BLASTX nr result

ID: Scutellaria23_contig00006483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00006483
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P19683.1|ROC4_NICSY RecName: Full=31 kDa ribonucleoprotein, c...   142   3e-32
emb|CAD18921.1| RNA-binding protein precursor [Persea americana]      141   6e-32
ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative [Ri...   139   2e-31
emb|CBI34828.3| unnamed protein product [Vitis vinifera]              139   2e-31
ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   139   2e-31

>sp|P19683.1|ROC4_NICSY RecName: Full=31 kDa ribonucleoprotein, chloroplastic; Flags:
           Precursor gi|19741|emb|CAA40364.1| 31kD chloroplast
           ribonucleoprotein [Nicotiana sylvestris]
           gi|19756|emb|CAA37885.1| unnamed protein product
           [Nicotiana sylvestris]
          Length = 315

 Score =  142 bits (358), Expect = 3e-32
 Identities = 71/89 (79%), Positives = 77/89 (86%), Gaps = 3/89 (3%)
 Frame = +3

Query: 3   STVEEADKAVRMFNRYDFNGRLLTVNIAAQKGTRP---PRVFEPSYRIYVGNLPWSADDA 173
           STVEEA+KAV M+NRYD NGRLLTVN AA++G RP   PR FE SYRIYVGN+PW  DDA
Sbjct: 185 STVEEAEKAVEMYNRYDVNGRLLTVNKAARRGERPERPPRTFEQSYRIYVGNIPWGIDDA 244

Query: 174 RLEQLFSEHGKVVSARVVSDRDTGRSRGF 260
           RLEQLFSEHGKVVSARVV DR+TGRSRGF
Sbjct: 245 RLEQLFSEHGKVVSARVVYDRETGRSRGF 273


>emb|CAD18921.1| RNA-binding protein precursor [Persea americana]
          Length = 300

 Score =  141 bits (355), Expect = 6e-32
 Identities = 69/89 (77%), Positives = 76/89 (85%), Gaps = 3/89 (3%)
 Frame = +3

Query: 3   STVEEADKAVRMFNRYDFNGRLLTVNIAAQKGTR---PPRVFEPSYRIYVGNLPWSADDA 173
           STVEEA+KAV MFNRYD NGRLLTVN AA +G R   PPR FEP++R+YVGNLPW  DDA
Sbjct: 170 STVEEAEKAVEMFNRYDINGRLLTVNKAAPRGARVDRPPRAFEPAFRMYVGNLPWQVDDA 229

Query: 174 RLEQLFSEHGKVVSARVVSDRDTGRSRGF 260
           RLEQ+FSEHGKVV ARVV DR+TGRSRGF
Sbjct: 230 RLEQVFSEHGKVVEARVVYDRETGRSRGF 258


>ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223550401|gb|EEF51888.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 319

 Score =  139 bits (351), Expect = 2e-31
 Identities = 69/89 (77%), Positives = 77/89 (86%), Gaps = 3/89 (3%)
 Frame = +3

Query: 3   STVEEADKAVRMFNRYDFNGRLLTVNIAAQKGTRP---PRVFEPSYRIYVGNLPWSADDA 173
           STVEEA+KAV MF+R+D +GRLLTVN AA +G+RP   PRVFEP YRIYVGNLPW  D+A
Sbjct: 190 STVEEAEKAVEMFHRHDLDGRLLTVNKAAPRGSRPERPPRVFEPGYRIYVGNLPWDVDNA 249

Query: 174 RLEQLFSEHGKVVSARVVSDRDTGRSRGF 260
           RLEQ+FSEHGKVV ARVV DRDTGRSRGF
Sbjct: 250 RLEQIFSEHGKVVDARVVYDRDTGRSRGF 278


>emb|CBI34828.3| unnamed protein product [Vitis vinifera]
          Length = 272

 Score =  139 bits (350), Expect = 2e-31
 Identities = 69/89 (77%), Positives = 75/89 (84%), Gaps = 3/89 (3%)
 Frame = +3

Query: 3   STVEEADKAVRMFNRYDFNGRLLTVNIAAQKGTRP---PRVFEPSYRIYVGNLPWSADDA 173
           STVEEA+KAV MFNRYD NGR LTVN AA +G+RP   P+ FEPS+RIYVGNLPW  DDA
Sbjct: 142 STVEEAEKAVEMFNRYDLNGRFLTVNKAAPRGSRPERPPQAFEPSFRIYVGNLPWQVDDA 201

Query: 174 RLEQLFSEHGKVVSARVVSDRDTGRSRGF 260
           RLEQ+FSEHGKVV ARVV DRDT RSRGF
Sbjct: 202 RLEQVFSEHGKVVDARVVYDRDTQRSRGF 230


>ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Vitis
           vinifera]
          Length = 312

 Score =  139 bits (350), Expect = 2e-31
 Identities = 69/89 (77%), Positives = 75/89 (84%), Gaps = 3/89 (3%)
 Frame = +3

Query: 3   STVEEADKAVRMFNRYDFNGRLLTVNIAAQKGTRP---PRVFEPSYRIYVGNLPWSADDA 173
           STVEEA+KAV MFNRYD NGR LTVN AA +G+RP   P+ FEPS+RIYVGNLPW  DDA
Sbjct: 182 STVEEAEKAVEMFNRYDLNGRFLTVNKAAPRGSRPERPPQAFEPSFRIYVGNLPWQVDDA 241

Query: 174 RLEQLFSEHGKVVSARVVSDRDTGRSRGF 260
           RLEQ+FSEHGKVV ARVV DRDT RSRGF
Sbjct: 242 RLEQVFSEHGKVVDARVVYDRDTQRSRGF 270


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