADT+ L +GKAVH H LR  +  SRIV+NSLLNMY+ C             S CDLV+
Sbjct: 81   ACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVR 140

Query: 331  RVFRTMRRRNVVSWNIMIAWYAKTGRYSEAVRHLEMMKRAGFTPSVVSFVNLFPAVSGLG 510
            +VF TMR+R VV+WN +IAWY +T RY+EAV+   MM + G  PS VSFVN+FPA S LG
Sbjct: 141  KVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLG 200

Query: 511  DIDIANVVYGMVTKLGDDYVNDLFVVSSAITMYAELGCVDFARQIFDNCFKKNAHVWNTM 690
            D   ANVV+GM+ KLG +YVNDL+VVSSAI MYAELGC++FA+++FDNC ++N  VWNTM
Sbjct: 201  DFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTM 260

Query: 691  IGGYVQNNHPIAAIELFIMALEAQDGGNVDDVTFLSALSAASELQQLNVAQQLHSYLIKK 870
            I  +VQNN  +  I+LF  A+E++D   +D+VT LSA+SAAS LQ+  +A+QLH+++IK 
Sbjct: 261  ISAFVQNNFSLEGIQLFFQAVESEDAA-IDEVTLLSAISAASHLQKFELAEQLHAFVIKN 319

Query: 871  SLVSSVILLNAVIALYSRCNFIGDSFKVFSEMQERDVVSWNTMICALVQNGLDDEGLMLV 1050
              V+ V ++NA+IA+YSRCN I  SFK+F  M E+DVVSWNTMI A VQNGL+DE LML 
Sbjct: 320  VAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLF 379

Query: 1051 YEMQKLGVSVDDVTIAAILSAASNLRNREVGKQTHGYLIRHGIEFNGMDNYLIDMYAKSG 1230
            YEM+K  + VD VT+ A+LSAAS+LRN ++GKQTHGYL+R+GI+F GMD+YLIDMYAKSG
Sbjct: 380  YEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSG 439

Query: 1231 LIEAAETIFKRNCKAGSDLALWNAMISGNTQNGLIEESLTIFRQMLEGNATPNAVTLASV 1410
            LIEAA+ +F+++     D A WN+M+SG TQNGL++++  I RQML+    PN VTLAS+
Sbjct: 440  LIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASI 499

Query: 1411 LPACS 1425
            LPAC+
Sbjct: 500  LPACN 504



 Score =  187 bits (476), Expect = 4e-45
 Identities = 146/483 (30%), Positives = 248/483 (51%), Gaps = 8/483 (1%)
 Frame = +1

Query: 1    RQLFDAIPEPTTVVWNTLMIGHICNNMPHEAISLYSRLFCAVNSSDDRKCDAYTYSSVLK 180
            R++FD + + T V WNTL+  ++      EA+  +S +          K    ++ +V  
Sbjct: 140  RKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMM-----KIGIKPSPVSFVNVFP 194

Query: 181  ACADTKQLSIGKAVHCHVLRSGL-YTSRI-VHNSLLNMYTTCLLRSGC-DLVKRVFRTMR 351
            A +          VH  +++ G  Y + + V +S + MY       GC +  K+VF    
Sbjct: 195  AFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAEL----GCLEFAKKVFDNCL 250

Query: 352  RRNVVSWNIMIAWYAKTGRYSEAVR-HLEMMKRAGFTPSVVSFVNLFPAVSGLGDIDIAN 528
             RN   WN MI+ + +     E ++   + ++        V+ ++   A S L   ++A 
Sbjct: 251  ERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAE 310

Query: 529  VVYGMVTKLGDDYVNDLFVVSSAITMYAELGCVDFARQIFDNCFKKNAHVWNTMIGGYVQ 708
             ++  V K  +  V  + V+++ I MY+    +D + +IFDN  +K+   WNTMI  +VQ
Sbjct: 311  QLHAFVIK--NVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQ 368

Query: 709  NNHPIAAIELFIMALEAQDGGNVDDVTFLSALSAASELQQLNVAQQLHSYLIKKSLVSSV 888
            N     A+ LF   ++ QD   VD VT  + LSAAS+L+  ++ +Q H YL++  +    
Sbjct: 369  NGLNDEALMLFY-EMKKQDL-MVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEG 426

Query: 889  ILLNAVIALYSRCNFIGDSFKVFSEM--QERDVVSWNTMICALVQNGLDDEGLMLVYEMQ 1062
             + + +I +Y++   I  +  VF +    ERD  +WN+M+    QNGL D+  +++ +M 
Sbjct: 427  -MDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQML 485

Query: 1063 KLGVSVDDVTIAAILSAASNLRNREVGKQTHGYLIRHGIEFNG-MDNYLIDMYAKSGLIE 1239
               V  + VT+A+IL A +     + GKQ HG+ IR+ ++ N  +   LIDMY+KSG I 
Sbjct: 486  DQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIA 545

Query: 1240 AAETIF-KRNCKAGSDLALWNAMISGNTQNGLIEESLTIFRQMLEGNATPNAVTLASVLP 1416
             AE +F K N K+   +  ++ MI G  Q+G+ E +L +F +M +    P+AVTL +VL 
Sbjct: 546  HAENVFSKANEKS---IVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLS 602

Query: 1417 ACS 1425
            ACS
Sbjct: 603  ACS 605



 Score =  177 bits (448), Expect = 8e-42
 Identities = 128/464 (27%), Positives = 226/464 (48%), Gaps = 7/464 (1%)
 Frame = +1

Query: 1    RQLFDAIPEPTTVVWNTLMIGHICNNMPHEAISLYSRLFCAVNSSDDRKCDAYTYSSVLK 180
            +++FD   E  T VWNT++   + NN   E I L+   F AV S +D   D  T  S + 
Sbjct: 243  KKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLF---FQAVES-EDAAIDEVTLLSAIS 298

Query: 181  ACADTKQLSIGKAVHCHVLRSGLYTSRIVHNSLLNMYTTCLLRSGCDLVKRVFRTMRRRN 360
            A +  ++  + + +H  V+++   T   V N+L+ MY+ C   +  D   ++F  M  ++
Sbjct: 299  AASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRC---NSIDTSFKIFDNMPEKD 355

Query: 361  VVSWNIMIAWYAKTGRYSEAVRHLEMMKRAGFTPSVVSFVNLFPAVSGLGDIDIANVVYG 540
            VVSWN MI+ + + G   EA+     MK+       V+   L  A S L + DI    +G
Sbjct: 356  VVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHG 415

Query: 541  MVTKLGDDYVNDLFVVSSAITMYAELGCVDFARQIFDNCF--KKNAHVWNTMIGGYVQNN 714
             + + G  +     + S  I MYA+ G ++ A+ +F+  F  +++   WN+M+ GY QN 
Sbjct: 416  YLLRNGIQFEG---MDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNG 472

Query: 715  HPIAAIELFIMALEAQDGGNVDDVTFLSALSAASELQQLNVAQQLHSYLIKKSLVSSVIL 894
                A  +    L+ +   NV  VT  S L A +    ++  +QLH + I+  L  +V +
Sbjct: 473  LVDQAFLILRQMLDQKVMPNV--VTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFV 530

Query: 895  LNAVIALYSRCNFIGDSFKVFSEMQERDVVSWNTMICALVQNGLDDEGLMLVYEMQKLGV 1074
              A+I +YS+   I  +  VFS+  E+ +V+++TMI    Q+G+ +  L + + MQK G+
Sbjct: 531  ATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGI 590

Query: 1075 SVDDVTIAAILSAASNLRNREVGKQTHG-----YLIRHGIEFNGMDNYLIDMYAKSGLIE 1239
              D VT+ A+LSA S     + G Q        Y I+   E       + DM  ++G ++
Sbjct: 591  QPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCC---VADMLGRAGRVD 647

Query: 1240 AAETIFKRNCKAGSDLALWNAMISGNTQNGLIEESLTIFRQMLE 1371
             A        + G+ + +W ++++    +   E    + +++LE
Sbjct: 648  KAYEFVIGLGEKGNVMEIWGSLLAACRIHKQFELGKLVAKKLLE 691



 Score =  115 bits (288), Expect = 3e-23
 Identities = 84/287 (29%), Positives = 140/287 (48%), Gaps = 18/287 (6%)
 Frame = +1

Query: 619  GCVDFARQIFDNCFKKNAHVWNTMIGGYVQNNHPIAAIELFIMALEAQDGGNVDDVTFLS 798
            G +  ARQ+FD   + +  +WNT+I G V NN P  A+  +     +      D  T+ S
Sbjct: 18   GQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSS 77

Query: 799  ALSAASELQQLNVAQQLHSYLIKKSLVSSVILLNAVIALYSRCNFIGDS----------- 945
             L A ++ + L V + +H++ ++  +  S I+ N+++ +YS C+                
Sbjct: 78   VLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCD 137

Query: 946  --FKVFSEMQERDVVSWNTMICALVQNGLDDEGLMLVYEMQKLGVSVDDVTIAAILSAAS 1119
               KVF  M++R VV+WNT+I   V+     E +     M K+G+    V+   +  A S
Sbjct: 138  LVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFS 197

Query: 1120 NLRNREVGKQTHGYLIRHGIEFNGMDNYLID----MYAKSGLIEAAETIFKRNCKAGSDL 1287
            +L + +     HG L++ G E+   D Y++     MYA+ G +E A+ +F  NC    + 
Sbjct: 198  SLGDFKNANVVHGMLVKLGSEYVN-DLYVVSSAIFMYAELGCLEFAKKVFD-NC-LERNT 254

Query: 1288 ALWNAMISGNTQNGLIEESLTIFRQMLEG-NATPNAVTLASVLPACS 1425
             +WN MIS   QN    E + +F Q +E  +A  + VTL S + A S
Sbjct: 255  EVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAAS 301


>ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297329184|gb|EFH59603.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 824

 Score =  563 bits (1451), Expect = e-158
 Identities = 280/483 (57%), Positives = 365/483 (75%), Gaps = 7/483 (1%)
 Frame = +1

Query: 1    RQLFDAIPEPTTVVWNTLMIGHICNNMPHEAISLYSRLFCAVNSSDDRKCDAYTYSSVLK 180
            RQLFDAIP+PTTV+WNT++IG ICNN+PHEA+  YSR+     ++   KCDAYTYSS LK
Sbjct: 59   RQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRM---KKTAPFTKCDAYTYSSTLK 115

Query: 181  ACADTKQLSIGKAVHCHVLRSGLYTSRIVHNSLLNMYTTCLLRSGC-------DLVKRVF 339
            ACA+TK L  GKAVHCH++R    +SR+VHNSL+NMY +CL   G        D+V++VF
Sbjct: 116  ACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSELDCFEYDVVRKVF 175

Query: 340  RTMRRRNVVSWNIMIAWYAKTGRYSEAVRHLEMMKRAGFTPSVVSFVNLFPAVSGLGDID 519
              MRR+NVV+WN +I+WY KTGR +EA R   +M R    PS VSFVN+FPAV+    I 
Sbjct: 176  DNMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVNVFPAVATSRSIK 235

Query: 520  IANVVYGMVTKLGDDYVNDLFVVSSAITMYAELGCVDFARQIFDNCFKKNAHVWNTMIGG 699
             ANV YG++ KLGD+YV DLFVVSSAI+MYAELG ++ +R++FD+C ++N  VWNTMIG 
Sbjct: 236  KANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVWNTMIGV 295

Query: 700  YVQNNHPIAAIELFIMALEAQDGGNVDDVTFLSALSAASELQQLNVAQQLHSYLIKKSLV 879
            YVQN+  + +IELF+ A+ +++  + D+VTFL A SA S LQQ+ + +Q H ++ K    
Sbjct: 296  YVQNDCLVESIELFLEAIGSKEIVS-DEVTFLLAASAVSGLQQVELGRQFHGFVSKNFRE 354

Query: 880  SSVILLNAVIALYSRCNFIGDSFKVFSEMQERDVVSWNTMICALVQNGLDDEGLMLVYEM 1059
              ++++N+++ +YSRC F+  SF VF  M+ERDVVSWNTMI A VQNGLDDEGLMLVYEM
Sbjct: 355  LPIVIINSLMVMYSRCGFVQKSFGVFHSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEM 414

Query: 1060 QKLGVSVDDVTIAAILSAASNLRNREVGKQTHGYLIRHGIEFNGMDNYLIDMYAKSGLIE 1239
            QK G  +D +T+ A+LSAASNLRN+E+GKQTHG+LIR GI+F GM++YLIDMYAKSGLI 
Sbjct: 415  QKQGFKIDYITVTALLSAASNLRNKEIGKQTHGFLIRQGIQFEGMNSYLIDMYAKSGLIR 474

Query: 1240 AAETIFKRNCKAGSDLALWNAMISGNTQNGLIEESLTIFRQMLEGNATPNAVTLASVLPA 1419
             ++ +F+ +  A  D A WN+MISG TQNG  EE+  +FR+MLE N  PNAVT+AS+LPA
Sbjct: 475  ISQKLFEGSGYAERDQATWNSMISGYTQNGHTEETFLVFRKMLEQNIRPNAVTVASILPA 534

Query: 1420 CSQ 1428
            CSQ
Sbjct: 535  CSQ 537



 Score =  181 bits (460), Expect = 3e-43
 Identities = 134/481 (27%), Positives = 242/481 (50%), Gaps = 6/481 (1%)
 Frame = +1

Query: 1    RQLFDAIPEPTTVVWNTLMIGHICNNMPHEAISLYSRLFCAVNSSDDRKCDAYTYSSVLK 180
            R++FD +     V WNTL+  ++      EA   +     A+    + K    ++ +V  
Sbjct: 172  RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQF-----AIMMRMEIKPSPVSFVNVFP 226

Query: 181  ACADTKQLSIGKAVHCHVLRSG--LYTSRIVHNSLLNMYTTCLLRSGCDLVKRVFRTMRR 354
            A A ++ +      +  +L+ G        V +S ++MY         +  +RVF +   
Sbjct: 227  AVATSRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAEL---GDLESSRRVFDSCVE 283

Query: 355  RNVVSWNIMIAWYAKTGRYSEAVR-HLEMMKRAGFTPSVVSFVNLFPAVSGLGDIDIANV 531
            RN+  WN MI  Y +     E++   LE +         V+F+    AVSGL  +++   
Sbjct: 284  RNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTFLLAASAVSGLQQVELGRQ 343

Query: 532  VYGMVTKLGDDYVNDLFVVSSAITMYAELGCVDFARQIFDNCFKKNAHVWNTMIGGYVQN 711
             +G V+K   +    + +++S + MY+  G V  +  +F +  +++   WNTMI  +VQN
Sbjct: 344  FHGFVSKNFREL--PIVIINSLMVMYSRCGFVQKSFGVFHSMRERDVVSWNTMISAFVQN 401

Query: 712  NHPIAAIELFIMALEAQDGGNVDDVTFLSALSAASELQQLNVAQQLHSYLIKKSLVSSVI 891
                  + L +  ++ Q G  +D +T  + LSAAS L+   + +Q H +LI++ +     
Sbjct: 402  GLDDEGLML-VYEMQKQ-GFKIDYITVTALLSAASNLRNKEIGKQTHGFLIRQGIQFEG- 458

Query: 892  LLNAVIALYSRCNFIGDSFKVF--SEMQERDVVSWNTMICALVQNGLDDEGLMLVYEMQK 1065
            + + +I +Y++   I  S K+F  S   ERD  +WN+MI    QNG  +E  ++  +M +
Sbjct: 459  MNSYLIDMYAKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEETFLVFRKMLE 518

Query: 1066 LGVSVDDVTIAAILSAASNLRNREVGKQTHGYLIRHGIEFNG-MDNYLIDMYAKSGLIEA 1242
              +  + VT+A+IL A S + + ++GKQ HG+ IR  ++ N  + + L+DMY+K+G I+ 
Sbjct: 519  QNIRPNAVTVASILPACSQVGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKY 578

Query: 1243 AETIFKRNCKAGSDLALWNAMISGNTQNGLIEESLTIFRQMLEGNATPNAVTLASVLPAC 1422
            AE +F +  +  S    +  MI G  Q+G+ E ++++F  M E    P+A+   +VL AC
Sbjct: 579  AENMFSQTKERNS--VTYTTMILGYGQHGMGERAISLFLSMQELGIKPDAIAFVAVLSAC 636

Query: 1423 S 1425
            S
Sbjct: 637  S 637



 Score =  169 bits (427), Expect = 2e-39
 Identities = 126/473 (26%), Positives = 230/473 (48%), Gaps = 18/473 (3%)
 Frame = +1

Query: 1    RQLFDAIPEPTTVVWNTLMIGHICNNMPHEAISLYSRLFCAVNSSDDRKCDAYTYSSVLK 180
            R++FD+  E    VWNT++  ++ N+   E+I L    F     S +   D  T+     
Sbjct: 275  RRVFDSCVERNIEVWNTMIGVYVQNDCLVESIEL----FLEAIGSKEIVSDEVTFLLAAS 330

Query: 181  ACADTKQLSIGKAVHCHVLRSGLYTSRIVHNSLLNMYTTCLLRSGCDLVKR---VFRTMR 351
            A +  +Q+ +G+  H  V ++      ++ NSL+ MY      S C  V++   VF +MR
Sbjct: 331  AVSGLQQVELGRQFHGFVSKNFRELPIVIINSLMVMY------SRCGFVQKSFGVFHSMR 384

Query: 352  RRNVVSWNIMIAWYAKTGRYSEAVRHLEMMKRAGFTPSVVSFVNLFPAVSGLGDIDIANV 531
             R+VVSWN MI+ + + G   E +  +  M++ GF    ++   L  A S L + +I   
Sbjct: 385  ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQ 444

Query: 532  VYGMVTKLGDDYVNDLFVVSSAITMYAELGCVDFARQIFDNC--FKKNAHVWNTMIGGYV 705
             +G + + G  +     + S  I MYA+ G +  ++++F+     +++   WN+MI GY 
Sbjct: 445  THGFLIRQGIQFEG---MNSYLIDMYAKSGLIRISQKLFEGSGYAERDQATWNSMISGYT 501

Query: 706  QNNHPIAAIELFIMALEAQDGGNVDDVTFLSALSAASELQQLNVAQQLHSYLIKKSLVSS 885
            QN H      +F   LE     N   VT  S L A S++  +++ +QLH + I++ L  +
Sbjct: 502  QNGHTEETFLVFRKMLEQNIRPNA--VTVASILPACSQVGSVDLGKQLHGFSIRQYLDQN 559

Query: 886  VILLNAVIALYSRCNFIGDSFKVFSEMQERDVVSWNTMICALVQNGLDDEGLMLVYEMQK 1065
            V + +A++ +YS+   I  +  +FS+ +ER+ V++ TMI    Q+G+ +  + L   MQ+
Sbjct: 560  VFVASALVDMYSKAGAIKYAENMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQE 619

Query: 1066 LGVSVDDVTIAAILSAASNLRNREVGKQTHGYLIRHGIE-FNGM----------DNY--L 1206
            LG+  D +   A+LSA S           +  L+  G++ F  M          ++Y  +
Sbjct: 620  LGIKPDAIAFVAVLSACS-----------YSGLVDEGLKIFEDMREVYNIQPSSEHYCCI 668

Query: 1207 IDMYAKSGLIEAAETIFKRNCKAGSDLALWNAMISGNTQNGLIEESLTIFRQM 1365
             DM  + G +  A    K   + G+   LW +++     +G +E + T+  ++
Sbjct: 669  TDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCRLHGELELAETVSERL 721



 Score =  118 bits (295), Expect = 4e-24
 Identities = 97/384 (25%), Positives = 179/384 (46%), Gaps = 16/384 (4%)
 Frame = +1

Query: 322  LVKRVFRTMRRRNVVSWNIMIAWYAKTGRYSEAVRHLEMMKR-AGFTP-SVVSFVNLFPA 495
            L +++F  + +   V WN +I  +       EA+     MK+ A FT     ++ +   A
Sbjct: 57   LARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTKCDAYTYSSTLKA 116

Query: 496  VSGLGDIDIANVVYGMVTKLGDDYVNDLFVVSSAITMY--------AELGC--VDFARQI 645
             +   ++     V+  + +   +  +   V +S + MY        +EL C   D  R++
Sbjct: 117  CAETKNLKAGKAVHCHLIRCLQN--SSRVVHNSLMNMYVSCLNAPGSELDCFEYDVVRKV 174

Query: 646  FDNCFKKNAHVWNTMIGGYVQNNHPIAAIELFIMALEAQDGGNVDDVTFLSALSAASELQ 825
            FDN  +KN   WNT+I  YV+      A   F + +  +       V+F++   A +  +
Sbjct: 175  FDNMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRMEI--KPSPVSFVNVFPAVATSR 232

Query: 826  QLNVAQQLHSYLIK--KSLVSSVILLNAVIALYSRCNFIGDSFKVFSEMQERDVVSWNTM 999
             +  A   +  ++K     V  + ++++ I++Y+    +  S +VF    ER++  WNTM
Sbjct: 233  SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVWNTM 292

Query: 1000 ICALVQNGLDDEGLMLVYE-MQKLGVSVDDVTIAAILSAASNLRNREVGKQTHGYLIRHG 1176
            I   VQN    E + L  E +    +  D+VT     SA S L+  E+G+Q HG++ ++ 
Sbjct: 293  IGVYVQNDCLVESIELFLEAIGSKEIVSDEVTFLLAASAVSGLQQVELGRQFHGFVSKNF 352

Query: 1177 IEFN-GMDNYLIDMYAKSGLIEAAETIFKRNCKAGSDLALWNAMISGNTQNGLIEESLTI 1353
             E    + N L+ MY++ G ++ +  +F  +     D+  WN MIS   QNGL +E L +
Sbjct: 353  RELPIVIINSLMVMYSRCGFVQKSFGVF--HSMRERDVVSWNTMISAFVQNGLDDEGLML 410

Query: 1354 FRQMLEGNATPNAVTLASVLPACS 1425
              +M +     + +T+ ++L A S
Sbjct: 411  VYEMQKQGFKIDYITVTALLSAAS 434



 Score =  101 bits (252), Expect = 4e-19
 Identities = 71/274 (25%), Positives = 132/274 (48%), Gaps = 13/274 (4%)
 Frame = +1

Query: 586  VSSAITMYAELGCVDFARQIFDNCFKKNAHVWNTMIGGYVQNNHPIAAIELFIMALEAQD 765
            + S ++   + G    ARQ+FD   K    +WNT+I G++ NN P  A+  +    +   
Sbjct: 42   IRSRLSKICQEGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAP 101

Query: 766  GGNVDDVTFLSALSAASELQQLNVAQQLHSYLIKKSLVSSVILLNAVIALYSRC-NFIGD 942
                D  T+ S L A +E + L   + +H +LI+    SS ++ N+++ +Y  C N  G 
Sbjct: 102  FTKCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGS 161

Query: 943  SF---------KVFSEMQERDVVSWNTMICALVQNGLDDEGLMLVYEMQKLGVSVDDVTI 1095
                       KVF  M+ ++VV+WNT+I   V+ G + E       M ++ +    V+ 
Sbjct: 162  ELDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSF 221

Query: 1096 AAILSAASNLRNREVGKQTHGYLIRHGIEFNG---MDNYLIDMYAKSGLIEAAETIFKRN 1266
              +  A +  R+ +     +G +++ G E+     + +  I MYA+ G +E++  +F  +
Sbjct: 222  VNVFPAVATSRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFD-S 280

Query: 1267 CKAGSDLALWNAMISGNTQNGLIEESLTIFRQML 1368
            C    ++ +WN MI    QN  + ES+ +F + +
Sbjct: 281  C-VERNIEVWNTMIGVYVQNDCLVESIELFLEAI 313