BLASTX nr result
ID: Scutellaria23_contig00005598
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria23_contig00005598
(905 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [S... 49 7e-10
ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [S... 47 1e-09
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ... 46 1e-09
gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 ... 47 6e-09
gb|AAM52339.1| fertility restorer [Petunia x hybrida] 48 7e-09
>ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein
SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 49.3 bits (116), Expect(2) = 7e-10
Identities = 40/132 (30%), Positives = 70/132 (53%), Gaps = 3/132 (2%)
Frame = +2
Query: 179 TIVSLMHGYCTKGCVNEAWSLFLEA*-NGIL*HYAKGIILCTQL*YG-FKLFKEMQVPQL 352
T +L+HGYC G +++A+S+F E NGI ++ + +G FK + + +L
Sbjct: 556 TYNTLLHGYCRDGRIDDAYSVFQEMLSNGI----TPVVVTYNTILHGLFKTRRFSEAKEL 611
Query: 353 SSDKITHFYR*WKIKV*VPIY*HTISSLMD-FAKKRKLDMAKNLFNQLPPKCLQPKVITY 529
+ IT + W I +T + +++ +K +D A +F L K LQ +IT+
Sbjct: 612 YLNMITSGKQ-WSI--------YTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITF 662
Query: 530 NILIGAVCQDGQ 565
NI+IGA+ +DG+
Sbjct: 663 NIMIGALLKDGR 674
Score = 40.8 bits (94), Expect(2) = 7e-10
Identities = 17/38 (44%), Positives = 29/38 (76%)
Frame = +3
Query: 3 EGKVNEAEDVLKTMIHIDVQPNIITYSALIDGYCLLGK 116
EG+V +A+ ++ M + +P+II+Y+ALI G+CL+GK
Sbjct: 497 EGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGK 534
>ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein
SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 47.4 bits (111), Expect(2) = 1e-09
Identities = 17/38 (44%), Positives = 31/38 (81%)
Frame = +3
Query: 3 EGKVNEAEDVLKTMIHIDVQPNIITYSALIDGYCLLGK 116
EG+V EA+ ++ M+ +DV+P++I+Y+ L+DG+CL G+
Sbjct: 460 EGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGR 497
Score = 42.0 bits (97), Expect(2) = 1e-09
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Frame = +2
Query: 179 TIVSLMHGYCTKGCVNEAWSLFLEA*NGIL*HYAKGIILCTQL*YG-FKLFKEMQVPQLS 355
T +L+HGYC +++A+SLF E ++ G++ + +G F++ + + +L
Sbjct: 519 TYNTLLHGYCKARRIDDAYSLFREM---LMKGLTPGVVTYNTILHGLFQIGRFCEAKELY 575
Query: 356 SDKITHFYR*WKIKV*VPIY*HTISSLMDFAKKRKLDMAKNLFNQLPPKCLQPKVITYNI 535
+ I + + IY +TI L + +D A +F L K LQ + T NI
Sbjct: 576 LNMINNRRK-------CDIYTYTII-LNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINI 627
Query: 536 LIGAVCQDGQ 565
+IGA+ + G+
Sbjct: 628 MIGALLKGGR 637
>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 45.8 bits (107), Expect(2) = 1e-09
Identities = 17/38 (44%), Positives = 29/38 (76%)
Frame = +3
Query: 3 EGKVNEAEDVLKTMIHIDVQPNIITYSALIDGYCLLGK 116
EGK+ EA++V+ M+ V+P ++TY+ L+DGYCL+ +
Sbjct: 276 EGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNE 313
Score = 43.1 bits (100), Expect(2) = 1e-09
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 8/133 (6%)
Frame = +2
Query: 191 LMHGYCTKGCVNEAWSLFLE-A*NGIL*HYAK------GIILCTQL*YGFKLFKEMQVPQ 349
+++G+C V+EA LF E GI H G+ ++ Y ++L EM
Sbjct: 339 MINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNC 398
Query: 350 LSSDKITHFYR*WKIKV*VPIY*HTISSLMD-FAKKRKLDMAKNLFNQLPPKCLQPKVIT 526
+ +D +T+ +SL+D F K + +D A L ++ +QP + T
Sbjct: 399 IPADIVTY------------------NSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCT 440
Query: 527 YNILIGAVCQDGQ 565
YNILI +C+ GQ
Sbjct: 441 YNILIDGLCKGGQ 453
>gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 46.6 bits (109), Expect(2) = 6e-09
Identities = 41/139 (29%), Positives = 58/139 (41%), Gaps = 11/139 (7%)
Frame = +2
Query: 191 LMHGYCTKGCVNEAWSLFLEA*-NGIL*HYAKGIILCTQL*YGF----------KLFKEM 337
L+HG+C G VN A LF E NG+ + I+ C L G ++FK
Sbjct: 237 LIHGFCQVGNVNVAQDLFQEMISNGV----SPDIVTCNTLLAGLCENGKLEKALEMFKVF 292
Query: 338 QVPQLSSDKITHFYR*WKIKV*VPIY*HTISSLMDFAKKRKLDMAKNLFNQLPPKCLQPK 517
Q ++ D T + K K+D A +LFN LP ++
Sbjct: 293 QKSKMDLDTAT-----------------CNIIINGMCKGNKVDEAWDLFNSLPVNGVETD 335
Query: 518 VITYNILIGAVCQDGQASR 574
V+TYNILIG ++G R
Sbjct: 336 VVTYNILIGVFVKEGNFLR 354
Score = 40.4 bits (93), Expect(2) = 6e-09
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +3
Query: 3 EGKVNEAEDVLKTMIHIDVQPNIITYSALIDGYC 104
EGKV+ AE++ + M+ ++ P ITYS++IDG+C
Sbjct: 163 EGKVSGAEELYREMLRRNIFPTTITYSSMIDGFC 196
>gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 47.8 bits (112), Expect(2) = 7e-09
Identities = 20/38 (52%), Positives = 29/38 (76%)
Frame = +3
Query: 3 EGKVNEAEDVLKTMIHIDVQPNIITYSALIDGYCLLGK 116
EGKV +AE+++ MI V+PN ITY+ ++DGYCL G+
Sbjct: 296 EGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQ 333
Score = 38.9 bits (89), Expect(2) = 7e-09
Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 35/164 (21%)
Frame = +2
Query: 176 PTIVS---LMHGYCTKGCVNEAWSLFLE-A*NGIL*HYAKGIILCTQL*YGFK------- 322
P I+S L++GY K +++A LF E + NG+ I+ C+ L G
Sbjct: 351 PDIISYTALINGYVEKKKMDKAMQLFREISQNGL----KPSIVTCSVLLRGLFEVGRTEC 406
Query: 323 ---LFKEMQ----VPQLSS---------------DKITHFYR*WKIK--V*VPIY*HTIS 430
F EMQ +P L + + ++HF++ + + + IY I+
Sbjct: 407 AKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIN 466
Query: 431 SLMDFAKKRKLDMAKNLFNQLPPKCLQPKVITYNILIGAVCQDG 562
L K KLD A F +LP L P VITY +I CQ+G
Sbjct: 467 GL---CKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEG 507