BLASTX nr result

ID: Scutellaria23_contig00006511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00006511
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containi...    88   8e-16
emb|CBI40338.3| unnamed protein product [Vitis vinifera]               88   8e-16
emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]    88   8e-16
ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
ref|XP_002515835.1| pentatricopeptide repeat-containing protein,...    82   6e-14

>ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 42/78 (53%), Positives = 54/78 (69%)
 Frame = +2

Query: 14  GMSVHALALVSGYTNSNVFVGNAAIAMYGRCGAYDKAHQLFDEMLERDVFDTISWNSIIS 193
           G SVHA+   SG+   NVFVGN  ++MYGRCGA++ A Q+FDEM ER V D +SWNSI++
Sbjct: 145 GASVHAVVFASGF-EWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVA 203

Query: 194 VCALAGELRRAFRMFEEM 247
                G+  RA +MFE M
Sbjct: 204 AYMQGGDSIRAMKMFERM 221



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/78 (37%), Positives = 48/78 (61%)
 Frame = +2

Query: 14  GMSVHALALVSGYTNSNVFVGNAAIAMYGRCGAYDKAHQLFDEMLERDVFDTISWNSIIS 193
           G  VH  AL SG    +VFVGNA + MY +CG  ++A+++F+ M  +DV   +SWN++++
Sbjct: 250 GKQVHGYALRSGLFE-DVFVGNAVVDMYAKCGMMEEANKVFERMKVKDV---VSWNAMVT 305

Query: 194 VCALAGELRRAFRMFEEM 247
             +  G    A  +FE++
Sbjct: 306 GYSQIGRFDDALGLFEKI 323


>emb|CBI40338.3| unnamed protein product [Vitis vinifera]
          Length = 487

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 42/78 (53%), Positives = 54/78 (69%)
 Frame = +2

Query: 14  GMSVHALALVSGYTNSNVFVGNAAIAMYGRCGAYDKAHQLFDEMLERDVFDTISWNSIIS 193
           G SVHA+   SG+   NVFVGN  ++MYGRCGA++ A Q+FDEM ER V D +SWNSI++
Sbjct: 145 GASVHAVVFASGF-EWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVA 203

Query: 194 VCALAGELRRAFRMFEEM 247
                G+  RA +MFE M
Sbjct: 204 AYMQGGDSIRAMKMFERM 221



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/78 (37%), Positives = 48/78 (61%)
 Frame = +2

Query: 14  GMSVHALALVSGYTNSNVFVGNAAIAMYGRCGAYDKAHQLFDEMLERDVFDTISWNSIIS 193
           G  VH  AL SG    +VFVGNA + MY +CG  ++A+++F+ M  +DV   +SWN++++
Sbjct: 250 GKQVHGYALRSGLFE-DVFVGNAVVDMYAKCGMMEEANKVFERMKVKDV---VSWNAMVT 305

Query: 194 VCALAGELRRAFRMFEEM 247
             +  G    A  +FE++
Sbjct: 306 GYSQIGRFDDALGLFEKI 323


>emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 42/78 (53%), Positives = 54/78 (69%)
 Frame = +2

Query: 14  GMSVHALALVSGYTNSNVFVGNAAIAMYGRCGAYDKAHQLFDEMLERDVFDTISWNSIIS 193
           G SVHA+   SG+   NVFVGN  ++MYGRCGA++ A Q+FDEM ER V D +SWNSI++
Sbjct: 164 GASVHAVVFASGF-EWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVA 222

Query: 194 VCALAGELRRAFRMFEEM 247
                G+  RA +MFE M
Sbjct: 223 AYMQGGDSIRAMKMFERM 240



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/78 (37%), Positives = 48/78 (61%)
 Frame = +2

Query: 14  GMSVHALALVSGYTNSNVFVGNAAIAMYGRCGAYDKAHQLFDEMLERDVFDTISWNSIIS 193
           G  VH  AL SG    +VFVGNA + MY +CG  ++A+++F+ M  +DV   +SWN++++
Sbjct: 269 GKQVHGYALRSGLFE-DVFVGNAVVDMYAKCGMMEEANKVFERMKVKDV---VSWNAMVT 324

Query: 194 VCALAGELRRAFRMFEEM 247
             +  G    A  +FE++
Sbjct: 325 GYSQIGRFDDALGLFEKI 342


>ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
           gi|449479088|ref|XP_004155501.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/74 (52%), Positives = 52/74 (70%)
 Frame = +2

Query: 14  GMSVHALALVSGYTNSNVFVGNAAIAMYGRCGAYDKAHQLFDEMLERDVFDTISWNSIIS 193
           G SVHA+   +G   SNVF+ N+ +AMYGRCGA D AHQ+FDE+LER + D +SWNSI++
Sbjct: 146 GASVHAIVCANGL-GSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILA 204

Query: 194 VCALAGELRRAFRM 235
                G+ R A R+
Sbjct: 205 AYVQGGQSRTALRI 218


>ref|XP_002515835.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544990|gb|EEF46504.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 655

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/78 (48%), Positives = 54/78 (69%)
 Frame = +2

Query: 14  GMSVHALALVSGYTNSNVFVGNAAIAMYGRCGAYDKAHQLFDEMLERDVFDTISWNSIIS 193
           G  +HA+   +G+ +SNVFV NA +AMYGRCGA   A Q+FDE+L  +VFD +SWNS+I+
Sbjct: 158 GSCIHAIVCSTGF-DSNVFVCNAVVAMYGRCGASSYARQMFDELLMGEVFDLVSWNSMIA 216

Query: 194 VCALAGELRRAFRMFEEM 247
           V   +G+L+    +F  M
Sbjct: 217 VYLQSGDLKSGIELFRRM 234


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