BLASTX nr result

ID: Scutellaria23_contig00006404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00006404
         (1057 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264869.2| PREDICTED: 50S ribosomal protein L19, chloro...   200   4e-49
emb|CAN82787.1| hypothetical protein VITISV_037813 [Vitis vinifera]   197   3e-48
ref|NP_567531.1| 50S ribosomal protein L19-1 [Arabidopsis thalia...   192   1e-46
ref|XP_004147231.1| PREDICTED: 50S ribosomal protein L19, chloro...   191   3e-46
ref|XP_002870097.1| ribosomal protein L19 family protein [Arabid...   190   6e-46

>ref|XP_002264869.2| PREDICTED: 50S ribosomal protein L19, chloroplastic [Vitis
           vinifera] gi|296088907|emb|CBI38456.3| unnamed protein
           product [Vitis vinifera]
          Length = 231

 Score =  200 bits (509), Expect = 4e-49
 Identities = 122/226 (53%), Positives = 139/226 (61%), Gaps = 12/226 (5%)
 Frame = -2

Query: 948 VPQALFTVPRTSAHCQPKNLAFSAVVSRRPSTGGLVSRVSTRFNGLSFGERDR------N 787
           +PQALF  PR+S    PK L  S   S R S+  L    ++RF+  SF    R       
Sbjct: 6   LPQALFITPRSSNQWPPKKLGLSTFPSPRSSSLNLNRLSTSRFSSNSFAFHFRPIVVSPK 65

Query: 786 SSFSVRXXXXXXXXXXXXXXXXXE-IADSLELEAPLD-----KPLTKPRVKLGDIMGILN 625
             F VR                 E      E E  LD     KP  KPRVKLGDIMGILN
Sbjct: 66  RFFIVRAEADNEGELGADENTEEEETVSETESEVKLDAEDEAKPPRKPRVKLGDIMGILN 125

Query: 624 KQAIEASDERRITPDLRVGDVVEIKLEVPENRRRLSVYKGIIMSKQNAGIHTTXXXXXXX 445
           K+AIEAS++ R  PDLR GD+VEIKLEVPENRRRLS+YKGI++SKQNAGIHTT       
Sbjct: 126 KRAIEASEKERPVPDLRTGDIVEIKLEVPENRRRLSIYKGIVISKQNAGIHTTIRVRRII 185

Query: 444 XXXXXXXVFPVYSPNIKEIRVLSHRKVRRAKLYYLRDKLPRLSTFK 307
                  VFPVYSPNIKEI+V++HRKVRRA+LYYLRDKLPRLSTFK
Sbjct: 186 AGVGVEIVFPVYSPNIKEIKVVNHRKVRRARLYYLRDKLPRLSTFK 231


>emb|CAN82787.1| hypothetical protein VITISV_037813 [Vitis vinifera]
          Length = 231

 Score =  197 bits (502), Expect = 3e-48
 Identities = 119/226 (52%), Positives = 138/226 (61%), Gaps = 12/226 (5%)
 Frame = -2

Query: 948 VPQALFTVPRTSAHCQPKNLAFSAVVSRRPSTGGLVSRVSTRFNGLSFGERDRNSSFSVR 769
           +PQALF  PR+S    PK L  S   S R  +  L    ++RF+  SF    R    S +
Sbjct: 6   LPQALFITPRSSNQXPPKKLGLSTFPSPRSXSLNLNRLSTSRFSSNSFXFHFRPIVVSPK 65

Query: 768 XXXXXXXXXXXXXXXXXE-------IADSLELEAPLD-----KPLTKPRVKLGDIMGILN 625
                            +            E E  LD     KP  KPRVKLGDIMGILN
Sbjct: 66  RFFIVXAEADNEGELGPDENTEEEETVSETESEVKLDAEDEAKPPRKPRVKLGDIMGILN 125

Query: 624 KQAIEASDERRITPDLRVGDVVEIKLEVPENRRRLSVYKGIIMSKQNAGIHTTXXXXXXX 445
           K+AIEAS++ R  PDLR GD+VEIKLEVPENRRRLS+YKGI++SKQNAGIHTT       
Sbjct: 126 KRAIEASEKERPVPDLRTGDIVEIKLEVPENRRRLSIYKGIVISKQNAGIHTTIRVRRII 185

Query: 444 XXXXXXXVFPVYSPNIKEIRVLSHRKVRRAKLYYLRDKLPRLSTFK 307
                  VFPVYSPNIKEI+V++HRKVRRA+LYYLRDKLPRLSTFK
Sbjct: 186 AGVGVEIVFPVYSPNIKEIKVVNHRKVRRARLYYLRDKLPRLSTFK 231


>ref|NP_567531.1| 50S ribosomal protein L19-1 [Arabidopsis thaliana]
           gi|75248729|sp|Q8W463.1|RK191_ARATH RecName: Full=50S
           ribosomal protein L19-1, chloroplastic; Flags: Precursor
           gi|17065490|gb|AAL32899.1| Unknown protein [Arabidopsis
           thaliana] gi|20148593|gb|AAM10187.1| unknown protein
           [Arabidopsis thaliana] gi|21554252|gb|AAM63327.1|
           contains similarity to plastid ribosomal protein L19
           [Arabidopsis thaliana] gi|332658510|gb|AEE83910.1| 50S
           ribosomal protein L19-1 [Arabidopsis thaliana]
          Length = 225

 Score =  192 bits (488), Expect = 1e-46
 Identities = 113/220 (51%), Positives = 137/220 (62%), Gaps = 6/220 (2%)
 Frame = -2

Query: 948 VPQALFTVPRTSAHCQPKNLAFSAVVSRRPSTGGL--VSRVSTRFNGLSFG----ERDRN 787
           +PQAL  +PR       KNL FS+ +S  PS      VSR+S    G  FG     R RN
Sbjct: 8   LPQALHMIPRNPTQSS-KNLGFSSFLSCAPSMDSRISVSRLSLNHPGSKFGFSLDTRVRN 66

Query: 786 SSFSVRXXXXXXXXXXXXXXXXXEIADSLELEAPLDKPLTKPRVKLGDIMGILNKQAIEA 607
             F VR                    +    E    KP  KPR+KLGD+MGILN++AIE 
Sbjct: 67  E-FIVRAEEGNTEAESEEFVAEIADTEGNVEEVVEAKPTRKPRIKLGDVMGILNQKAIEV 125

Query: 606 SDERRITPDLRVGDVVEIKLEVPENRRRLSVYKGIIMSKQNAGIHTTXXXXXXXXXXXXX 427
           +++ R  P++R GD+VEIKLEVPEN+RRLS+YKGI+MS+QNAGIHTT             
Sbjct: 126 AEKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVE 185

Query: 426 XVFPVYSPNIKEIRVLSHRKVRRAKLYYLRDKLPRLSTFK 307
            VFP+YSPNIKEI+V+SHRKVRRA+LYYLRDKLPRLSTFK
Sbjct: 186 IVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 225


>ref|XP_004147231.1| PREDICTED: 50S ribosomal protein L19, chloroplastic-like [Cucumis
           sativus] gi|449523724|ref|XP_004168873.1| PREDICTED: 50S
           ribosomal protein L19, chloroplastic-like [Cucumis
           sativus]
          Length = 221

 Score =  191 bits (485), Expect = 3e-46
 Identities = 112/218 (51%), Positives = 141/218 (64%), Gaps = 4/218 (1%)
 Frame = -2

Query: 948 VPQALFTVPRTSAHCQPKNLAF-SAVVSRRPSTGGLVSR-VSTRFNGLSFGERDRNSSFS 775
           +PQA+ ++PR    C P+ L F SAV   R S   L S  + + F+        R  +F 
Sbjct: 6   LPQAVISIPRNPNQCAPRRLGFCSAVSGTRVSFSTLSSSSIGSHFHHTVAAPLRR--AFV 63

Query: 774 VRXXXXXXXXXXXXXXXXXEIADSLELEAPLD--KPLTKPRVKLGDIMGILNKQAIEASD 601
           VR                 E+  ++E +A  +  KP  KPRVKLGD+MGILNK+AIEAS+
Sbjct: 64  VRAEANPEADSAAEEAPEAEVEAAVESDAQPEEEKPSRKPRVKLGDVMGILNKRAIEASE 123

Query: 600 ERRITPDLRVGDVVEIKLEVPENRRRLSVYKGIIMSKQNAGIHTTXXXXXXXXXXXXXXV 421
           + R  PD+R GD+VE+KLEV ENRRRLSVY+GI++SKQNAGIHTT              V
Sbjct: 124 KERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIV 183

Query: 420 FPVYSPNIKEIRVLSHRKVRRAKLYYLRDKLPRLSTFK 307
           FP+YSPNI+EIRV+SHRKVRRA+LYYLRDKLP+LSTFK
Sbjct: 184 FPLYSPNIREIRVVSHRKVRRARLYYLRDKLPKLSTFK 221


>ref|XP_002870097.1| ribosomal protein L19 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297315933|gb|EFH46356.1| ribosomal protein
           L19 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 225

 Score =  190 bits (482), Expect = 6e-46
 Identities = 110/219 (50%), Positives = 134/219 (61%), Gaps = 5/219 (2%)
 Frame = -2

Query: 948 VPQALFTVPRTSAHCQPKNLAFSAVVSRRPSTGGL--VSRVSTRFNGLSFG---ERDRNS 784
           +PQAL   PR       KNL FS+ +S  PS      VSR+S   +   FG   +     
Sbjct: 8   LPQALHMTPRNPTQSS-KNLGFSSFLSCAPSMNSRISVSRLSLNHSSSKFGFSLDTRVRK 66

Query: 783 SFSVRXXXXXXXXXXXXXXXXXEIADSLELEAPLDKPLTKPRVKLGDIMGILNKQAIEAS 604
            F VR                    +    E    KP  KPR+KLGD+MGILN++AIE S
Sbjct: 67  EFIVRVEEGNTEAESEEAVAEIADTEGNVEEVGEAKPQRKPRIKLGDVMGILNQRAIEVS 126

Query: 603 DERRITPDLRVGDVVEIKLEVPENRRRLSVYKGIIMSKQNAGIHTTXXXXXXXXXXXXXX 424
           ++ R  P++R GD+VEIKLEVPEN+RRLS+YKGI+MS+QNAGIHTT              
Sbjct: 127 EKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEI 186

Query: 423 VFPVYSPNIKEIRVLSHRKVRRAKLYYLRDKLPRLSTFK 307
           VFP+YSPNIKEI+V+SHRKVRRA+LYYLRDKLPRLSTFK
Sbjct: 187 VFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 225


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