BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00006812
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304638.1| predicted protein [Populus trichocarpa] gi|2...   164   6e-39
sp|P49729.1|UCRI1_TOBAC RecName: Full=Cytochrome b-c1 complex su...   163   2e-38
sp|P51132.1|UCRI2_TOBAC RecName: Full=Cytochrome b-c1 complex su...   160   9e-38
sp|P51133.1|UCRI3_TOBAC RecName: Full=Cytochrome b-c1 complex su...   156   2e-36
ref|XP_002297879.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36

>ref|XP_002304638.1| predicted protein [Populus trichocarpa] gi|222842070|gb|EEE79617.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  164 bits (416), Expect = 6e-39
 Identities = 86/143 (60%), Positives = 102/143 (71%)
 Frame = +3

Query: 108 MLRVAGXXXXXXXXXXGQTSSAAFVSGNPLIAVDPSSDGRTAPISSPAHSFSLINSFPNH 287
           MLRVAG           QT+SA     +P ++    S   +  I SP H    ++  P+ 
Sbjct: 1   MLRVAGRRLSSLPWRCSQTTSAFVSQNSPFLSDGRDSAASSRSILSPYH----LSFTPDL 56

Query: 288 VRGFSSNSLAPGQDIGMIPNIPGTVAAIKNPSPKIVYDEHNHERYPPGDPSKRAFAYFVL 467
           +RGFSS +L PGQD+G+I ++P TVAA+KNP+ KIVYDEHNHERYPPGDPSKRAFAYFVL
Sbjct: 57  IRGFSSGALTPGQDMGIISDLPATVAAVKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVL 116

Query: 468 TGGRFVYASLARLLVLKFVLSMS 536
           TGGRFVYASL RLLVLKFVLSMS
Sbjct: 117 TGGRFVYASLIRLLVLKFVLSMS 139


>sp|P49729.1|UCRI1_TOBAC RecName: Full=Cytochrome b-c1 complex subunit Rieske-1,
           mitochondrial; AltName: Full=Complex III subunit 5-1;
           AltName: Full=Rieske iron-sulfur protein 1; Short=RISP1;
           AltName: Full=Ubiquinol-cytochrome c reductase
           iron-sulfur subunit 1; Flags: Precursor
           gi|170322|gb|AAA34112.1| Rieske Fe-S protein, partial
           [Nicotiana tabacum]
          Length = 258

 Score =  163 bits (412), Expect = 2e-38
 Identities = 83/124 (66%), Positives = 98/124 (79%)
 Frame = +3

Query: 165 SSAAFVSGNPLIAVDPSSDGRTAPISSPAHSFSLINSFPNHVRGFSSNSLAPGQDIGMIP 344
           SS+AF+S N   + D SS  R+        S SL + F +H RGFSSNS++P  D+G++P
Sbjct: 9   SSSAFISANHFSSDDDSSSPRSI-------SPSLASVFLHHTRGFSSNSVSPAHDMGLVP 61

Query: 345 NIPGTVAAIKNPSPKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLARLLVLKFV 524
           ++P TVAAIKNP+ KIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASL RLL+LKFV
Sbjct: 62  DLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLMRLLILKFV 121

Query: 525 LSMS 536
           LSMS
Sbjct: 122 LSMS 125


>sp|P51132.1|UCRI2_TOBAC RecName: Full=Cytochrome b-c1 complex subunit Rieske-2,
           mitochondrial; AltName: Full=Complex III subunit 5-2;
           AltName: Full=Rieske iron-sulfur protein 2; Short=RISP2;
           AltName: Full=Ubiquinol-cytochrome c reductase
           iron-sulfur subunit 2; Flags: Precursor
           gi|530052|gb|AAA20831.1| Rieske iron-sulfur protein
           [Nicotiana tabacum]
          Length = 272

 Score =  160 bits (406), Expect = 9e-38
 Identities = 87/146 (59%), Positives = 105/146 (71%), Gaps = 3/146 (2%)
 Frame = +3

Query: 108 MLRVAGXXXXXXXXXXGQT---SSAAFVSGNPLIAVDPSSDGRTAPISSPAHSFSLINSF 278
           MLR+AG           ++   SS+AF+S N   + D SS  R+        S SL + F
Sbjct: 1   MLRIAGRRASSLSRWPVRSVAPSSSAFISANHFSSDDDSSSPRSI-------SPSLASVF 53

Query: 279 PNHVRGFSSNSLAPGQDIGMIPNIPGTVAAIKNPSPKIVYDEHNHERYPPGDPSKRAFAY 458
            +H RGFSSNS++   D+G++P++P TVAAIKNP+ KIVYDEHNHERYPPGDPSKRAFAY
Sbjct: 54  LHHTRGFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAY 113

Query: 459 FVLTGGRFVYASLARLLVLKFVLSMS 536
           FVLTGGRFVYASL RLL+LKFVLSMS
Sbjct: 114 FVLTGGRFVYASLVRLLILKFVLSMS 139


>sp|P51133.1|UCRI3_TOBAC RecName: Full=Cytochrome b-c1 complex subunit Rieske-3,
           mitochondrial; AltName: Full=Complex III subunit 5-3;
           AltName: Full=Rieske iron-sulfur protein 3; Short=RISP3;
           AltName: Full=Ubiquinol-cytochrome c reductase
           iron-sulfur subunit 3; Flags: Precursor
           gi|530053|gb|AAA20832.1| Rieske iron-sulfur protein
           [Nicotiana tabacum]
          Length = 268

 Score =  156 bits (395), Expect = 2e-36
 Identities = 86/143 (60%), Positives = 100/143 (69%)
 Frame = +3

Query: 108 MLRVAGXXXXXXXXXXGQTSSAAFVSGNPLIAVDPSSDGRTAPISSPAHSFSLINSFPNH 287
           MLR+AG             SS+AF + NP    D SS    +P  SPA   SL + F + 
Sbjct: 1   MLRIAGRKLSSSA---ATRSSSAFFTRNPFTFTDDSSSPARSP--SPA---SLASQFLDQ 52

Query: 288 VRGFSSNSLAPGQDIGMIPNIPGTVAAIKNPSPKIVYDEHNHERYPPGDPSKRAFAYFVL 467
            RGFSSNS++P    G++ ++P TVAAIKNPS KIVYD+ NHERYPPGDPSKRAFAYFVL
Sbjct: 53  FRGFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVL 112

Query: 468 TGGRFVYASLARLLVLKFVLSMS 536
           TGGRFVYASL RLL+LKFVLSMS
Sbjct: 113 TGGRFVYASLVRLLILKFVLSMS 135


>ref|XP_002297879.1| predicted protein [Populus trichocarpa] gi|222845137|gb|EEE82684.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score =  156 bits (394), Expect = 2e-36
 Identities = 88/146 (60%), Positives = 103/146 (70%), Gaps = 3/146 (2%)
 Frame = +3

Query: 108 MLRVAGXXXXXXXXXXGQT-SSAAFVSGNPLIAVDPSSDGRTA--PISSPAHSFSLINSF 278
           MLRVAG           Q+ +++AFVS N     D   D   +  PI SP + FS     
Sbjct: 1   MLRVAGRRLSSLPWRSSQSQTTSAFVSRNTAFVSDDGRDSAASSRPILSP-YQFSFP--- 56

Query: 279 PNHVRGFSSNSLAPGQDIGMIPNIPGTVAAIKNPSPKIVYDEHNHERYPPGDPSKRAFAY 458
           P+ +RGFSS +L  G D+G+I ++P TVAA+KNP+ KIVYDEHNHERYPPGDPSKRAFAY
Sbjct: 57  PDLIRGFSSGALTSGHDMGIISDLPPTVAAVKNPTSKIVYDEHNHERYPPGDPSKRAFAY 116

Query: 459 FVLTGGRFVYASLARLLVLKFVLSMS 536
           FVLTGGRFVYASL RLLVLKFVLSMS
Sbjct: 117 FVLTGGRFVYASLIRLLVLKFVLSMS 142